RNA–Protein interactions for RNA: ENSMUST00000100237.3

Ttf1-201, Transcript of Transcription termination factor 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ttf1, Length 4,160 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttf1-201ENSMUST00000100237 Mier1Q5UAK0 511 aa9.93□□□□□ -0.82
Ttf1-201ENSMUST00000100237 Znf704Q9ERQ3 566 aa9.93□□□□□ -0.82
Ttf1-201ENSMUST00000100237 Rb1cc1Q9ESK9 1588 aa9.93□□□□□ -0.82
Ttf1-201ENSMUST00000100237 Zbtb12Q9Z150 459 aa9.93□□□□□ -0.82
Ttf1-201ENSMUST00000100237 Plekhg3Q4VAC9 1341 aa9.92□□□□□ -0.82
Ttf1-201ENSMUST00000100237 Fgd1P52734 960 aa9.92□□□□□ -0.82
Ttf1-201ENSMUST00000100237 Stra8P70278 393 aa9.9□□□□□ -0.82
Ttf1-201ENSMUST00000100237 Safb2Q80YR5 991 aaKnown RBP9.89□□□□□ -0.83
Ttf1-201ENSMUST00000100237 Cep164Q5DU05 1446 aa9.89□□□□□ -0.83
Ttf1-201ENSMUST00000100237 ScribQ80U72 1612 aa9.87□□□□□ -0.83
Ttf1-201ENSMUST00000100237 Nop58Q6DFW4 536 aaKnown RBP9.87□□□□□ -0.83
Ttf1-201ENSMUST00000100237 Fkbp15Q6P9Q6 1216 aaKnown RBP9.86□□□□□ -0.83
Ttf1-201ENSMUST00000100237 NrdcQ8BHG1 1161 aa9.86□□□□□ -0.83
Ttf1-201ENSMUST00000100237 Ercc6F8VPZ5 1481 aa9.85□□□□□ -0.83
Ttf1-201ENSMUST00000100237 Gtf3c5Q8R2T8 520 aa9.85□□□□□ -0.83
Ttf1-201ENSMUST00000100237 Brd4Q9ESU6 1400 aaKnown RBP9.84□□□□□ -0.83
Ttf1-201ENSMUST00000100237 Nkx1-1G3UXB3 402 aa9.83□□□□□ -0.84
Ttf1-201ENSMUST00000100237 MlecQ6ZQI3 291 aaKnown RBP9.83□□□□□ -0.84
Ttf1-201ENSMUST00000100237 TonslQ6NZL6 1363 aa9.82□□□□□ -0.84
Ttf1-201ENSMUST00000100237 Ppp1r18Q8BQ30 594 aa9.82□□□□□ -0.84
Ttf1-201ENSMUST00000100237 Slc4a5E9Q3M5 1116 aa9.82□□□□□ -0.84
Ttf1-201ENSMUST00000100237 Taok2Q6ZQ29 1240 aa9.82□□□□□ -0.84
Ttf1-201ENSMUST00000100237 Nap1l5Q9JJF0 156 aa9.81□□□□□ -0.84
Ttf1-201ENSMUST00000100237 Ap3b1Q9Z1T1 1105 aa9.79□□□□□ -0.84
Ttf1-201ENSMUST00000100237 Pabpn1Q8CCS6 302 aaKnown RBP9.79□□□□□ -0.84
Ttf1-201ENSMUST00000100237 Fbln2P37889 1221 aa9.78□□□□□ -0.84
Ttf1-201ENSMUST00000100237 NacadQ5SWP3 1504 aa9.78□□□□□ -0.84
Ttf1-201ENSMUST00000100237 Rnf216P58283 853 aa9.78□□□□□ -0.84
Ttf1-201ENSMUST00000100237 C1qtnf12Q8R2Z0 308 aa9.77□□□□□ -0.85
Ttf1-201ENSMUST00000100237 Fam50aQ9WV03 339 aaKnown RBP9.77□□□□□ -0.85
Ttf1-201ENSMUST00000100237 Baz1aO88379 1555 aa9.75□□□□□ -0.85
Ttf1-201ENSMUST00000100237 Ms4a5Q810P8 197 aa9.75□□□□□ -0.85
Ttf1-201ENSMUST00000100237 Plcd4Q8K3R3 807 aa9.75□□□□□ -0.85
Ttf1-201ENSMUST00000100237 Tnnt3Q9QZ47 272 aa9.75□□□□□ -0.85
Ttf1-201ENSMUST00000100237 NclP09405 707 aaKnown RBP9.74□□□□□ -0.85
Ttf1-201ENSMUST00000100237 Sall2Q9QX96 1004 aa9.74□□□□□ -0.85
Ttf1-201ENSMUST00000100237 Pds5bQ4VA53 1446 aaKnown RBP9.73□□□□□ -0.85
Ttf1-201ENSMUST00000100237 Tcf3P15806 651 aa9.73□□□□□ -0.85
Ttf1-201ENSMUST00000100237 Gtpbp6Q3U6U5 514 aa9.73□□□□□ -0.85
Ttf1-201ENSMUST00000100237 ClspnQ80YR7 1315 aa9.72□□□□□ -0.85
Ttf1-201ENSMUST00000100237 Zfp777B9EKF4 885 aa9.72□□□□□ -0.85
Ttf1-201ENSMUST00000100237 Eif5bQ05D44 1216 aaKnown RBP9.71□□□□□ -0.86
Ttf1-201ENSMUST00000100237 MycnP03966 462 aaKnown RBP9.7□□□□□ -0.86
Ttf1-201ENSMUST00000100237 Prr29B1ARI9 187 aa9.68□□□□□ -0.86
Ttf1-201ENSMUST00000100237 BccipQ9CWI3 316 aa9.68□□□□□ -0.86
Ttf1-201ENSMUST00000100237 Cyb5rlB1AS42 316 aa9.67□□□□□ -0.86
Ttf1-201ENSMUST00000100237 Gtf3c3Q3TMP1 882 aa9.64□□□□□ -0.87
Ttf1-201ENSMUST00000100237 Spock2Q9ER58 423 aa9.64□□□□□ -0.87
Ttf1-201ENSMUST00000100237 Kdm5dQ62240 1548 aa9.63□□□□□ -0.87
Ttf1-201ENSMUST00000100237 Clip1Q922J3 1391 aa9.63□□□□□ -0.87
Ttf1-201ENSMUST00000100237 TimelessQ9R1X4 1197 aa9.62□□□□□ -0.87
Ttf1-201ENSMUST00000100237 Gm13695A2AK44 830 aa9.61□□□□□ -0.87
Ttf1-201ENSMUST00000100237 SafbD3YXK2 937 aaKnown RBP9.61□□□□□ -0.87
Ttf1-201ENSMUST00000100237 Golga3P55937 1487 aa9.59□□□□□ -0.87
Ttf1-201ENSMUST00000100237 Lmod2Q3UHZ5 550 aa9.58□□□□□ -0.88
Ttf1-201ENSMUST00000100237 Aebp2Q9Z248 504 aaKnown RBP9.56□□□□□ -0.88
Ttf1-201ENSMUST00000100237 Kcnn1Q9EQR3 537 aa9.56□□□□□ -0.88
Ttf1-201ENSMUST00000100237 4933416C03RikQ3V063 378 aa9.55□□□□□ -0.88
Ttf1-201ENSMUST00000100237 Eid3Q3V124 375 aa9.55□□□□□ -0.88
Ttf1-201ENSMUST00000100237 Scaf1Q5U4C3 1256 aaKnown RBP9.55□□□□□ -0.88
Ttf1-201ENSMUST00000100237 Spryd3E9Q9B3 442 aa9.54□□□□□ -0.88
Ttf1-201ENSMUST00000100237 Rsf1E9PWW9 1441 aaKnown RBP9.53□□□□□ -0.88
Ttf1-201ENSMUST00000100237 Anp32bQ9EST5 272 aaKnown RBP9.53□□□□□ -0.88
Ttf1-201ENSMUST00000100237 Sycp2Q9CUU3 1500 aa9.53□□□□□ -0.88
Ttf1-201ENSMUST00000100237 Kif15Q6P9L6 1387 aa9.51□□□□□ -0.89
Ttf1-201ENSMUST00000100237 Znf316Q6PGE4 1016 aa9.5□□□□□ -0.89
Ttf1-201ENSMUST00000100237 Stk3Q9JI10 497 aa9.5□□□□□ -0.89
Ttf1-201ENSMUST00000100237 Dnajc5P60904 198 aa9.5□□□□□ -0.89
Ttf1-201ENSMUST00000100237 Ubap1lG3UW59 384 aa9.49□□□□□ -0.89
Ttf1-201ENSMUST00000100237 Hnrnpul2Q00PI9 745 aaKnown RBP9.49□□□□□ -0.89
Ttf1-201ENSMUST00000100237 Zbtb7cQ8VCZ7 619 aa9.48□□□□□ -0.89
Ttf1-201ENSMUST00000100237 Rtl5Q5DTT4 599 aa9.48□□□□□ -0.89
Ttf1-201ENSMUST00000100237 Phldb1Q6PDH0 1371 aaKnown RBP9.48□□□□□ -0.89
Ttf1-201ENSMUST00000100237 Irx3P81067 507 aa9.48□□□□□ -0.89
Ttf1-201ENSMUST00000100237 Arid3cA6PWV5 409 aa9.47□□□□□ -0.89
Ttf1-201ENSMUST00000100237 Ccer2J3QPU5 274 aa9.47□□□□□ -0.89
Ttf1-201ENSMUST00000100237 Rsph6aQ8CDR2 708 aa9.46□□□□□ -0.89
Ttf1-201ENSMUST00000100237 Crybg2B7ZCC2 1516 aa9.46□□□□□ -0.89
Ttf1-201ENSMUST00000100237 Npm3Q9CPP0 175 aaKnown RBP9.46□□□□□ -0.89
Ttf1-201ENSMUST00000100237 ArxO35085 564 aa9.45□□□□□ -0.9
Ttf1-201ENSMUST00000100237 Tulp1Q9Z273 543 aa9.45□□□□□ -0.9
Ttf1-201ENSMUST00000100237 Erich4Q3UNU4 136 aa9.44□□□□□ -0.9
Ttf1-201ENSMUST00000100237 NeflP08551 543 aa9.43□□□□□ -0.9
Ttf1-201ENSMUST00000100237 Ripply1Q2WG77 201 aa9.43□□□□□ -0.9
Ttf1-201ENSMUST00000100237 Ggt6Q6PDE7 497 aa9.43□□□□□ -0.9
Ttf1-201ENSMUST00000100237 AampJ3QN89 436 aa9.42□□□□□ -0.9
Ttf1-201ENSMUST00000100237 Anp32aO35381 247 aa9.42□□□□□ -0.9
Ttf1-201ENSMUST00000100237 Upf2A2AT37 1269 aaKnown RBP9.42□□□□□ -0.9
Ttf1-201ENSMUST00000100237 Ipo4Q8VI75 1082 aa9.42□□□□□ -0.9
Ttf1-201ENSMUST00000100237 P3h3Q8CG70 732 aa9.41□□□□□ -0.9
Ttf1-201ENSMUST00000100237 Ccdc88bQ4QRL3 1481 aa9.4□□□□□ -0.9
Ttf1-201ENSMUST00000100237 Atp1b4Q99ME6 356 aa9.4□□□□□ -0.9
Ttf1-201ENSMUST00000100237 BlmO88700 1416 aa9.4□□□□□ -0.9
Ttf1-201ENSMUST00000100237 Setd5Q5XJV7 1441 aa9.4□□□□□ -0.9
Ttf1-201ENSMUST00000100237 AknaQ80VW7 1404 aa9.39□□□□□ -0.91
Ttf1-201ENSMUST00000100237 Arhgap27A2AB59 869 aa9.39□□□□□ -0.91
Ttf1-201ENSMUST00000100237 Os9Q8K2C7 672 aa9.39□□□□□ -0.91
Ttf1-201ENSMUST00000100237 Vgll3P85442 326 aa9.38□□□□□ -0.91
Ttf1-201ENSMUST00000100237 Rbm10Q99KG3 930 aaKnown RBP9.38□□□□□ -0.91
Ttf1-201ENSMUST00000100237 Stk25Q9Z2W1 426 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 78.7 ms