RNA–Protein interactions for RNA: ENSMUST00000074002.11

Ube3b-201, Transcript of Ubiquitin-protein ligase E3B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ube3b, Length 5,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3b-201ENSMUST00000074002 Eid3Q3V124 375 aa19.25■□□□□ 0.67
Ube3b-201ENSMUST00000074002 Eif5bQ05D44 1216 aaKnown RBP19.16■□□□□ 0.66
Ube3b-201ENSMUST00000074002 Top2bQ64511 1612 aa19.16■□□□□ 0.66
Ube3b-201ENSMUST00000074002 Top2aQ01320 1528 aaKnown RBP19.14■□□□□ 0.66
Ube3b-201ENSMUST00000074002 Frmpd1A2AKB4 1549 aa19.14■□□□□ 0.65
Ube3b-201ENSMUST00000074002 Fkbp15Q6P9Q6 1216 aaKnown RBP19.13■□□□□ 0.65
Ube3b-201ENSMUST00000074002 Baz1bQ9Z277 1479 aa19.11■□□□□ 0.65
Ube3b-201ENSMUST00000074002 Ccer2J3QPU5 274 aa19.1■□□□□ 0.65
Ube3b-201ENSMUST00000074002 LrpprcQ6PB66 1392 aaKnown RBP19.07■□□□□ 0.64
Ube3b-201ENSMUST00000074002 Chic2Q9D9G3 165 aa19.05■□□□□ 0.64
Ube3b-201ENSMUST00000074002 Aebp2Q9Z248 504 aaKnown RBP19.04■□□□□ 0.64
Ube3b-201ENSMUST00000074002 Wdr62Q3U3T8 1523 aa19.02■□□□□ 0.64
Ube3b-201ENSMUST00000074002 Zbtb7cQ8VCZ7 619 aa19■□□□□ 0.63
Ube3b-201ENSMUST00000074002 Ifnlr1Q8CGK5 535 aa18.99■□□□□ 0.63
Ube3b-201ENSMUST00000074002 Arhgap27A2AB59 869 aa18.98■□□□□ 0.63
Ube3b-201ENSMUST00000074002 Carmil1Q6EDY6 1374 aa18.97■□□□□ 0.63
Ube3b-201ENSMUST00000074002 PrkcshO08795 521 aa18.97■□□□□ 0.63
Ube3b-201ENSMUST00000074002 SafbD3YXK2 937 aaKnown RBP18.96■□□□□ 0.63
Ube3b-201ENSMUST00000074002 Dhx29Q6PGC1 1365 aaKnown RBP18.95■□□□□ 0.62
Ube3b-201ENSMUST00000074002 Shroom4Q1W617 1475 aa18.94■□□□□ 0.62
Ube3b-201ENSMUST00000074002 Aebp1Q640N1 1128 aa18.93■□□□□ 0.62
Ube3b-201ENSMUST00000074002 DaxxO35613 739 aa18.9■□□□□ 0.62
Ube3b-201ENSMUST00000074002 Hnrnpul2Q00PI9 745 aaKnown RBP18.88■□□□□ 0.61
Ube3b-201ENSMUST00000074002 CntlnA2AM05 1397 aa18.88■□□□□ 0.61
Ube3b-201ENSMUST00000074002 NrkQ9R0G8 1455 aa18.87■□□□□ 0.61
Ube3b-201ENSMUST00000074002 Efcab5A0JP43 1406 aa18.86■□□□□ 0.61
Ube3b-201ENSMUST00000074002 Arhgap35Q91YM2 1499 aa18.85■□□□□ 0.61
Ube3b-201ENSMUST00000074002 Kif27Q7M6Z4 1394 aa18.85■□□□□ 0.61
Ube3b-201ENSMUST00000074002 Rpap1Q80TE0 1409 aa18.83■□□□□ 0.6
Ube3b-201ENSMUST00000074002 Grin2bQ01097 1482 aa18.82■□□□□ 0.6
Ube3b-201ENSMUST00000074002 Calr4Q3TQS0 420 aa18.82■□□□□ 0.6
Ube3b-201ENSMUST00000074002 NrdcQ8BHG1 1161 aa18.82■□□□□ 0.6
Ube3b-201ENSMUST00000074002 Lamc3Q9R0B6 1581 aa18.81■□□□□ 0.6
Ube3b-201ENSMUST00000074002 Os9Q8K2C7 672 aa18.81■□□□□ 0.6
Ube3b-201ENSMUST00000074002 PtprkP35822 1457 aa18.8■□□□□ 0.6
Ube3b-201ENSMUST00000074002 Fyco1Q8VDC1 1437 aa18.79■□□□□ 0.6
Ube3b-201ENSMUST00000074002 Ppp4r2Q0VGB7 417 aa18.79■□□□□ 0.6
Ube3b-201ENSMUST00000074002 Mia2Q91ZV0 1396 aa18.79■□□□□ 0.6
Ube3b-201ENSMUST00000074002 Camsap1A2AHC3 1581 aa18.77■□□□□ 0.6
Ube3b-201ENSMUST00000074002 Duox2A2AQ99 1517 aa18.76■□□□□ 0.59
Ube3b-201ENSMUST00000074002 Anp32bQ9EST5 272 aaKnown RBP18.75■□□□□ 0.59
Ube3b-201ENSMUST00000074002 PogzQ8BZH4 1409 aaKnown RBP18.73■□□□□ 0.59
Ube3b-201ENSMUST00000074002 Map3k1P53349 1493 aa18.72■□□□□ 0.59
Ube3b-201ENSMUST00000074002 Mroh2bQ7M6Y6 1581 aa18.68■□□□□ 0.58
Ube3b-201ENSMUST00000074002 Mtus2Q3UHD3 1353 aa18.67■□□□□ 0.58
Ube3b-201ENSMUST00000074002 Rad54l2Q99NG0 1466 aa18.66■□□□□ 0.58
Ube3b-201ENSMUST00000074002 Mrc2Q64449 1479 aa18.66■□□□□ 0.58
Ube3b-201ENSMUST00000074002 Erich6D3Z6S9 713 aa18.66■□□□□ 0.58
Ube3b-201ENSMUST00000074002 Clstn2Q9ER65 966 aa18.64■□□□□ 0.58
Ube3b-201ENSMUST00000074002 Arap1Q4LDD4 1452 aa18.62■□□□□ 0.57
Ube3b-201ENSMUST00000074002 Wdr43Q6ZQL4 677 aaKnown RBP18.61■□□□□ 0.57
Ube3b-201ENSMUST00000074002 Hdac5Q9Z2V6 1113 aa18.6■□□□□ 0.57
Ube3b-201ENSMUST00000074002 NeflP08551 543 aa18.6■□□□□ 0.57
Ube3b-201ENSMUST00000074002 AknaQ80VW7 1404 aa18.59■□□□□ 0.57
Ube3b-201ENSMUST00000074002 Zbtb4Q5F293 982 aa18.59■□□□□ 0.57
Ube3b-201ENSMUST00000074002 4930567H17RikQ3V0K5 233 aa18.58■□□□□ 0.57
Ube3b-201ENSMUST00000074002 Hsp90aa1P07901 733 aaKnown RBP18.57■□□□□ 0.56
Ube3b-201ENSMUST00000074002 Polr1aO35134 1717 aaKnown RBP18.57■□□□□ 0.56
Ube3b-201ENSMUST00000074002 TnnQ80Z71 1560 aa18.56■□□□□ 0.56
Ube3b-201ENSMUST00000074002 Ccnb3Q810T2 1396 aa18.56■□□□□ 0.56
Ube3b-201ENSMUST00000074002 Hspa5P20029 655 aaKnown RBP18.56■□□□□ 0.56
Ube3b-201ENSMUST00000074002 Urb2E9Q7L1 1524 aaKnown RBP18.56■□□□□ 0.56
Ube3b-201ENSMUST00000074002 Naip1Q9QWK5 1403 aa18.55■□□□□ 0.56
Ube3b-201ENSMUST00000074002 Arhgef5E9Q7D5 1581 aa18.53■□□□□ 0.56
Ube3b-201ENSMUST00000074002 WrnO09053 1401 aa18.53■□□□□ 0.56
Ube3b-201ENSMUST00000074002 Cabp1Q9JLK7 227 aa18.53■□□□□ 0.56
Ube3b-201ENSMUST00000074002 Rgl3Q3UYI5 709 aa18.52■□□□□ 0.55
Ube3b-201ENSMUST00000074002 Ccdc9Q8VC31 543 aaKnown RBP18.51■□□□□ 0.55
Ube3b-201ENSMUST00000074002 Rrp7aQ9D1C9 280 aaKnown RBP18.48■□□□□ 0.55
Ube3b-201ENSMUST00000074002 Ccdc27Q3V036 639 aa18.48■□□□□ 0.55
Ube3b-201ENSMUST00000074002 Dhx57Q6P5D3 1388 aaKnown RBP18.48■□□□□ 0.55
Ube3b-201ENSMUST00000074002 AqrQ8CFQ3 1481 aaKnown RBP18.47■□□□□ 0.55
Ube3b-201ENSMUST00000074002 Irx3P81067 507 aa18.45■□□□□ 0.54
Ube3b-201ENSMUST00000074002 Plb1Q3TTY0 1478 aa18.44■□□□□ 0.54
Ube3b-201ENSMUST00000074002 Crocc2F6XLV1 1638 aa18.44■□□□□ 0.54
Ube3b-201ENSMUST00000074002 Cux1P53564 1515 aa18.44■□□□□ 0.54
Ube3b-201ENSMUST00000074002 Tiam1Q60610 1591 aa18.43■□□□□ 0.54
Ube3b-201ENSMUST00000074002 Dnajc5bQ9CQ94 199 aa18.43■□□□□ 0.54
Ube3b-201ENSMUST00000074002 Ncapd3Q6ZQK0 1506 aa18.42■□□□□ 0.54
Ube3b-201ENSMUST00000074002 Mphosph9A6H5Y1 991 aa18.41■□□□□ 0.54
Ube3b-201ENSMUST00000074002 Pkd2O35245 966 aa18.41■□□□□ 0.54
Ube3b-201ENSMUST00000074002 SynmQ70IV5 1561 aa18.41■□□□□ 0.54
Ube3b-201ENSMUST00000074002 Gm7298A0A0N4SVU1 1476 aa18.41■□□□□ 0.54
Ube3b-201ENSMUST00000074002 Plekhh2Q8C115 1491 aa18.41■□□□□ 0.54
Ube3b-201ENSMUST00000074002 EprsQ8CGC7 1512 aaKnown RBP18.41■□□□□ 0.54
Ube3b-201ENSMUST00000074002 Gm13697A2AK42 830 aa18.41■□□□□ 0.54
Ube3b-201ENSMUST00000074002 UacaQ8CGB3 1411 aa18.4■□□□□ 0.54
Ube3b-201ENSMUST00000074002 Fam135aQ6NS59 1506 aa18.4■□□□□ 0.54
Ube3b-201ENSMUST00000074002 CadpsQ80TJ1 1355 aa18.36■□□□□ 0.53
Ube3b-201ENSMUST00000074002 Grwd1Q810D6 446 aaKnown RBP18.36■□□□□ 0.53
Ube3b-201ENSMUST00000074002 Ift140E9PY46 1464 aa18.35■□□□□ 0.53
Ube3b-201ENSMUST00000074002 Map4P27546 1125 aaKnown RBP18.35■□□□□ 0.53
Ube3b-201ENSMUST00000074002 Thoc2B1AZI6 1594 aaKnown RBP18.34■□□□□ 0.53
Ube3b-201ENSMUST00000074002 Supt16hQ920B9 1047 aa18.33■□□□□ 0.53
Ube3b-201ENSMUST00000074002 Atp1b4Q99ME6 356 aa18.33■□□□□ 0.53
Ube3b-201ENSMUST00000074002 Fhad1A6PWD2 1420 aa18.33■□□□□ 0.52
Ube3b-201ENSMUST00000074002 Jph4Q80WT0 628 aa18.32■□□□□ 0.52
Ube3b-201ENSMUST00000074002 Upf2A2AT37 1269 aaKnown RBP18.32■□□□□ 0.52
Ube3b-201ENSMUST00000074002 Pcf11G3X9Z4 1553 aa18.32■□□□□ 0.52
Ube3b-201ENSMUST00000074002 Mrs2Q5NCE8 434 aa18.31■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms