RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 AknaQ80VW7 1404 aa15.81■□□□□ 0.12
Scn8a-202ENSMUST00000096198 Fgd6Q69ZL1 1399 aa15.8■□□□□ 0.12
Scn8a-202ENSMUST00000096198 Ifnlr1Q8CGK5 535 aa15.77■□□□□ 0.12
Scn8a-202ENSMUST00000096198 Chd1P40201 1711 aa15.77■□□□□ 0.11
Scn8a-202ENSMUST00000096198 Arhgef11Q68FM7 1552 aa15.75■□□□□ 0.11
Scn8a-202ENSMUST00000096198 Nup160Q9Z0W3 1402 aaKnown RBP15.74■□□□□ 0.11
Scn8a-202ENSMUST00000096198 AdgbG3UZ78 1657 aa15.73■□□□□ 0.11
Scn8a-202ENSMUST00000096198 Cc2d2bA0A286YDU8 1405 aa15.7■□□□□ 0.1
Scn8a-202ENSMUST00000096198 Mapkbp1Q6NS57 1503 aa15.67■□□□□ 0.1
Scn8a-202ENSMUST00000096198 PogzQ8BZH4 1409 aaKnown RBP15.67■□□□□ 0.1
Scn8a-202ENSMUST00000096198 Golga3P55937 1487 aa15.65■□□□□ 0.1
Scn8a-202ENSMUST00000096198 Ccdc18Q640L5 1455 aa15.65■□□□□ 0.1
Scn8a-202ENSMUST00000096198 Ttc37F8VPK0 1563 aa15.64■□□□□ 0.09
Scn8a-202ENSMUST00000096198 Brd4Q9ESU6 1400 aaKnown RBP15.63■□□□□ 0.09
Scn8a-202ENSMUST00000096198 Duox2A2AQ99 1517 aa15.61■□□□□ 0.09
Scn8a-202ENSMUST00000096198 EprsQ8CGC7 1512 aaKnown RBP15.61■□□□□ 0.09
Scn8a-202ENSMUST00000096198 AqrQ8CFQ3 1481 aaKnown RBP15.59■□□□□ 0.09
Scn8a-202ENSMUST00000096198 Depdc5P61460 1591 aa15.59■□□□□ 0.09
Scn8a-202ENSMUST00000096198 Fndc1E9Q043 1732 aa15.59■□□□□ 0.09
Scn8a-202ENSMUST00000096198 Samd9lQ69Z37 1561 aa15.57■□□□□ 0.08
Scn8a-202ENSMUST00000096198 Pbrm1Q8BSQ9 1634 aaKnown RBP15.57■□□□□ 0.08
Scn8a-202ENSMUST00000096198 Clasp1Q80TV8 1535 aaKnown RBP15.55■□□□□ 0.08
Scn8a-202ENSMUST00000096198 Soga1E1U8D0 1418 aa15.55■□□□□ 0.08
Scn8a-202ENSMUST00000096198 AI481877A2ALV5 1481 aa15.54■□□□□ 0.08
Scn8a-202ENSMUST00000096198 Rad54l2Q99NG0 1466 aa15.52■□□□□ 0.08
Scn8a-202ENSMUST00000096198 CadpsQ80TJ1 1355 aa15.51■□□□□ 0.07
Scn8a-202ENSMUST00000096198 Kdm6bQ5NCY0 1641 aa15.48■□□□□ 0.07
Scn8a-202ENSMUST00000096198 Arid3cA6PWV5 409 aa15.48■□□□□ 0.07
Scn8a-202ENSMUST00000096198 Grin2aP35436 1464 aa15.46■□□□□ 0.06
Scn8a-202ENSMUST00000096198 Neo1P97798 1493 aa15.44■□□□□ 0.06
Scn8a-202ENSMUST00000096198 Magi3Q9EQJ9 1476 aa15.43■□□□□ 0.06
Scn8a-202ENSMUST00000096198 TnnQ80Z71 1560 aa15.41■□□□□ 0.06
Scn8a-202ENSMUST00000096198 Ccdc136Q3TVA9 1136 aa15.4■□□□□ 0.06
Scn8a-202ENSMUST00000096198 BC005561E9Q5E2 1589 aa15.4■□□□□ 0.06
Scn8a-202ENSMUST00000096198 Dnmt1P13864 1620 aaKnown RBP15.39■□□□□ 0.05
Scn8a-202ENSMUST00000096198 Kif7B7ZNG0 1348 aa15.39■□□□□ 0.05
Scn8a-202ENSMUST00000096198 Gab3Q8BSM5 595 aa15.38■□□□□ 0.05
Scn8a-202ENSMUST00000096198 Zfyve16Q80U44 1528 aa15.36■□□□□ 0.05
Scn8a-202ENSMUST00000096198 Gm14025A2AP89 1413 aa15.34■□□□□ 0.05
Scn8a-202ENSMUST00000096198 PtprmP28828 1452 aa15.31■□□□□ 0.04
Scn8a-202ENSMUST00000096198 NrkQ9R0G8 1455 aa15.28■□□□□ 0.04
Scn8a-202ENSMUST00000096198 Arhgef12Q8R4H2 1543 aaKnown RBP15.27■□□□□ 0.04
Scn8a-202ENSMUST00000096198 Arhgap27A2AB59 869 aa15.27■□□□□ 0.04
Scn8a-202ENSMUST00000096198 Znf608Q56A10 1511 aa15.27■□□□□ 0.03
Scn8a-202ENSMUST00000096198 Fkbp15Q6P9Q6 1216 aaKnown RBP15.26■□□□□ 0.03
Scn8a-202ENSMUST00000096198 Abcc2Q8VI47 1543 aa15.23■□□□□ 0.03
Scn8a-202ENSMUST00000096198 Grin2bQ01097 1482 aa15.23■□□□□ 0.03
Scn8a-202ENSMUST00000096198 Rnf17Q99MV7 1640 aa15.21■□□□□ 0.02
Scn8a-202ENSMUST00000096198 Pla2r1Q62028 1487 aa15.2■□□□□ 0.02
Scn8a-202ENSMUST00000096198 Lrrc9Q8CDN9 1456 aa15.2■□□□□ 0.02
Scn8a-202ENSMUST00000096198 Naip2Q9QUK4 1447 aa15.19■□□□□ 0.02
Scn8a-202ENSMUST00000096198 MyclP10166 368 aa15.17■□□□□ 0.02
Scn8a-202ENSMUST00000096198 Map3k4O08648 1597 aa15.16■□□□□ 0.02
Scn8a-202ENSMUST00000096198 Abca16E9PWJ7 1678 aa15.15■□□□□ 0.02
Scn8a-202ENSMUST00000096198 PxdnQ3UQ28 1475 aa15.13■□□□□ 0.01
Scn8a-202ENSMUST00000096198 Ahdc1Q6PAL7 1594 aaKnown RBP15.12■□□□□ 0.01
Scn8a-202ENSMUST00000096198 Scn4aQ9ER60 1841 aa15.1■□□□□ 0.01
Scn8a-202ENSMUST00000096198 SphkapQ6NSW3 1687 aa15.09■□□□□ 0.01
Scn8a-202ENSMUST00000096198 Efcab5A0JP43 1406 aa15.07■□□□□ 0
Scn8a-202ENSMUST00000096198 Neurl4Q5NCX5 1563 aa15.07■□□□□ 0
Scn8a-202ENSMUST00000096198 Eif4g1Q6NZJ6 1600 aaKnown RBP15.06■□□□□ 0
Scn8a-202ENSMUST00000096198 WizO88286 1684 aaKnown RBP15.05■□□□□ -0
Scn8a-202ENSMUST00000096198 Qser1A2BIE1 1698 aa15.04■□□□□ -0
Scn8a-202ENSMUST00000096198 Slc34a2Q9DBP0 697 aa15.04■□□□□ -0
Scn8a-202ENSMUST00000096198 Slx4Q6P1D7 1565 aa15.02■□□□□ -0
Scn8a-202ENSMUST00000096198 Gpatch8A2A6A1 1505 aa15.02■□□□□ -0
Scn8a-202ENSMUST00000096198 Ildr2B5TVM2 661 aa15.02■□□□□ -0
Scn8a-202ENSMUST00000096198 Pip4k2bQ80XI4 416 aa15.02■□□□□ -0
Scn8a-202ENSMUST00000096198 Jph4Q80WT0 628 aa15.01□□□□□ -0.01
Scn8a-202ENSMUST00000096198 AglF8VPN4 1532 aa15□□□□□ -0.01
Scn8a-202ENSMUST00000096198 Hspa1lP16627 641 aa14.99□□□□□ -0.01
Scn8a-202ENSMUST00000096198 TchhA0A0B4J1F9 1599 aa14.97□□□□□ -0.01
Scn8a-202ENSMUST00000096198 Wdr7Q920I9 1489 aa14.95□□□□□ -0.02
Scn8a-202ENSMUST00000096198 Adamtsl3G3UXC7 1706 aa14.92□□□□□ -0.02
Scn8a-202ENSMUST00000096198 Camsap2Q8C1B1 1461 aa14.92□□□□□ -0.02
Scn8a-202ENSMUST00000096198 SynmQ70IV5 1561 aa14.91□□□□□ -0.02
Scn8a-202ENSMUST00000096198 Igf1rQ60751 1373 aa14.9□□□□□ -0.02
Scn8a-202ENSMUST00000096198 Shroom4Q1W617 1475 aa14.89□□□□□ -0.03
Scn8a-202ENSMUST00000096198 Atp10aO54827 1508 aa14.88□□□□□ -0.03
Scn8a-202ENSMUST00000096198 Kif14L0N7N1 1674 aaKnown RBP14.88□□□□□ -0.03
Scn8a-202ENSMUST00000096198 Dip2aQ8BWT5 1523 aa14.87□□□□□ -0.03
Scn8a-202ENSMUST00000096198 Rtl1Q7M732 1744 aa14.86□□□□□ -0.03
Scn8a-202ENSMUST00000096198 Cngb1E1AZ71 1325 aa14.86□□□□□ -0.03
Scn8a-202ENSMUST00000096198 Adamts12Q811B3 1600 aa14.83□□□□□ -0.04
Scn8a-202ENSMUST00000096198 Ncoa1P70365 1447 aa14.82□□□□□ -0.04
Scn8a-202ENSMUST00000096198 Kdm5bQ80Y84 1544 aa14.82□□□□□ -0.04
Scn8a-202ENSMUST00000096198 Ltbp4Q8K4G1 1666 aa14.81□□□□□ -0.04
Scn8a-202ENSMUST00000096198 Safb2Q80YR5 991 aaKnown RBP14.8□□□□□ -0.04
Scn8a-202ENSMUST00000096198 A2mQ6GQT1 1474 aa14.8□□□□□ -0.04
Scn8a-202ENSMUST00000096198 Cul7Q8VE73 1689 aa14.8□□□□□ -0.04
Scn8a-202ENSMUST00000096198 Supt6hQ62383 1726 aaKnown RBP14.78□□□□□ -0.04
Scn8a-202ENSMUST00000096198 Fbln2P37889 1221 aa14.77□□□□□ -0.05
Scn8a-202ENSMUST00000096198 Iqsec2Q5DU25 1478 aa14.76□□□□□ -0.05
Scn8a-202ENSMUST00000096198 Rpap1Q80TE0 1409 aa14.76□□□□□ -0.05
Scn8a-202ENSMUST00000096198 Atp10dQ8K2X1 1416 aa14.76□□□□□ -0.05
Scn8a-202ENSMUST00000096198 Fmn1Q05860 1466 aa14.76□□□□□ -0.05
Scn8a-202ENSMUST00000096198 Abca8bQ8K440 1620 aa14.75□□□□□ -0.05
Scn8a-202ENSMUST00000096198 Abca5Q8K448 1642 aa14.75□□□□□ -0.05
Scn8a-202ENSMUST00000096198 Senp3Q9EP97 568 aaKnown RBP14.74□□□□□ -0.05
Scn8a-202ENSMUST00000096198 NhsB1AV60 1647 aa14.74□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 60.2 ms