RNA–Protein interactions for RNA: ENSMUST00000119350.1

Hmgb1-ps1-201, mousemouse

BASIC

Gene Hmgb1-ps1, Length 634 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-ps1-201ENSMUST00000119350 TprnA2AI08 749 aaKnown RBP7.75□□□□□ -1.17
Hmgb1-ps1-201ENSMUST00000119350 Slc4a2P13808 1237 aaKnown RBP7.75□□□□□ -1.17
Hmgb1-ps1-201ENSMUST00000119350 Ccdc96Q9CR92 584 aa7.75□□□□□ -1.17
Hmgb1-ps1-201ENSMUST00000119350 Thoc2B1AZI6 1594 aaKnown RBP7.73□□□□□ -1.17
Hmgb1-ps1-201ENSMUST00000119350 Sox12Q04890 314 aa7.73□□□□□ -1.17
Hmgb1-ps1-201ENSMUST00000119350 Ppp1r37Q8BKR5 712 aa7.73□□□□□ -1.17
Hmgb1-ps1-201ENSMUST00000119350 Rsph6aQ8CDR2 708 aa7.73□□□□□ -1.17
Hmgb1-ps1-201ENSMUST00000119350 Noa1Q9JJG9 693 aaKnown RBP7.73□□□□□ -1.17
Hmgb1-ps1-201ENSMUST00000119350 PrkcshO08795 521 aa7.71□□□□□ -1.18
Hmgb1-ps1-201ENSMUST00000119350 ChgaP26339 463 aaKnown RBP7.71□□□□□ -1.18
Hmgb1-ps1-201ENSMUST00000119350 Ferd3lQ923Z4 168 aa7.71□□□□□ -1.18
Hmgb1-ps1-201ENSMUST00000119350 Dcaf1Q80TR8 1506 aa7.71□□□□□ -1.18
Hmgb1-ps1-201ENSMUST00000119350 Brpf1B2RRD7 1212 aa7.69□□□□□ -1.18
Hmgb1-ps1-201ENSMUST00000119350 Aplp2Q06335 707 aa7.69□□□□□ -1.18
Hmgb1-ps1-201ENSMUST00000119350 MycnP03966 462 aaKnown RBP7.68□□□□□ -1.18
Hmgb1-ps1-201ENSMUST00000119350 Zc3h15Q3TIV5 426 aaKnown RBP7.68□□□□□ -1.18
Hmgb1-ps1-201ENSMUST00000119350 Fbxo3Q9DC63 480 aa7.68□□□□□ -1.18
Hmgb1-ps1-201ENSMUST00000119350 Dhx30Q99PU8 1217 aaKnown RBP7.67□□□□□ -1.18
Hmgb1-ps1-201ENSMUST00000119350 TimelessQ9R1X4 1197 aa7.67□□□□□ -1.18
Hmgb1-ps1-201ENSMUST00000119350 Npm1Q61937 292 aaKnown RBP7.66□□□□□ -1.18
Hmgb1-ps1-201ENSMUST00000119350 Plcd4Q8K3R3 807 aa7.65□□□□□ -1.18
Hmgb1-ps1-201ENSMUST00000119350 Gm13695A2AK44 830 aa7.64□□□□□ -1.19
Hmgb1-ps1-201ENSMUST00000119350 Map4k4P97820 1233 aaKnown RBP7.64□□□□□ -1.19
Hmgb1-ps1-201ENSMUST00000119350 Atad2bE9Q166 1460 aaKnown RBP7.62□□□□□ -1.19
Hmgb1-ps1-201ENSMUST00000119350 Rgl2Q61193 778 aa7.62□□□□□ -1.19
Hmgb1-ps1-201ENSMUST00000119350 Cc2d2aQ8CFW7 1633 aa7.61□□□□□ -1.19
Hmgb1-ps1-201ENSMUST00000119350 Baz1bQ9Z277 1479 aa7.6□□□□□ -1.19
Hmgb1-ps1-201ENSMUST00000119350 Slc7a3P70423 618 aa7.59□□□□□ -1.19
Hmgb1-ps1-201ENSMUST00000119350 Ifnlr1Q8CGK5 535 aa7.59□□□□□ -1.19
Hmgb1-ps1-201ENSMUST00000119350 Ercc6F8VPZ5 1481 aa7.58□□□□□ -1.2
Hmgb1-ps1-201ENSMUST00000119350 NclP09405 707 aaKnown RBP7.58□□□□□ -1.2
Hmgb1-ps1-201ENSMUST00000119350 G430095P16RikE9Q913 147 aa7.56□□□□□ -1.2
Hmgb1-ps1-201ENSMUST00000119350 UncxO08934 530 aa7.56□□□□□ -1.2
Hmgb1-ps1-201ENSMUST00000119350 Fbln2P37889 1221 aa7.56□□□□□ -1.2
Hmgb1-ps1-201ENSMUST00000119350 Ric3Q8BPM6 367 aa7.56□□□□□ -1.2
Hmgb1-ps1-201ENSMUST00000119350 Ak7Q9D2H2 614 aa7.56□□□□□ -1.2
Hmgb1-ps1-201ENSMUST00000119350 Rhox8Q6VSS7 320 aa7.54□□□□□ -1.2
Hmgb1-ps1-201ENSMUST00000119350 Npm3Q9CPP0 175 aaKnown RBP7.54□□□□□ -1.2
Hmgb1-ps1-201ENSMUST00000119350 Hdac5Q9Z2V6 1113 aa7.54□□□□□ -1.2
Hmgb1-ps1-201ENSMUST00000119350 Gtf3c3Q3TMP1 882 aa7.52□□□□□ -1.21
Hmgb1-ps1-201ENSMUST00000119350 Arhgef1Q61210 920 aaKnown RBP7.52□□□□□ -1.21
Hmgb1-ps1-201ENSMUST00000119350 Rb1cc1Q9ESK9 1588 aa7.51□□□□□ -1.21
Hmgb1-ps1-201ENSMUST00000119350 Phldb1Q6PDH0 1371 aaKnown RBP7.51□□□□□ -1.21
Hmgb1-ps1-201ENSMUST00000119350 Kiaa1211Q5PR69 1207 aa7.51□□□□□ -1.21
Hmgb1-ps1-201ENSMUST00000119350 Plcd3Q8K2J0 785 aa7.51□□□□□ -1.21
Hmgb1-ps1-201ENSMUST00000119350 Ubl4bQ9CQ84 188 aa7.51□□□□□ -1.21
Hmgb1-ps1-201ENSMUST00000119350 Crybg2B7ZCC2 1516 aa7.51□□□□□ -1.21
Hmgb1-ps1-201ENSMUST00000119350 Fam135aQ6NS59 1506 aa7.51□□□□□ -1.21
Hmgb1-ps1-201ENSMUST00000119350 Slc24a3Q99PD7 645 aa7.49□□□□□ -1.21
Hmgb1-ps1-201ENSMUST00000119350 Stk25Q9Z2W1 426 aa7.49□□□□□ -1.21
Hmgb1-ps1-201ENSMUST00000119350 Rnf216P58283 853 aa7.47□□□□□ -1.21
Hmgb1-ps1-201ENSMUST00000119350 PrimpolQ6P1E7 537 aa7.45□□□□□ -1.22
Hmgb1-ps1-201ENSMUST00000119350 Fam117aQ7TNF9 451 aa7.45□□□□□ -1.22
Hmgb1-ps1-201ENSMUST00000119350 Neurod2Q62414 383 aa7.44□□□□□ -1.22
Hmgb1-ps1-201ENSMUST00000119350 Zbtb12Q9Z150 459 aa7.44□□□□□ -1.22
Hmgb1-ps1-201ENSMUST00000119350 Smarca2Q6DIC0 1577 aa7.44□□□□□ -1.22
Hmgb1-ps1-201ENSMUST00000119350 Stk3Q9JI10 497 aa7.43□□□□□ -1.22
Hmgb1-ps1-201ENSMUST00000119350 Bcl2l13P59017 434 aa7.42□□□□□ -1.22
Hmgb1-ps1-201ENSMUST00000119350 Apba2P98084 750 aa7.42□□□□□ -1.22
Hmgb1-ps1-201ENSMUST00000119350 Lrrc43Q3V0L5 667 aa7.4□□□□□ -1.22
Hmgb1-ps1-201ENSMUST00000119350 GapdhsQ64467 440 aa7.4□□□□□ -1.22
Hmgb1-ps1-201ENSMUST00000119350 Secisbp2lQ6A098 1086 aaKnown RBP7.4□□□□□ -1.22
Hmgb1-ps1-201ENSMUST00000119350 Mrc2Q64449 1479 aa7.39□□□□□ -1.23
Hmgb1-ps1-201ENSMUST00000119350 Fam117bQ3U3E2 584 aa7.39□□□□□ -1.23
Hmgb1-ps1-201ENSMUST00000119350 Nap1l5Q9JJF0 156 aa7.39□□□□□ -1.23
Hmgb1-ps1-201ENSMUST00000119350 TraipQ8VIG6 470 aa7.38□□□□□ -1.23
Hmgb1-ps1-201ENSMUST00000119350 Stk24Q99KH8 431 aa7.38□□□□□ -1.23
Hmgb1-ps1-201ENSMUST00000119350 Frmpd1A2AKB4 1549 aa7.36□□□□□ -1.23
Hmgb1-ps1-201ENSMUST00000119350 Znf330Q922H9 316 aa7.35□□□□□ -1.23
Hmgb1-ps1-201ENSMUST00000119350 Znf704Q9ERQ3 566 aa7.35□□□□□ -1.23
Hmgb1-ps1-201ENSMUST00000119350 Wdr62Q3U3T8 1523 aa7.35□□□□□ -1.23
Hmgb1-ps1-201ENSMUST00000119350 Smarca4Q3TKT4 1613 aaKnown RBP7.34□□□□□ -1.23
Hmgb1-ps1-201ENSMUST00000119350 Iqgap2Q3UQ44 1575 aa7.34□□□□□ -1.23
Hmgb1-ps1-201ENSMUST00000119350 Baz1aO88379 1555 aa7.33□□□□□ -1.24
Hmgb1-ps1-201ENSMUST00000119350 Slc4a5E9Q3M5 1116 aa7.33□□□□□ -1.24
Hmgb1-ps1-201ENSMUST00000119350 Mier1Q5UAK0 511 aa7.33□□□□□ -1.24
Hmgb1-ps1-201ENSMUST00000119350 Dixdc1Q80Y83 711 aa7.32□□□□□ -1.24
Hmgb1-ps1-201ENSMUST00000119350 Ciz1Q8VEH2 845 aa7.32□□□□□ -1.24
Hmgb1-ps1-201ENSMUST00000119350 Irx6Q9ER75 438 aa7.32□□□□□ -1.24
Hmgb1-ps1-201ENSMUST00000119350 Zcchc6Q5BLK4 1491 aaKnown RBP7.31□□□□□ -1.24
Hmgb1-ps1-201ENSMUST00000119350 Pde4dQ01063 747 aa7.31□□□□□ -1.24
Hmgb1-ps1-201ENSMUST00000119350 Ccdc180J3QNE4 1664 aa7.31□□□□□ -1.24
Hmgb1-ps1-201ENSMUST00000119350 Rtl5Q5DTT4 599 aa7.3□□□□□ -1.24
Hmgb1-ps1-201ENSMUST00000119350 GopcQ8BH60 463 aa7.3□□□□□ -1.24
Hmgb1-ps1-201ENSMUST00000119350 Shroom2A2ALU4 1481 aa7.3□□□□□ -1.24
Hmgb1-ps1-201ENSMUST00000119350 Jarid2Q62315 1234 aa7.29□□□□□ -1.24
Hmgb1-ps1-201ENSMUST00000119350 Repin1Q5U4E2 545 aa7.28□□□□□ -1.24
Hmgb1-ps1-201ENSMUST00000119350 Apbb1Q9QXJ1 710 aa7.28□□□□□ -1.24
Hmgb1-ps1-201ENSMUST00000119350 Rsf1E9PWW9 1441 aaKnown RBP7.27□□□□□ -1.24
Hmgb1-ps1-201ENSMUST00000119350 Pcmtd1P59913 357 aa7.27□□□□□ -1.25
Hmgb1-ps1-201ENSMUST00000119350 E2f4Q8R0K9 410 aa7.27□□□□□ -1.25
Hmgb1-ps1-201ENSMUST00000119350 Chrm1P12657 460 aa7.26□□□□□ -1.25
Hmgb1-ps1-201ENSMUST00000119350 Pabpn1Q8CCS6 302 aaKnown RBP7.26□□□□□ -1.25
Hmgb1-ps1-201ENSMUST00000119350 Col17a1Q07563 1470 aa7.25□□□□□ -1.25
Hmgb1-ps1-201ENSMUST00000119350 Hnrnpul2Q00PI9 745 aaKnown RBP7.25□□□□□ -1.25
Hmgb1-ps1-201ENSMUST00000119350 Kcnv2Q8CFS6 562 aa7.25□□□□□ -1.25
Hmgb1-ps1-201ENSMUST00000119350 Sgip1Q8VD37 806 aa7.25□□□□□ -1.25
Hmgb1-ps1-201ENSMUST00000119350 Gtpbp6Q3U6U5 514 aa7.23□□□□□ -1.25
Hmgb1-ps1-201ENSMUST00000119350 Igsf3Q6ZQA6 1194 aa7.2□□□□□ -1.26
Hmgb1-ps1-201ENSMUST00000119350 Grwd1Q810D6 446 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms