RNA–Protein interactions for RNA: ENSMUST00000069168.12

Cpsf6-201, Transcript of Cleavage and polyadenylation specificity factor subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6-201ENSMUST00000069168 Ppargc1bQ8VHJ7 1014 aa9.64□□□□□ -0.87
Cpsf6-201ENSMUST00000069168 Map3k1P53349 1493 aa9.64□□□□□ -0.87
Cpsf6-201ENSMUST00000069168 Fam135aQ6NS59 1506 aa9.63□□□□□ -0.87
Cpsf6-201ENSMUST00000069168 NrdcQ8BHG1 1161 aa9.63□□□□□ -0.87
Cpsf6-201ENSMUST00000069168 Phldb1Q6PDH0 1371 aaKnown RBP9.62□□□□□ -0.87
Cpsf6-201ENSMUST00000069168 Shroom4Q1W617 1475 aa9.62□□□□□ -0.87
Cpsf6-201ENSMUST00000069168 Ccer2J3QPU5 274 aa9.62□□□□□ -0.87
Cpsf6-201ENSMUST00000069168 Erich3F6QRE9 1637 aa9.62□□□□□ -0.87
Cpsf6-201ENSMUST00000069168 Slc24a1Q91WD8 1130 aa9.61□□□□□ -0.87
Cpsf6-201ENSMUST00000069168 Ccdc18Q640L5 1455 aa9.6□□□□□ -0.87
Cpsf6-201ENSMUST00000069168 Tiam1Q60610 1591 aa9.58□□□□□ -0.88
Cpsf6-201ENSMUST00000069168 1700123L14RikQ3V2K7 440 aa9.57□□□□□ -0.88
Cpsf6-201ENSMUST00000069168 Kif15Q6P9L6 1387 aa9.57□□□□□ -0.88
Cpsf6-201ENSMUST00000069168 Eea1Q8BL66 1411 aa9.57□□□□□ -0.88
Cpsf6-201ENSMUST00000069168 Mroh2bQ7M6Y6 1581 aa9.55□□□□□ -0.88
Cpsf6-201ENSMUST00000069168 Ankrd26Q811D2 1581 aa9.55□□□□□ -0.88
Cpsf6-201ENSMUST00000069168 Lmo7E9PYF4 1699 aaKnown RBP9.55□□□□□ -0.88
Cpsf6-201ENSMUST00000069168 Grin2bQ01097 1482 aa9.55□□□□□ -0.88
Cpsf6-201ENSMUST00000069168 Anp32bQ9EST5 272 aaKnown RBP9.54□□□□□ -0.88
Cpsf6-201ENSMUST00000069168 AqrQ8CFQ3 1481 aaKnown RBP9.54□□□□□ -0.88
Cpsf6-201ENSMUST00000069168 Naip1Q9QWK5 1403 aa9.53□□□□□ -0.88
Cpsf6-201ENSMUST00000069168 Kif21aQ9QXL2 1672 aa9.5□□□□□ -0.89
Cpsf6-201ENSMUST00000069168 Slx4Q6P1D7 1565 aa9.5□□□□□ -0.89
Cpsf6-201ENSMUST00000069168 DiexfQ8BTT6 772 aaKnown RBP9.49□□□□□ -0.89
Cpsf6-201ENSMUST00000069168 Npm1Q61937 292 aaKnown RBP9.49□□□□□ -0.89
Cpsf6-201ENSMUST00000069168 Pcf11G3X9Z4 1553 aa9.49□□□□□ -0.89
Cpsf6-201ENSMUST00000069168 NeflP08551 543 aa9.49□□□□□ -0.89
Cpsf6-201ENSMUST00000069168 Mrc2Q64449 1479 aa9.49□□□□□ -0.89
Cpsf6-201ENSMUST00000069168 Cux2P70298 1426 aa9.48□□□□□ -0.89
Cpsf6-201ENSMUST00000069168 Eif5bQ05D44 1216 aaKnown RBP9.48□□□□□ -0.89
Cpsf6-201ENSMUST00000069168 Setd5Q5XJV7 1441 aa9.48□□□□□ -0.89
Cpsf6-201ENSMUST00000069168 Peg3Q3URU2 1571 aa9.46□□□□□ -0.89
Cpsf6-201ENSMUST00000069168 3425401B19RikD3Z1D3 1412 aa9.46□□□□□ -0.89
Cpsf6-201ENSMUST00000069168 Baz1bQ9Z277 1479 aa9.46□□□□□ -0.9
Cpsf6-201ENSMUST00000069168 Eid3Q3V124 375 aa9.45□□□□□ -0.9
Cpsf6-201ENSMUST00000069168 Cux1P53564 1515 aa9.45□□□□□ -0.9
Cpsf6-201ENSMUST00000069168 Lmod2Q3UHZ5 550 aa9.44□□□□□ -0.9
Cpsf6-201ENSMUST00000069168 BlmO88700 1416 aa9.43□□□□□ -0.9
Cpsf6-201ENSMUST00000069168 Calr4Q3TQS0 420 aa9.43□□□□□ -0.9
Cpsf6-201ENSMUST00000069168 Urb2E9Q7L1 1524 aaKnown RBP9.42□□□□□ -0.9
Cpsf6-201ENSMUST00000069168 Amer1Q7TS75 1132 aa9.42□□□□□ -0.9
Cpsf6-201ENSMUST00000069168 Lrriq1Q0P5X1 1673 aa9.42□□□□□ -0.9
Cpsf6-201ENSMUST00000069168 Gm38655A0A286YDK6 273 aa9.41□□□□□ -0.9
Cpsf6-201ENSMUST00000069168 Efcab5A0JP43 1406 aa9.4□□□□□ -0.9
Cpsf6-201ENSMUST00000069168 Rpap1Q80TE0 1409 aa9.39□□□□□ -0.91
Cpsf6-201ENSMUST00000069168 UacaQ8CGB3 1411 aa9.39□□□□□ -0.91
Cpsf6-201ENSMUST00000069168 Dennd4bQ3U1Y4 1499 aa9.38□□□□□ -0.91
Cpsf6-201ENSMUST00000069168 Mia2Q91ZV0 1396 aa9.38□□□□□ -0.91
Cpsf6-201ENSMUST00000069168 Gm1043A0A140LJC2 1431 aa9.38□□□□□ -0.91
Cpsf6-201ENSMUST00000069168 Crocc2F6XLV1 1638 aa9.37□□□□□ -0.91
Cpsf6-201ENSMUST00000069168 Carmil1Q6EDY6 1374 aa9.37□□□□□ -0.91
Cpsf6-201ENSMUST00000069168 4933416C03RikQ3V063 378 aa9.37□□□□□ -0.91
Cpsf6-201ENSMUST00000069168 CntlnA2AM05 1397 aa9.36□□□□□ -0.91
Cpsf6-201ENSMUST00000069168 Fhad1A6PWD2 1420 aa9.36□□□□□ -0.91
Cpsf6-201ENSMUST00000069168 PogzQ8BZH4 1409 aaKnown RBP9.36□□□□□ -0.91
Cpsf6-201ENSMUST00000069168 Ankrd36D3Z4K0 1415 aa9.35□□□□□ -0.91
Cpsf6-201ENSMUST00000069168 Samd9lQ69Z37 1561 aa9.35□□□□□ -0.91
Cpsf6-201ENSMUST00000069168 Dhx29Q6PGC1 1365 aaKnown RBP9.34□□□□□ -0.91
Cpsf6-201ENSMUST00000069168 Cul7Q8VE73 1689 aa9.34□□□□□ -0.91
Cpsf6-201ENSMUST00000069168 Camsap2Q8C1B1 1461 aa9.34□□□□□ -0.91
Cpsf6-201ENSMUST00000069168 Duox2A2AQ99 1517 aa9.34□□□□□ -0.91
Cpsf6-201ENSMUST00000069168 Gm13697A2AK42 830 aa9.33□□□□□ -0.92
Cpsf6-201ENSMUST00000069168 Mapk8ip2Q9ERE9 830 aa9.33□□□□□ -0.92
Cpsf6-201ENSMUST00000069168 Fhod3Q76LL6 1578 aa9.33□□□□□ -0.92
Cpsf6-201ENSMUST00000069168 Naip2Q9QUK4 1447 aa9.33□□□□□ -0.92
Cpsf6-201ENSMUST00000069168 Ttbk1Q6PCN3 1308 aa9.33□□□□□ -0.92
Cpsf6-201ENSMUST00000069168 Wdr43Q6ZQL4 677 aaKnown RBP9.33□□□□□ -0.92
Cpsf6-201ENSMUST00000069168 SynmQ70IV5 1561 aa9.33□□□□□ -0.92
Cpsf6-201ENSMUST00000069168 Vps8Q0P5W1 1427 aa9.32□□□□□ -0.92
Cpsf6-201ENSMUST00000069168 Gm7298A0A0N4SVU1 1476 aa9.32□□□□□ -0.92
Cpsf6-201ENSMUST00000069168 Fam71e1A1L3C1 212 aa9.32□□□□□ -0.92
Cpsf6-201ENSMUST00000069168 LrpprcQ6PB66 1392 aaKnown RBP9.32□□□□□ -0.92
Cpsf6-201ENSMUST00000069168 Upf2A2AT37 1269 aaKnown RBP9.31□□□□□ -0.92
Cpsf6-201ENSMUST00000069168 Ccdc9Q8VC31 543 aaKnown RBP9.31□□□□□ -0.92
Cpsf6-201ENSMUST00000069168 Lmtk2Q3TYD6 1471 aa9.31□□□□□ -0.92
Cpsf6-201ENSMUST00000069168 Setbp1Q9Z180 1582 aa9.3□□□□□ -0.92
Cpsf6-201ENSMUST00000069168 Fyco1Q8VDC1 1437 aa9.3□□□□□ -0.92
Cpsf6-201ENSMUST00000069168 Ppp4r2Q0VGB7 417 aa9.3□□□□□ -0.92
Cpsf6-201ENSMUST00000069168 Hdac5Q9Z2V6 1113 aa9.3□□□□□ -0.92
Cpsf6-201ENSMUST00000069168 A2mQ6GQT1 1474 aa9.28□□□□□ -0.92
Cpsf6-201ENSMUST00000069168 Ncoa2Q61026 1462 aa9.28□□□□□ -0.92
Cpsf6-201ENSMUST00000069168 Hnrnpul2Q00PI9 745 aaKnown RBP9.28□□□□□ -0.92
Cpsf6-201ENSMUST00000069168 Znf710Q3U288 666 aa9.28□□□□□ -0.92
Cpsf6-201ENSMUST00000069168 Naip5Q9R016 1403 aa9.27□□□□□ -0.93
Cpsf6-201ENSMUST00000069168 Polr1aO35134 1717 aaKnown RBP9.27□□□□□ -0.93
Cpsf6-201ENSMUST00000069168 Plb1Q3TTY0 1478 aa9.25□□□□□ -0.93
Cpsf6-201ENSMUST00000069168 Abca5Q8K448 1642 aa9.25□□□□□ -0.93
Cpsf6-201ENSMUST00000069168 Mrs2Q5NCE8 434 aa9.24□□□□□ -0.93
Cpsf6-201ENSMUST00000069168 Gpatch8A2A6A1 1505 aa9.24□□□□□ -0.93
Cpsf6-201ENSMUST00000069168 Pprc1Q6NZN1 1644 aa9.24□□□□□ -0.93
Cpsf6-201ENSMUST00000069168 Gcc2Q8CHG3 1679 aa9.24□□□□□ -0.93
Cpsf6-201ENSMUST00000069168 Aebp1Q640N1 1128 aa9.23□□□□□ -0.93
Cpsf6-201ENSMUST00000069168 Pla2r1Q62028 1487 aa9.23□□□□□ -0.93
Cpsf6-201ENSMUST00000069168 Hspa5P20029 655 aaKnown RBP9.22□□□□□ -0.93
Cpsf6-201ENSMUST00000069168 Magi3Q9EQJ9 1476 aa9.22□□□□□ -0.93
Cpsf6-201ENSMUST00000069168 Setd1bQ8CFT2 1985 aa9.21□□□□□ -0.93
Cpsf6-201ENSMUST00000069168 Rad54l2Q99NG0 1466 aa9.21□□□□□ -0.94
Cpsf6-201ENSMUST00000069168 Cwc22Q8C5N3 908 aaKnown RBP9.21□□□□□ -0.94
Cpsf6-201ENSMUST00000069168 4930567H17RikQ3V0K5 233 aa9.2□□□□□ -0.94
Cpsf6-201ENSMUST00000069168 Chic2Q9D9G3 165 aa9.2□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms