RNA–Protein interactions for RNA: ENSMUST00000112451.7

Sh3kbp1-204, Transcript of SH3 domain-containing kinase-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Sh3kbp1, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1-204ENSMUST00000112451 Samd9lQ69Z37 1561 aa15.28■□□□□ 0.04
Sh3kbp1-204ENSMUST00000112451 Fyco1Q8VDC1 1437 aa15.24■□□□□ 0.03
Sh3kbp1-204ENSMUST00000112451 Pbrm1Q8BSQ9 1634 aaKnown RBP15.23■□□□□ 0.03
Sh3kbp1-204ENSMUST00000112451 Ncapd3Q6ZQK0 1506 aa15.23■□□□□ 0.03
Sh3kbp1-204ENSMUST00000112451 Urb2E9Q7L1 1524 aaKnown RBP15.22■□□□□ 0.03
Sh3kbp1-204ENSMUST00000112451 CntlnA2AM05 1397 aa15.21■□□□□ 0.03
Sh3kbp1-204ENSMUST00000112451 Pcf11G3X9Z4 1553 aa15.21■□□□□ 0.02
Sh3kbp1-204ENSMUST00000112451 TchhA0A0B4J1F9 1599 aa15.2■□□□□ 0.02
Sh3kbp1-204ENSMUST00000112451 EprsQ8CGC7 1512 aaKnown RBP15.2■□□□□ 0.02
Sh3kbp1-204ENSMUST00000112451 Cux1P53564 1515 aa15.18■□□□□ 0.02
Sh3kbp1-204ENSMUST00000112451 Naip1Q9QWK5 1403 aa15.17■□□□□ 0.02
Sh3kbp1-204ENSMUST00000112451 Zeb1Q64318 1117 aa15.15■□□□□ 0.02
Sh3kbp1-204ENSMUST00000112451 UbtfP25976 765 aaKnown RBP15.13■□□□□ 0.01
Sh3kbp1-204ENSMUST00000112451 Ift140E9PY46 1464 aa15.12■□□□□ 0.01
Sh3kbp1-204ENSMUST00000112451 BlmO88700 1416 aa15.12■□□□□ 0.01
Sh3kbp1-204ENSMUST00000112451 Pla2r1Q62028 1487 aa15.12■□□□□ 0.01
Sh3kbp1-204ENSMUST00000112451 Abca5Q8K448 1642 aa15.12■□□□□ 0.01
Sh3kbp1-204ENSMUST00000112451 Magi3Q9EQJ9 1476 aa15.12■□□□□ 0.01
Sh3kbp1-204ENSMUST00000112451 Slx4Q6P1D7 1565 aa15.09■□□□□ 0.01
Sh3kbp1-204ENSMUST00000112451 Adamts12Q811B3 1600 aa15.09■□□□□ 0.01
Sh3kbp1-204ENSMUST00000112451 Grin2aP35436 1464 aa15.07■□□□□ 0
Sh3kbp1-204ENSMUST00000112451 Disp1Q3TDN0 1521 aa15.07■□□□□ 0
Sh3kbp1-204ENSMUST00000112451 Rad54l2Q99NG0 1466 aa15.07■□□□□ 0
Sh3kbp1-204ENSMUST00000112451 Plb1Q3TTY0 1478 aa15.06■□□□□ 0
Sh3kbp1-204ENSMUST00000112451 Plekhg3Q4VAC9 1341 aa15.05■□□□□ -0
Sh3kbp1-204ENSMUST00000112451 Kdm5bQ80Y84 1544 aa15.04■□□□□ -0
Sh3kbp1-204ENSMUST00000112451 Nup160Q9Z0W3 1402 aaKnown RBP15.04■□□□□ -0
Sh3kbp1-204ENSMUST00000112451 Soga1E1U8D0 1418 aa15.01□□□□□ -0.01
Sh3kbp1-204ENSMUST00000112451 CadpsQ80TJ1 1355 aa15□□□□□ -0.01
Sh3kbp1-204ENSMUST00000112451 Gm7298A0A0N4SVU1 1476 aa14.99□□□□□ -0.01
Sh3kbp1-204ENSMUST00000112451 Gm1043A0A140LJC2 1431 aa14.99□□□□□ -0.01
Sh3kbp1-204ENSMUST00000112451 Cc2d2bA0A286YDU8 1405 aa14.98□□□□□ -0.01
Sh3kbp1-204ENSMUST00000112451 Aebp1Q640N1 1128 aa14.98□□□□□ -0.01
Sh3kbp1-204ENSMUST00000112451 Setd1bQ8CFT2 1985 aa14.97□□□□□ -0.01
Sh3kbp1-204ENSMUST00000112451 Lrriq1Q0P5X1 1673 aa14.97□□□□□ -0.01
Sh3kbp1-204ENSMUST00000112451 Pcgf6Q99NA9 353 aa14.97□□□□□ -0.01
Sh3kbp1-204ENSMUST00000112451 Lmtk2Q3TYD6 1471 aa14.97□□□□□ -0.01
Sh3kbp1-204ENSMUST00000112451 Dnajc5bQ9CQ94 199 aa14.96□□□□□ -0.01
Sh3kbp1-204ENSMUST00000112451 WizO88286 1684 aaKnown RBP14.95□□□□□ -0.02
Sh3kbp1-204ENSMUST00000112451 Abca16E9PWJ7 1678 aa14.93□□□□□ -0.02
Sh3kbp1-204ENSMUST00000112451 Mia2Q91ZV0 1396 aa14.93□□□□□ -0.02
Sh3kbp1-204ENSMUST00000112451 Gcc2Q8CHG3 1679 aa14.93□□□□□ -0.02
Sh3kbp1-204ENSMUST00000112451 Fhad1A6PWD2 1420 aa14.9□□□□□ -0.02
Sh3kbp1-204ENSMUST00000112451 Las1lA2BE28 776 aaKnown RBP14.89□□□□□ -0.03
Sh3kbp1-204ENSMUST00000112451 Ccer2J3QPU5 274 aa14.89□□□□□ -0.03
Sh3kbp1-204ENSMUST00000112451 Ap3b1Q9Z1T1 1105 aa14.89□□□□□ -0.03
Sh3kbp1-204ENSMUST00000112451 Vps8Q0P5W1 1427 aa14.87□□□□□ -0.03
Sh3kbp1-204ENSMUST00000112451 Rusc2Q80U22 1514 aa14.85□□□□□ -0.03
Sh3kbp1-204ENSMUST00000112451 Eif4g3Q80XI3 1579 aaKnown RBP14.85□□□□□ -0.03
Sh3kbp1-204ENSMUST00000112451 3425401B19RikD3Z1D3 1412 aa14.85□□□□□ -0.03
Sh3kbp1-204ENSMUST00000112451 Kif27Q7M6Z4 1394 aa14.84□□□□□ -0.03
Sh3kbp1-204ENSMUST00000112451 Fhod3Q76LL6 1578 aa14.84□□□□□ -0.03
Sh3kbp1-204ENSMUST00000112451 Ankrd36D3Z4K0 1415 aa14.83□□□□□ -0.03
Sh3kbp1-204ENSMUST00000112451 PxdnQ3UQ28 1475 aa14.83□□□□□ -0.04
Sh3kbp1-204ENSMUST00000112451 Rapgef6Q5NCJ1 1609 aa14.83□□□□□ -0.04
Sh3kbp1-204ENSMUST00000112451 Naip2Q9QUK4 1447 aa14.82□□□□□ -0.04
Sh3kbp1-204ENSMUST00000112451 TonslQ6NZL6 1363 aa14.82□□□□□ -0.04
Sh3kbp1-204ENSMUST00000112451 Abcc2Q8VI47 1543 aa14.82□□□□□ -0.04
Sh3kbp1-204ENSMUST00000112451 Map3k4O08648 1597 aa14.81□□□□□ -0.04
Sh3kbp1-204ENSMUST00000112451 UacaQ8CGB3 1411 aa14.8□□□□□ -0.04
Sh3kbp1-204ENSMUST00000112451 Rfx7F8VPJ6 1459 aa14.79□□□□□ -0.04
Sh3kbp1-204ENSMUST00000112451 Shroom2A2ALU4 1481 aa14.78□□□□□ -0.04
Sh3kbp1-204ENSMUST00000112451 Supt5hO55201 1082 aaKnown RBP14.78□□□□□ -0.04
Sh3kbp1-204ENSMUST00000112451 Ncoa2Q61026 1462 aa14.76□□□□□ -0.05
Sh3kbp1-204ENSMUST00000112451 NexmifQ5DTT1 1515 aa14.76□□□□□ -0.05
Sh3kbp1-204ENSMUST00000112451 Dhx57Q6P5D3 1388 aaKnown RBP14.76□□□□□ -0.05
Sh3kbp1-204ENSMUST00000112451 BC005561E9Q5E2 1589 aa14.75□□□□□ -0.05
Sh3kbp1-204ENSMUST00000112451 Ccnb3Q810T2 1396 aa14.75□□□□□ -0.05
Sh3kbp1-204ENSMUST00000112451 A2mQ6GQT1 1474 aa14.75□□□□□ -0.05
Sh3kbp1-204ENSMUST00000112451 Arhgef11Q68FM7 1552 aa14.75□□□□□ -0.05
Sh3kbp1-204ENSMUST00000112451 Kiaa1551Q5DTW7 1521 aa14.74□□□□□ -0.05
Sh3kbp1-204ENSMUST00000112451 Mug1P28665 1476 aa14.73□□□□□ -0.05
Sh3kbp1-204ENSMUST00000112451 WrnO09053 1401 aa14.73□□□□□ -0.05
Sh3kbp1-204ENSMUST00000112451 Dnmt1P13864 1620 aaKnown RBP14.73□□□□□ -0.05
Sh3kbp1-204ENSMUST00000112451 Rrbp1Q99PL5 1605 aaKnown RBP14.73□□□□□ -0.05
Sh3kbp1-204ENSMUST00000112451 Cdc42bpaQ3UU96 1719 aa14.72□□□□□ -0.05
Sh3kbp1-204ENSMUST00000112451 Cul7Q8VE73 1689 aa14.7□□□□□ -0.06
Sh3kbp1-204ENSMUST00000112451 Camsap2Q8C1B1 1461 aa14.69□□□□□ -0.06
Sh3kbp1-204ENSMUST00000112451 ClspnQ80YR7 1315 aa14.69□□□□□ -0.06
Sh3kbp1-204ENSMUST00000112451 Lmod2Q3UHZ5 550 aa14.69□□□□□ -0.06
Sh3kbp1-204ENSMUST00000112451 Mapkbp1Q6NS57 1503 aa14.68□□□□□ -0.06
Sh3kbp1-204ENSMUST00000112451 Fam163aQ8CAA5 168 aa14.66□□□□□ -0.06
Sh3kbp1-204ENSMUST00000112451 Ccdc141E9Q8Q6 1531 aa14.65□□□□□ -0.06
Sh3kbp1-204ENSMUST00000112451 Ncoa3O09000 1398 aa14.65□□□□□ -0.06
Sh3kbp1-204ENSMUST00000112451 Setbp1Q9Z180 1582 aa14.64□□□□□ -0.07
Sh3kbp1-204ENSMUST00000112451 Magi1Q6RHR9 1471 aa14.63□□□□□ -0.07
Sh3kbp1-204ENSMUST00000112451 Kiaa1210E9Q0C6 1637 aa14.62□□□□□ -0.07
Sh3kbp1-204ENSMUST00000112451 Mlh3A0A1Y7VMP7 1443 aa14.62□□□□□ -0.07
Sh3kbp1-204ENSMUST00000112451 Caskin1Q6P9K8 1431 aa14.62□□□□□ -0.07
Sh3kbp1-204ENSMUST00000112451 Dennd4bQ3U1Y4 1499 aa14.62□□□□□ -0.07
Sh3kbp1-204ENSMUST00000112451 Il16O54824 1322 aa14.62□□□□□ -0.07
Sh3kbp1-204ENSMUST00000112451 Zcchc11B2RX14 1644 aaKnown RBP14.61□□□□□ -0.07
Sh3kbp1-204ENSMUST00000112451 Fgd6Q69ZL1 1399 aa14.61□□□□□ -0.07
Sh3kbp1-204ENSMUST00000112451 Arhgap27A2AB59 869 aa14.61□□□□□ -0.07
Sh3kbp1-204ENSMUST00000112451 Sall2Q9QX96 1004 aa14.61□□□□□ -0.07
Sh3kbp1-204ENSMUST00000112451 Arhgap31A6X8Z5 1425 aa14.61□□□□□ -0.07
Sh3kbp1-204ENSMUST00000112451 Wdr7Q920I9 1489 aa14.61□□□□□ -0.07
Sh3kbp1-204ENSMUST00000112451 Lamc1P02468 1607 aaKnown RBP14.6□□□□□ -0.07
Sh3kbp1-204ENSMUST00000112451 Plekhh2Q8C115 1491 aa14.6□□□□□ -0.07
Sh3kbp1-204ENSMUST00000112451 Arhgef12Q8R4H2 1543 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms