RNA–Protein interactions for RNA: ENSMUST00000017153.3

Sdc4-201, Transcript of Syndecan-4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc4, Length 2,458 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4-201ENSMUST00000017153 Ccdc18Q640L5 1455 aa18.04■□□□□ 0.48
Sdc4-201ENSMUST00000017153 Camsap1A2AHC3 1581 aa18.02■□□□□ 0.48
Sdc4-201ENSMUST00000017153 Cdk11bP24788 784 aaKnown RBP17.98■□□□□ 0.47
Sdc4-201ENSMUST00000017153 Cux2P70298 1426 aa17.97■□□□□ 0.47
Sdc4-201ENSMUST00000017153 Arhgap35Q91YM2 1499 aa17.96■□□□□ 0.47
Sdc4-201ENSMUST00000017153 Plekhg3Q4VAC9 1341 aa17.96■□□□□ 0.47
Sdc4-201ENSMUST00000017153 Aebp2Q9Z248 504 aaKnown RBP17.95■□□□□ 0.46
Sdc4-201ENSMUST00000017153 NrkQ9R0G8 1455 aa17.95■□□□□ 0.46
Sdc4-201ENSMUST00000017153 Wdr66E9Q743 1299 aa17.94■□□□□ 0.46
Sdc4-201ENSMUST00000017153 Dnajc5bQ9CQ94 199 aa17.92■□□□□ 0.46
Sdc4-201ENSMUST00000017153 PtprkP35822 1457 aa17.92■□□□□ 0.46
Sdc4-201ENSMUST00000017153 Ncapd3Q6ZQK0 1506 aa17.91■□□□□ 0.46
Sdc4-201ENSMUST00000017153 Grin2bQ01097 1482 aa17.88■□□□□ 0.45
Sdc4-201ENSMUST00000017153 Shroom4Q1W617 1475 aa17.87■□□□□ 0.45
Sdc4-201ENSMUST00000017153 Npm1Q61937 292 aaKnown RBP17.87■□□□□ 0.45
Sdc4-201ENSMUST00000017153 ClspnQ80YR7 1315 aa17.86■□□□□ 0.45
Sdc4-201ENSMUST00000017153 Ncbp3Q8BZR9 615 aaKnown RBP17.86■□□□□ 0.45
Sdc4-201ENSMUST00000017153 TonslQ6NZL6 1363 aa17.86■□□□□ 0.45
Sdc4-201ENSMUST00000017153 Eea1Q8BL66 1411 aa17.84■□□□□ 0.45
Sdc4-201ENSMUST00000017153 Arap1Q4LDD4 1452 aa17.83■□□□□ 0.45
Sdc4-201ENSMUST00000017153 Il27Q8K3I6 234 aa17.82■□□□□ 0.44
Sdc4-201ENSMUST00000017153 Zfp777B9EKF4 885 aa17.81■□□□□ 0.44
Sdc4-201ENSMUST00000017153 Mrc2Q64449 1479 aa17.81■□□□□ 0.44
Sdc4-201ENSMUST00000017153 LrpprcQ6PB66 1392 aaKnown RBP17.8■□□□□ 0.44
Sdc4-201ENSMUST00000017153 Map3k1P53349 1493 aa17.79■□□□□ 0.44
Sdc4-201ENSMUST00000017153 Efcab5A0JP43 1406 aa17.78■□□□□ 0.44
Sdc4-201ENSMUST00000017153 Arhgef5E9Q7D5 1581 aa17.78■□□□□ 0.44
Sdc4-201ENSMUST00000017153 PogzQ8BZH4 1409 aaKnown RBP17.76■□□□□ 0.43
Sdc4-201ENSMUST00000017153 Setd5Q5XJV7 1441 aa17.75■□□□□ 0.43
Sdc4-201ENSMUST00000017153 Q8BT18 775 aa17.73■□□□□ 0.43
Sdc4-201ENSMUST00000017153 Ap3b1Q9Z1T1 1105 aa17.72■□□□□ 0.43
Sdc4-201ENSMUST00000017153 Nop58Q6DFW4 536 aaKnown RBP17.67■□□□□ 0.42
Sdc4-201ENSMUST00000017153 Duox2A2AQ99 1517 aa17.67■□□□□ 0.42
Sdc4-201ENSMUST00000017153 Kdm5bQ80Y84 1544 aa17.67■□□□□ 0.42
Sdc4-201ENSMUST00000017153 Ppargc1bQ8VHJ7 1014 aa17.67■□□□□ 0.42
Sdc4-201ENSMUST00000017153 Tiam1Q60610 1591 aa17.67■□□□□ 0.42
Sdc4-201ENSMUST00000017153 Mroh2bQ7M6Y6 1581 aa17.66■□□□□ 0.42
Sdc4-201ENSMUST00000017153 Dhx29Q6PGC1 1365 aaKnown RBP17.66■□□□□ 0.42
Sdc4-201ENSMUST00000017153 Slc4a1apE9PX68 744 aa17.65■□□□□ 0.42
Sdc4-201ENSMUST00000017153 Ube2q2Q8K2Z8 378 aa17.65■□□□□ 0.42
Sdc4-201ENSMUST00000017153 AqrQ8CFQ3 1481 aaKnown RBP17.64■□□□□ 0.41
Sdc4-201ENSMUST00000017153 Erich3F6QRE9 1637 aa17.64■□□□□ 0.41
Sdc4-201ENSMUST00000017153 Ankrd26Q811D2 1581 aa17.62■□□□□ 0.41
Sdc4-201ENSMUST00000017153 Naip1Q9QWK5 1403 aa17.59■□□□□ 0.41
Sdc4-201ENSMUST00000017153 TchhA0A0B4J1F9 1599 aa17.59■□□□□ 0.41
Sdc4-201ENSMUST00000017153 Kif21aQ9QXL2 1672 aa17.57■□□□□ 0.4
Sdc4-201ENSMUST00000017153 Crocc2F6XLV1 1638 aa17.57■□□□□ 0.4
Sdc4-201ENSMUST00000017153 Fam71e1A1L3C1 212 aa17.55■□□□□ 0.4
Sdc4-201ENSMUST00000017153 Pcf11G3X9Z4 1553 aa17.55■□□□□ 0.4
Sdc4-201ENSMUST00000017153 BlmO88700 1416 aa17.54■□□□□ 0.4
Sdc4-201ENSMUST00000017153 Carmil1Q6EDY6 1374 aa17.53■□□□□ 0.4
Sdc4-201ENSMUST00000017153 Eid3Q3V124 375 aa17.53■□□□□ 0.4
Sdc4-201ENSMUST00000017153 Plcd4Q8K3R3 807 aa17.53■□□□□ 0.4
Sdc4-201ENSMUST00000017153 Slx4Q6P1D7 1565 aa17.52■□□□□ 0.4
Sdc4-201ENSMUST00000017153 SynmQ70IV5 1561 aa17.5■□□□□ 0.39
Sdc4-201ENSMUST00000017153 Samd9lQ69Z37 1561 aa17.49■□□□□ 0.39
Sdc4-201ENSMUST00000017153 Lmo7E9PYF4 1699 aaKnown RBP17.49■□□□□ 0.39
Sdc4-201ENSMUST00000017153 Gtf3c3Q3TMP1 882 aa17.48■□□□□ 0.39
Sdc4-201ENSMUST00000017153 Cux1P53564 1515 aa17.44■□□□□ 0.38
Sdc4-201ENSMUST00000017153 Rpap1Q80TE0 1409 aa17.44■□□□□ 0.38
Sdc4-201ENSMUST00000017153 CntlnA2AM05 1397 aa17.44■□□□□ 0.38
Sdc4-201ENSMUST00000017153 Polr1aO35134 1717 aaKnown RBP17.42■□□□□ 0.38
Sdc4-201ENSMUST00000017153 Fbxo3Q9DC63 480 aa17.41■□□□□ 0.38
Sdc4-201ENSMUST00000017153 Plb1Q3TTY0 1478 aa17.41■□□□□ 0.38
Sdc4-201ENSMUST00000017153 Ift140E9PY46 1464 aa17.38■□□□□ 0.37
Sdc4-201ENSMUST00000017153 Urb2E9Q7L1 1524 aaKnown RBP17.38■□□□□ 0.37
Sdc4-201ENSMUST00000017153 Peg3Q3URU2 1571 aa17.38■□□□□ 0.37
Sdc4-201ENSMUST00000017153 Samd1D3YXK1 519 aa17.38■□□□□ 0.37
Sdc4-201ENSMUST00000017153 Lmod2Q3UHZ5 550 aa17.38■□□□□ 0.37
Sdc4-201ENSMUST00000017153 Fam50aQ9WV03 339 aaKnown RBP17.37■□□□□ 0.37
Sdc4-201ENSMUST00000017153 Rad54l2Q99NG0 1466 aa17.36■□□□□ 0.37
Sdc4-201ENSMUST00000017153 Gpatch8A2A6A1 1505 aa17.36■□□□□ 0.37
Sdc4-201ENSMUST00000017153 3425401B19RikD3Z1D3 1412 aa17.35■□□□□ 0.37
Sdc4-201ENSMUST00000017153 Fyco1Q8VDC1 1437 aa17.35■□□□□ 0.37
Sdc4-201ENSMUST00000017153 Znf326O88291 580 aa17.35■□□□□ 0.37
Sdc4-201ENSMUST00000017153 Rbm10Q99KG3 930 aaKnown RBP17.35■□□□□ 0.37
Sdc4-201ENSMUST00000017153 Pbrm1Q8BSQ9 1634 aaKnown RBP17.34■□□□□ 0.37
Sdc4-201ENSMUST00000017153 Disp1Q3TDN0 1521 aa17.34■□□□□ 0.37
Sdc4-201ENSMUST00000017153 Rtl5Q5DTT4 599 aa17.33■□□□□ 0.36
Sdc4-201ENSMUST00000017153 Magi3Q9EQJ9 1476 aa17.32■□□□□ 0.36
Sdc4-201ENSMUST00000017153 4930567H17RikQ3V0K5 233 aa17.32■□□□□ 0.36
Sdc4-201ENSMUST00000017153 Pla2r1Q62028 1487 aa17.31■□□□□ 0.36
Sdc4-201ENSMUST00000017153 Grin2aP35436 1464 aa17.3■□□□□ 0.36
Sdc4-201ENSMUST00000017153 Tshz2Q68FE9 1030 aa17.3■□□□□ 0.36
Sdc4-201ENSMUST00000017153 Fhad1A6PWD2 1420 aa17.3■□□□□ 0.36
Sdc4-201ENSMUST00000017153 Mia2Q91ZV0 1396 aa17.28■□□□□ 0.36
Sdc4-201ENSMUST00000017153 Lrriq1Q0P5X1 1673 aa17.28■□□□□ 0.36
Sdc4-201ENSMUST00000017153 EprsQ8CGC7 1512 aaKnown RBP17.28■□□□□ 0.36
Sdc4-201ENSMUST00000017153 AampJ3QN89 436 aa17.27■□□□□ 0.36
Sdc4-201ENSMUST00000017153 Aebp1Q640N1 1128 aa17.27■□□□□ 0.35
Sdc4-201ENSMUST00000017153 Nup160Q9Z0W3 1402 aaKnown RBP17.27■□□□□ 0.35
Sdc4-201ENSMUST00000017153 Gm1043A0A140LJC2 1431 aa17.26■□□□□ 0.35
Sdc4-201ENSMUST00000017153 Ipo4Q8VI75 1082 aa17.26■□□□□ 0.35
Sdc4-201ENSMUST00000017153 Ankrd36D3Z4K0 1415 aa17.25■□□□□ 0.35
Sdc4-201ENSMUST00000017153 Ccer2J3QPU5 274 aa17.25■□□□□ 0.35
Sdc4-201ENSMUST00000017153 Vps8Q0P5W1 1427 aa17.25■□□□□ 0.35
Sdc4-201ENSMUST00000017153 UacaQ8CGB3 1411 aa17.25■□□□□ 0.35
Sdc4-201ENSMUST00000017153 NclP09405 707 aaKnown RBP17.23■□□□□ 0.35
Sdc4-201ENSMUST00000017153 Gm7298A0A0N4SVU1 1476 aa17.22■□□□□ 0.35
Sdc4-201ENSMUST00000017153 Anp32bQ9EST5 272 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms