RNA–Protein interactions for RNA: ENSMUST00000034928.11

Tpm1-202, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 1,824 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-202ENSMUST00000034928 PogzQ8BZH4 1409 aaKnown RBP20.81■□□□□ 0.92
Tpm1-202ENSMUST00000034928 Naip1Q9QWK5 1403 aa20.81■□□□□ 0.92
Tpm1-202ENSMUST00000034928 Kdm5bQ80Y84 1544 aa20.79■□□□□ 0.92
Tpm1-202ENSMUST00000034928 CntlnA2AM05 1397 aa20.78■□□□□ 0.92
Tpm1-202ENSMUST00000034928 Neurod1Q60867 357 aa20.76■□□□□ 0.91
Tpm1-202ENSMUST00000034928 Lmo7E9PYF4 1699 aaKnown RBP20.74■□□□□ 0.91
Tpm1-202ENSMUST00000034928 Duox2A2AQ99 1517 aa20.74■□□□□ 0.91
Tpm1-202ENSMUST00000034928 Rpap1Q80TE0 1409 aa20.73■□□□□ 0.91
Tpm1-202ENSMUST00000034928 Peg3Q3URU2 1571 aa20.72■□□□□ 0.91
Tpm1-202ENSMUST00000034928 Wdr66E9Q743 1299 aa20.72■□□□□ 0.91
Tpm1-202ENSMUST00000034928 Aebp2Q9Z248 504 aaKnown RBP20.72■□□□□ 0.91
Tpm1-202ENSMUST00000034928 Pcf11G3X9Z4 1553 aa20.72■□□□□ 0.91
Tpm1-202ENSMUST00000034928 BlmO88700 1416 aa20.7■□□□□ 0.9
Tpm1-202ENSMUST00000034928 Polr1aO35134 1717 aaKnown RBP20.7■□□□□ 0.9
Tpm1-202ENSMUST00000034928 Fyco1Q8VDC1 1437 aa20.67■□□□□ 0.9
Tpm1-202ENSMUST00000034928 SynmQ70IV5 1561 aa20.66■□□□□ 0.9
Tpm1-202ENSMUST00000034928 Mrc2Q64449 1479 aa20.66■□□□□ 0.9
Tpm1-202ENSMUST00000034928 Ap3b1Q9Z1T1 1105 aa20.65■□□□□ 0.9
Tpm1-202ENSMUST00000034928 Urb2E9Q7L1 1524 aaKnown RBP20.64■□□□□ 0.9
Tpm1-202ENSMUST00000034928 Slx4Q6P1D7 1565 aa20.63■□□□□ 0.89
Tpm1-202ENSMUST00000034928 Cux1P53564 1515 aa20.63■□□□□ 0.89
Tpm1-202ENSMUST00000034928 Anks4bQ8K3X6 423 aa20.62■□□□□ 0.89
Tpm1-202ENSMUST00000034928 Ccer2J3QPU5 274 aa20.58■□□□□ 0.89
Tpm1-202ENSMUST00000034928 Dhx29Q6PGC1 1365 aaKnown RBP20.56■□□□□ 0.88
Tpm1-202ENSMUST00000034928 Mia2Q91ZV0 1396 aa20.55■□□□□ 0.88
Tpm1-202ENSMUST00000034928 Samd9lQ69Z37 1561 aa20.53■□□□□ 0.88
Tpm1-202ENSMUST00000034928 Cdk11bP24788 784 aaKnown RBP20.52■□□□□ 0.88
Tpm1-202ENSMUST00000034928 Fhad1A6PWD2 1420 aa20.51■□□□□ 0.87
Tpm1-202ENSMUST00000034928 Nop58Q6DFW4 536 aaKnown RBP20.49■□□□□ 0.87
Tpm1-202ENSMUST00000034928 Aebp1Q640N1 1128 aa20.48■□□□□ 0.87
Tpm1-202ENSMUST00000034928 Ankrd36D3Z4K0 1415 aa20.47■□□□□ 0.87
Tpm1-202ENSMUST00000034928 Crocc2F6XLV1 1638 aa20.47■□□□□ 0.87
Tpm1-202ENSMUST00000034928 Gm1043A0A140LJC2 1431 aa20.45■□□□□ 0.86
Tpm1-202ENSMUST00000034928 3425401B19RikD3Z1D3 1412 aa20.44■□□□□ 0.86
Tpm1-202ENSMUST00000034928 Vps8Q0P5W1 1427 aa20.44■□□□□ 0.86
Tpm1-202ENSMUST00000034928 Kif21aQ9QXL2 1672 aa20.39■□□□□ 0.86
Tpm1-202ENSMUST00000034928 EprsQ8CGC7 1512 aaKnown RBP20.39■□□□□ 0.85
Tpm1-202ENSMUST00000034928 UacaQ8CGB3 1411 aa20.39■□□□□ 0.85
Tpm1-202ENSMUST00000034928 Rad54l2Q99NG0 1466 aa20.38■□□□□ 0.85
Tpm1-202ENSMUST00000034928 Naip2Q9QUK4 1447 aa20.37■□□□□ 0.85
Tpm1-202ENSMUST00000034928 Gm7298A0A0N4SVU1 1476 aa20.36■□□□□ 0.85
Tpm1-202ENSMUST00000034928 Lmtk2Q3TYD6 1471 aa20.35■□□□□ 0.85
Tpm1-202ENSMUST00000034928 Pla2r1Q62028 1487 aa20.35■□□□□ 0.85
Tpm1-202ENSMUST00000034928 Abca5Q8K448 1642 aa20.34■□□□□ 0.85
Tpm1-202ENSMUST00000034928 Gpatch8A2A6A1 1505 aa20.33■□□□□ 0.85
Tpm1-202ENSMUST00000034928 Lmod2Q3UHZ5 550 aa20.32■□□□□ 0.84
Tpm1-202ENSMUST00000034928 Fam50aQ9WV03 339 aaKnown RBP20.32■□□□□ 0.84
Tpm1-202ENSMUST00000034928 CadpsQ80TJ1 1355 aa20.32■□□□□ 0.84
Tpm1-202ENSMUST00000034928 Eid3Q3V124 375 aa20.31■□□□□ 0.84
Tpm1-202ENSMUST00000034928 Magi3Q9EQJ9 1476 aa20.3■□□□□ 0.84
Tpm1-202ENSMUST00000034928 Camsap2Q8C1B1 1461 aa20.29■□□□□ 0.84
Tpm1-202ENSMUST00000034928 Fhod3Q76LL6 1578 aa20.26■□□□□ 0.83
Tpm1-202ENSMUST00000034928 Adamts12Q811B3 1600 aa20.25■□□□□ 0.83
Tpm1-202ENSMUST00000034928 Grin2aP35436 1464 aa20.24■□□□□ 0.83
Tpm1-202ENSMUST00000034928 Soga1E1U8D0 1418 aa20.23■□□□□ 0.83
Tpm1-202ENSMUST00000034928 A2mQ6GQT1 1474 aa20.23■□□□□ 0.83
Tpm1-202ENSMUST00000034928 Kif27Q7M6Z4 1394 aa20.22■□□□□ 0.83
Tpm1-202ENSMUST00000034928 Gcc2Q8CHG3 1679 aa20.21■□□□□ 0.83
Tpm1-202ENSMUST00000034928 Ccnb3Q810T2 1396 aa20.21■□□□□ 0.83
Tpm1-202ENSMUST00000034928 Disp1Q3TDN0 1521 aa20.2■□□□□ 0.82
Tpm1-202ENSMUST00000034928 Pbrm1Q8BSQ9 1634 aaKnown RBP20.2■□□□□ 0.82
Tpm1-202ENSMUST00000034928 Rfx7F8VPJ6 1459 aa20.18■□□□□ 0.82
Tpm1-202ENSMUST00000034928 Plb1Q3TTY0 1478 aa20.17■□□□□ 0.82
Tpm1-202ENSMUST00000034928 Gm13697A2AK42 830 aa20.17■□□□□ 0.82
Tpm1-202ENSMUST00000034928 Ift140E9PY46 1464 aa20.16■□□□□ 0.82
Tpm1-202ENSMUST00000034928 Cul7Q8VE73 1689 aa20.15■□□□□ 0.82
Tpm1-202ENSMUST00000034928 WizO88286 1684 aaKnown RBP20.13■□□□□ 0.81
Tpm1-202ENSMUST00000034928 Lrriq1Q0P5X1 1673 aa20.13■□□□□ 0.81
Tpm1-202ENSMUST00000034928 NclP09405 707 aaKnown RBP20.12■□□□□ 0.81
Tpm1-202ENSMUST00000034928 Ppargc1bQ8VHJ7 1014 aa20.12■□□□□ 0.81
Tpm1-202ENSMUST00000034928 Dennd4bQ3U1Y4 1499 aa20.1■□□□□ 0.81
Tpm1-202ENSMUST00000034928 Nup160Q9Z0W3 1402 aaKnown RBP20.1■□□□□ 0.81
Tpm1-202ENSMUST00000034928 NexmifQ5DTT1 1515 aa20.09■□□□□ 0.81
Tpm1-202ENSMUST00000034928 Hspa5P20029 655 aaKnown RBP20.06■□□□□ 0.8
Tpm1-202ENSMUST00000034928 Aplp2Q06335 707 aa20.06■□□□□ 0.8
Tpm1-202ENSMUST00000034928 BC005561E9Q5E2 1589 aa20.05■□□□□ 0.8
Tpm1-202ENSMUST00000034928 Tnnt3Q9QZ47 272 aa20.05■□□□□ 0.8
Tpm1-202ENSMUST00000034928 Naip5Q9R016 1403 aa20.05■□□□□ 0.8
Tpm1-202ENSMUST00000034928 Stra8P70278 393 aa20.04■□□□□ 0.8
Tpm1-202ENSMUST00000034928 Setbp1Q9Z180 1582 aa20.04■□□□□ 0.8
Tpm1-202ENSMUST00000034928 Abca16E9PWJ7 1678 aa20.01■□□□□ 0.79
Tpm1-202ENSMUST00000034928 Csrnp3P59055 597 aa20.01■□□□□ 0.79
Tpm1-202ENSMUST00000034928 Mug1P28665 1476 aa20.01■□□□□ 0.79
Tpm1-202ENSMUST00000034928 PxdnQ3UQ28 1475 aa20.01■□□□□ 0.79
Tpm1-202ENSMUST00000034928 Ncoa2Q61026 1462 aa20.01■□□□□ 0.79
Tpm1-202ENSMUST00000034928 Cc2d2bA0A286YDU8 1405 aa20■□□□□ 0.79
Tpm1-202ENSMUST00000034928 Rapgef6Q5NCJ1 1609 aa20■□□□□ 0.79
Tpm1-202ENSMUST00000034928 WrnO09053 1401 aa19.98■□□□□ 0.79
Tpm1-202ENSMUST00000034928 Setd1bQ8CFT2 1985 aa19.96■□□□□ 0.79
Tpm1-202ENSMUST00000034928 Dhx57Q6P5D3 1388 aaKnown RBP19.95■□□□□ 0.78
Tpm1-202ENSMUST00000034928 Plekhh2Q8C115 1491 aa19.95■□□□□ 0.78
Tpm1-202ENSMUST00000034928 Il16O54824 1322 aa19.95■□□□□ 0.78
Tpm1-202ENSMUST00000034928 Mphosph9A6H5Y1 991 aa19.94■□□□□ 0.78
Tpm1-202ENSMUST00000034928 Abcc5Q9R1X5 1436 aa19.93■□□□□ 0.78
Tpm1-202ENSMUST00000034928 Ncoa3O09000 1398 aa19.93■□□□□ 0.78
Tpm1-202ENSMUST00000034928 1700123L14RikQ3V2K7 440 aa19.93■□□□□ 0.78
Tpm1-202ENSMUST00000034928 Chic2Q9D9G3 165 aa19.92■□□□□ 0.78
Tpm1-202ENSMUST00000034928 Ube2uB1AUC4 352 aa19.92■□□□□ 0.78
Tpm1-202ENSMUST00000034928 Kiaa1551Q5DTW7 1521 aa19.91■□□□□ 0.78
Tpm1-202ENSMUST00000034928 Shroom2A2ALU4 1481 aa19.9■□□□□ 0.78
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms