RNA–Protein interactions for RNA: ENSMUST00000100069.8

Scn3a-202, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 8,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-202ENSMUST00000100069 Safb2Q80YR5 991 aaKnown RBP9□□□□□ -0.97
Scn3a-202ENSMUST00000100069 Prdm10Q3UTQ7 1184 aa8.99□□□□□ -0.97
Scn3a-202ENSMUST00000100069 Gm38655A0A286YDK6 273 aa8.99□□□□□ -0.97
Scn3a-202ENSMUST00000100069 Hsp90ab1P11499 724 aaKnown RBP8.99□□□□□ -0.97
Scn3a-202ENSMUST00000100069 BlmO88700 1416 aa8.98□□□□□ -0.97
Scn3a-202ENSMUST00000100069 IqubQ8CDK3 788 aa8.98□□□□□ -0.97
Scn3a-202ENSMUST00000100069 Map7O88735 730 aa8.97□□□□□ -0.97
Scn3a-202ENSMUST00000100069 PtmaP26350 111 aa8.96□□□□□ -0.97
Scn3a-202ENSMUST00000100069 Cwc22Q8C5N3 908 aaKnown RBP8.96□□□□□ -0.97
Scn3a-202ENSMUST00000100069 Sall2Q9QX96 1004 aa8.96□□□□□ -0.98
Scn3a-202ENSMUST00000100069 Mrs2Q5NCE8 434 aa8.95□□□□□ -0.98
Scn3a-202ENSMUST00000100069 PnnO35691 725 aaKnown RBP8.95□□□□□ -0.98
Scn3a-202ENSMUST00000100069 Eid3Q3V124 375 aa8.95□□□□□ -0.98
Scn3a-202ENSMUST00000100069 Mbd3Q9Z2D8 285 aaKnown RBP8.94□□□□□ -0.98
Scn3a-202ENSMUST00000100069 Ppm1gQ61074 542 aa8.94□□□□□ -0.98
Scn3a-202ENSMUST00000100069 Q8BT18 775 aa8.94□□□□□ -0.98
Scn3a-202ENSMUST00000100069 Iqcf3Q9D498 203 aa8.93□□□□□ -0.98
Scn3a-202ENSMUST00000100069 PtmsQ9D0J8 101 aaKnown RBP8.93□□□□□ -0.98
Scn3a-202ENSMUST00000100069 Ccdc18Q640L5 1455 aa8.93□□□□□ -0.98
Scn3a-202ENSMUST00000100069 Rad21Q61550 635 aaKnown RBP8.93□□□□□ -0.98
Scn3a-202ENSMUST00000100069 Ubl4bQ9CQ84 188 aa8.93□□□□□ -0.98
Scn3a-202ENSMUST00000100069 CanxP35564 591 aaKnown RBP8.93□□□□□ -0.98
Scn3a-202ENSMUST00000100069 Lmod3E9QA62 571 aa8.93□□□□□ -0.98
Scn3a-202ENSMUST00000100069 Trim30dE9PWL0 497 aa8.92□□□□□ -0.98
Scn3a-202ENSMUST00000100069 Fkbp15Q6P9Q6 1216 aaKnown RBP8.92□□□□□ -0.98
Scn3a-202ENSMUST00000100069 NudcO35685 332 aaKnown RBP8.9□□□□□ -0.98
Scn3a-202ENSMUST00000100069 Setd5Q5XJV7 1441 aa8.9□□□□□ -0.98
Scn3a-202ENSMUST00000100069 Gm973E9Q295 1059 aa8.9□□□□□ -0.98
Scn3a-202ENSMUST00000100069 Mapk8ip3Q9ESN9 1337 aa8.9□□□□□ -0.99
Scn3a-202ENSMUST00000100069 Ccdc27Q3V036 639 aa8.89□□□□□ -0.99
Scn3a-202ENSMUST00000100069 Eif4g2Q62448 906 aaKnown RBP8.89□□□□□ -0.99
Scn3a-202ENSMUST00000100069 Ercc6F8VPZ5 1481 aa8.89□□□□□ -0.99
Scn3a-202ENSMUST00000100069 Mia2Q91ZV0 1396 aa8.89□□□□□ -0.99
Scn3a-202ENSMUST00000100069 Rangap1P46061 589 aaKnown RBP8.89□□□□□ -0.99
Scn3a-202ENSMUST00000100069 Pde3bQ61409 1100 aa8.89□□□□□ -0.99
Scn3a-202ENSMUST00000100069 Arid4bA2CG63 1314 aaKnown RBP8.89□□□□□ -0.99
Scn3a-202ENSMUST00000100069 Calcoco2A2A6M5 331 aa8.89□□□□□ -0.99
Scn3a-202ENSMUST00000100069 Rsf1E9PWW9 1441 aaKnown RBP8.88□□□□□ -0.99
Scn3a-202ENSMUST00000100069 MccE9PWI3 1003 aa8.88□□□□□ -0.99
Scn3a-202ENSMUST00000100069 Eea1Q8BL66 1411 aa8.87□□□□□ -0.99
Scn3a-202ENSMUST00000100069 Mapk8ip2Q9ERE9 830 aa8.87□□□□□ -0.99
Scn3a-202ENSMUST00000100069 Casc1Q6TDU8 730 aa8.87□□□□□ -0.99
Scn3a-202ENSMUST00000100069 NacadQ5SWP3 1504 aa8.87□□□□□ -0.99
Scn3a-202ENSMUST00000100069 Srpk2O54781 681 aaKnown RBP8.87□□□□□ -0.99
Scn3a-202ENSMUST00000100069 BccipQ9CWI3 316 aa8.87□□□□□ -0.99
Scn3a-202ENSMUST00000100069 KnstrnQ9D9Z1 312 aaKnown RBP8.86□□□□□ -0.99
Scn3a-202ENSMUST00000100069 Ofd1Q80Z25 1017 aa8.86□□□□□ -0.99
Scn3a-202ENSMUST00000100069 Exosc9Q9JHI7 438 aaKnown RBP8.86□□□□□ -0.99
Scn3a-202ENSMUST00000100069 Chic2Q9D9G3 165 aa8.85□□□□□ -0.99
Scn3a-202ENSMUST00000100069 P3h3Q8CG70 732 aa8.85□□□□□ -0.99
Scn3a-202ENSMUST00000100069 Baz1aO88379 1555 aa8.84□□□□□ -0.99
Scn3a-202ENSMUST00000100069 1700123L14RikQ3V2K7 440 aa8.84□□□□□ -0.99
Scn3a-202ENSMUST00000100069 Gm6268A2A3U9 297 aa8.84□□□□□ -0.99
Scn3a-202ENSMUST00000100069 HnrnpuQ8VEK3 800 aaKnown RBP8.84□□□□□ -1
Scn3a-202ENSMUST00000100069 Pes1Q9EQ61 584 aaKnown RBP8.83□□□□□ -1
Scn3a-202ENSMUST00000100069 Plcb2A3KGF7 1181 aa8.83□□□□□ -1
Scn3a-202ENSMUST00000100069 Mtus2Q3UHD3 1353 aa8.83□□□□□ -1
Scn3a-202ENSMUST00000100069 Wwc2Q6NXJ0 1187 aa8.83□□□□□ -1
Scn3a-202ENSMUST00000100069 Dnai2A2AC93 623 aa8.83□□□□□ -1
Scn3a-202ENSMUST00000100069 Pknox2Q8BG99 474 aa8.82□□□□□ -1
Scn3a-202ENSMUST00000100069 Vsig10D3YX43 558 aa8.82□□□□□ -1
Scn3a-202ENSMUST00000100069 Rgl3Q3UYI5 709 aa8.81□□□□□ -1
Scn3a-202ENSMUST00000100069 Golga3P55937 1487 aa8.81□□□□□ -1
Scn3a-202ENSMUST00000100069 Card11Q8CIS0 1159 aa8.81□□□□□ -1
Scn3a-202ENSMUST00000100069 Mroh3A0A1D5RM54 893 aa8.8□□□□□ -1
Scn3a-202ENSMUST00000100069 Tnnt2P50752 301 aa8.8□□□□□ -1
Scn3a-202ENSMUST00000100069 Fhad1A6PWD2 1420 aa8.79□□□□□ -1
Scn3a-202ENSMUST00000100069 Plppr3Q7TPB0 716 aa8.79□□□□□ -1
Scn3a-202ENSMUST00000100069 Znf316Q6PGE4 1016 aa8.79□□□□□ -1
Scn3a-202ENSMUST00000100069 Trim26Q99PN3 545 aa8.79□□□□□ -1
Scn3a-202ENSMUST00000100069 Fam71e1A1L3C1 212 aa8.78□□□□□ -1
Scn3a-202ENSMUST00000100069 Gm20521D3Z5F7 333 aa8.78□□□□□ -1
Scn3a-202ENSMUST00000100069 Podxl2Q8CAE9 603 aa8.76□□□□□ -1.01
Scn3a-202ENSMUST00000100069 Tpm3-rs7D3Z2H9 248 aa8.76□□□□□ -1.01
Scn3a-202ENSMUST00000100069 Kif15Q6P9L6 1387 aa8.76□□□□□ -1.01
Scn3a-202ENSMUST00000100069 Sart3Q9JLI8 962 aaKnown RBP8.75□□□□□ -1.01
Scn3a-202ENSMUST00000100069 SetQ9EQU5 289 aaKnown RBP8.75□□□□□ -1.01
Scn3a-202ENSMUST00000100069 AU015836B2RUM3 263 aa8.75□□□□□ -1.01
Scn3a-202ENSMUST00000100069 Mak16Q8BGS0 296 aaKnown RBP8.75□□□□□ -1.01
Scn3a-202ENSMUST00000100069 Cald1E9QA15 768 aaKnown RBP8.74□□□□□ -1.01
Scn3a-202ENSMUST00000100069 Stag3O70576 1240 aa8.74□□□□□ -1.01
Scn3a-202ENSMUST00000100069 4933402E13RikQ9D4D2 429 aa8.74□□□□□ -1.01
Scn3a-202ENSMUST00000100069 Hsp90b1P08113 802 aaKnown RBP8.74□□□□□ -1.01
Scn3a-202ENSMUST00000100069 Rwdd1Q9CQK7 243 aa8.73□□□□□ -1.01
Scn3a-202ENSMUST00000100069 Smarce1O54941 411 aaKnown RBP8.73□□□□□ -1.01
Scn3a-202ENSMUST00000100069 R3hcc1Q8BSI6 488 aa8.73□□□□□ -1.01
Scn3a-202ENSMUST00000100069 Sh3bp5Q9Z131 463 aa8.73□□□□□ -1.01
Scn3a-202ENSMUST00000100069 Kdm2aP59997 1161 aa8.72□□□□□ -1.01
Scn3a-202ENSMUST00000100069 Irx3P81067 507 aa8.72□□□□□ -1.01
Scn3a-202ENSMUST00000100069 MsnP26041 577 aaKnown RBP8.71□□□□□ -1.01
Scn3a-202ENSMUST00000100069 RdxP26043 583 aaKnown RBP8.71□□□□□ -1.02
Scn3a-202ENSMUST00000100069 Rsph4aQ8BYM7 716 aa8.7□□□□□ -1.02
Scn3a-202ENSMUST00000100069 Rtf1A2AQ19 715 aaKnown RBP8.7□□□□□ -1.02
Scn3a-202ENSMUST00000100069 Tcerg1Q8CGF7 1100 aaKnown RBP8.68□□□□□ -1.02
Scn3a-202ENSMUST00000100069 Nol10Q5RJG1 687 aaKnown RBP8.68□□□□□ -1.02
Scn3a-202ENSMUST00000100069 Tmf1B9EKI3 1091 aa8.68□□□□□ -1.02
Scn3a-202ENSMUST00000100069 Anapc15P60007 132 aa8.68□□□□□ -1.02
Scn3a-202ENSMUST00000100069 Irx6Q9ER75 438 aa8.68□□□□□ -1.02
Scn3a-202ENSMUST00000100069 Atp6v1dP57746 247 aa8.67□□□□□ -1.02
Scn3a-202ENSMUST00000100069 HdgfP51859 237 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms