RNA–Protein interactions for RNA: ENSMUST00000008088.8

Ttc9b-201, Transcript of Tetratricopeptide repeat protein 9B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ttc9b, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc9b-201ENSMUST00000008088 Cux1P53564 1515 aa29.93■■■□□ 2.38
Ttc9b-201ENSMUST00000008088 Rad54l2Q99NG0 1466 aa29.91■■■□□ 2.38
Ttc9b-201ENSMUST00000008088 Pcf11G3X9Z4 1553 aa29.89■■■□□ 2.38
Ttc9b-201ENSMUST00000008088 Tiam1Q60610 1591 aa29.89■■■□□ 2.38
Ttc9b-201ENSMUST00000008088 Lmo7E9PYF4 1699 aaKnown RBP29.84■■■□□ 2.37
Ttc9b-201ENSMUST00000008088 Ncapd3Q6ZQK0 1506 aa29.82■■■□□ 2.36
Ttc9b-201ENSMUST00000008088 Naip1Q9QWK5 1403 aa29.8■■■□□ 2.36
Ttc9b-201ENSMUST00000008088 Urb2E9Q7L1 1524 aaKnown RBP29.78■■■□□ 2.36
Ttc9b-201ENSMUST00000008088 Plb1Q3TTY0 1478 aa29.77■■■□□ 2.36
Ttc9b-201ENSMUST00000008088 Slx4Q6P1D7 1565 aa29.75■■■□□ 2.35
Ttc9b-201ENSMUST00000008088 Fyco1Q8VDC1 1437 aa29.73■■■□□ 2.35
Ttc9b-201ENSMUST00000008088 Polr1aO35134 1717 aaKnown RBP29.72■■■□□ 2.35
Ttc9b-201ENSMUST00000008088 Pla2r1Q62028 1487 aa29.71■■■□□ 2.35
Ttc9b-201ENSMUST00000008088 Pcgf6Q99NA9 353 aa29.69■■■□□ 2.34
Ttc9b-201ENSMUST00000008088 Magi3Q9EQJ9 1476 aa29.68■■■□□ 2.34
Ttc9b-201ENSMUST00000008088 BlmO88700 1416 aa29.68■■■□□ 2.34
Ttc9b-201ENSMUST00000008088 Lrriq1Q0P5X1 1673 aa29.66■■■□□ 2.34
Ttc9b-201ENSMUST00000008088 CntlnA2AM05 1397 aa29.64■■■□□ 2.34
Ttc9b-201ENSMUST00000008088 EprsQ8CGC7 1512 aaKnown RBP29.63■■■□□ 2.33
Ttc9b-201ENSMUST00000008088 Rpap1Q80TE0 1409 aa29.61■■■□□ 2.33
Ttc9b-201ENSMUST00000008088 Grin2aP35436 1464 aa29.6■■■□□ 2.33
Ttc9b-201ENSMUST00000008088 Disp1Q3TDN0 1521 aa29.6■■■□□ 2.33
Ttc9b-201ENSMUST00000008088 Peg3Q3URU2 1571 aa29.58■■■□□ 2.33
Ttc9b-201ENSMUST00000008088 Supt5hO55201 1082 aaKnown RBP29.56■■■□□ 2.32
Ttc9b-201ENSMUST00000008088 Aebp1Q640N1 1128 aa29.53■■■□□ 2.32
Ttc9b-201ENSMUST00000008088 Lmod2Q3UHZ5 550 aa29.52■■■□□ 2.32
Ttc9b-201ENSMUST00000008088 Ift140E9PY46 1464 aa29.49■■■□□ 2.31
Ttc9b-201ENSMUST00000008088 Abca5Q8K448 1642 aa29.48■■■□□ 2.31
Ttc9b-201ENSMUST00000008088 CadpsQ80TJ1 1355 aa29.47■■■□□ 2.31
Ttc9b-201ENSMUST00000008088 Gm7298A0A0N4SVU1 1476 aa29.45■■■□□ 2.3
Ttc9b-201ENSMUST00000008088 WizO88286 1684 aaKnown RBP29.44■■■□□ 2.3
Ttc9b-201ENSMUST00000008088 Setd1bQ8CFT2 1985 aa29.43■■■□□ 2.3
Ttc9b-201ENSMUST00000008088 Gm1043A0A140LJC2 1431 aa29.42■■■□□ 2.3
Ttc9b-201ENSMUST00000008088 Adamts12Q811B3 1600 aa29.42■■■□□ 2.3
Ttc9b-201ENSMUST00000008088 TchhA0A0B4J1F9 1599 aa29.42■■■□□ 2.3
Ttc9b-201ENSMUST00000008088 Kdm5bQ80Y84 1544 aa29.42■■■□□ 2.3
Ttc9b-201ENSMUST00000008088 Gpatch8A2A6A1 1505 aa29.39■■■□□ 2.29
Ttc9b-201ENSMUST00000008088 Pbrm1Q8BSQ9 1634 aaKnown RBP29.38■■■□□ 2.29
Ttc9b-201ENSMUST00000008088 Nup160Q9Z0W3 1402 aaKnown RBP29.37■■■□□ 2.29
Ttc9b-201ENSMUST00000008088 PxdnQ3UQ28 1475 aa29.33■■■□□ 2.29
Ttc9b-201ENSMUST00000008088 3425401B19RikD3Z1D3 1412 aa29.3■■■□□ 2.28
Ttc9b-201ENSMUST00000008088 Abca16E9PWJ7 1678 aa29.29■■■□□ 2.28
Ttc9b-201ENSMUST00000008088 Soga1E1U8D0 1418 aa29.29■■■□□ 2.28
Ttc9b-201ENSMUST00000008088 Las1lA2BE28 776 aaKnown RBP29.29■■■□□ 2.28
Ttc9b-201ENSMUST00000008088 TonslQ6NZL6 1363 aa29.23■■■□□ 2.27
Ttc9b-201ENSMUST00000008088 Kif27Q7M6Z4 1394 aa29.22■■■□□ 2.27
Ttc9b-201ENSMUST00000008088 Eif4g3Q80XI3 1579 aaKnown RBP29.21■■■□□ 2.27
Ttc9b-201ENSMUST00000008088 Cc2d2bA0A286YDU8 1405 aa29.2■■■□□ 2.26
Ttc9b-201ENSMUST00000008088 Fam50aQ9WV03 339 aaKnown RBP29.18■■■□□ 2.26
Ttc9b-201ENSMUST00000008088 Lmtk2Q3TYD6 1471 aa29.13■■■□□ 2.25
Ttc9b-201ENSMUST00000008088 Rusc2Q80U22 1514 aa29.12■■■□□ 2.25
Ttc9b-201ENSMUST00000008088 Abcc2Q8VI47 1543 aa29.11■■■□□ 2.25
Ttc9b-201ENSMUST00000008088 Sall2Q9QX96 1004 aa29.11■■■□□ 2.25
Ttc9b-201ENSMUST00000008088 WrnO09053 1401 aa29.11■■■□□ 2.25
Ttc9b-201ENSMUST00000008088 Ccnb3Q810T2 1396 aa29.1■■■□□ 2.25
Ttc9b-201ENSMUST00000008088 BC005561E9Q5E2 1589 aa29.08■■■□□ 2.25
Ttc9b-201ENSMUST00000008088 Arhgap27A2AB59 869 aa29.06■■■□□ 2.24
Ttc9b-201ENSMUST00000008088 Eid3Q3V124 375 aa29.06■■■□□ 2.24
Ttc9b-201ENSMUST00000008088 Aebp2Q9Z248 504 aaKnown RBP29.06■■■□□ 2.24
Ttc9b-201ENSMUST00000008088 NexmifQ5DTT1 1515 aa29.06■■■□□ 2.24
Ttc9b-201ENSMUST00000008088 A2mQ6GQT1 1474 aa29.04■■■□□ 2.24
Ttc9b-201ENSMUST00000008088 Fhad1A6PWD2 1420 aa29.02■■■□□ 2.24
Ttc9b-201ENSMUST00000008088 Naip2Q9QUK4 1447 aa29.02■■■□□ 2.24
Ttc9b-201ENSMUST00000008088 Shroom2A2ALU4 1481 aa29.01■■■□□ 2.23
Ttc9b-201ENSMUST00000008088 Gcc2Q8CHG3 1679 aa29■■■□□ 2.23
Ttc9b-201ENSMUST00000008088 Wdr66E9Q743 1299 aa29■■■□□ 2.23
Ttc9b-201ENSMUST00000008088 Mia2Q91ZV0 1396 aa29■■■□□ 2.23
Ttc9b-201ENSMUST00000008088 Rapgef6Q5NCJ1 1609 aa28.98■■■□□ 2.23
Ttc9b-201ENSMUST00000008088 Vps8Q0P5W1 1427 aa28.96■■■□□ 2.23
Ttc9b-201ENSMUST00000008088 Mug1P28665 1476 aa28.92■■■□□ 2.22
Ttc9b-201ENSMUST00000008088 Ncoa3O09000 1398 aa28.9■■■□□ 2.22
Ttc9b-201ENSMUST00000008088 Map3k4O08648 1597 aa28.87■■■□□ 2.21
Ttc9b-201ENSMUST00000008088 Arhgef11Q68FM7 1552 aa28.86■■■□□ 2.21
Ttc9b-201ENSMUST00000008088 Chic2Q9D9G3 165 aa28.82■■■□□ 2.2
Ttc9b-201ENSMUST00000008088 ClspnQ80YR7 1315 aa28.81■■■□□ 2.2
Ttc9b-201ENSMUST00000008088 Arhgap31A6X8Z5 1425 aa28.8■■■□□ 2.2
Ttc9b-201ENSMUST00000008088 Dnmt1P13864 1620 aaKnown RBP28.79■■■□□ 2.2
Ttc9b-201ENSMUST00000008088 Dennd4bQ3U1Y4 1499 aa28.78■■■□□ 2.2
Ttc9b-201ENSMUST00000008088 Ccer2J3QPU5 274 aa28.78■■■□□ 2.2
Ttc9b-201ENSMUST00000008088 Zcchc11B2RX14 1644 aaKnown RBP28.76■■■□□ 2.2
Ttc9b-201ENSMUST00000008088 Cdc42bpaQ3UU96 1719 aa28.76■■■□□ 2.19
Ttc9b-201ENSMUST00000008088 UacaQ8CGB3 1411 aa28.76■■■□□ 2.19
Ttc9b-201ENSMUST00000008088 Fgd6Q69ZL1 1399 aa28.75■■■□□ 2.19
Ttc9b-201ENSMUST00000008088 Ankrd36D3Z4K0 1415 aa28.74■■■□□ 2.19
Ttc9b-201ENSMUST00000008088 Kiaa1551Q5DTW7 1521 aa28.73■■■□□ 2.19
Ttc9b-201ENSMUST00000008088 Ccdc141E9Q8Q6 1531 aa28.72■■■□□ 2.19
Ttc9b-201ENSMUST00000008088 Neo1P97798 1493 aa28.72■■■□□ 2.19
Ttc9b-201ENSMUST00000008088 Arhgef40Q3UPH7 1517 aa28.72■■■□□ 2.19
Ttc9b-201ENSMUST00000008088 Ncoa2Q61026 1462 aa28.71■■■□□ 2.19
Ttc9b-201ENSMUST00000008088 Mroh2aD3Z750 1679 aa28.69■■■□□ 2.18
Ttc9b-201ENSMUST00000008088 Ppargc1bQ8VHJ7 1014 aa28.68■■■□□ 2.18
Ttc9b-201ENSMUST00000008088 Magi1Q6RHR9 1471 aa28.67■■■□□ 2.18
Ttc9b-201ENSMUST00000008088 Kdm6bQ5NCY0 1641 aa28.66■■■□□ 2.18
Ttc9b-201ENSMUST00000008088 Adcy10Q8C0T9 1614 aa28.66■■■□□ 2.18
Ttc9b-201ENSMUST00000008088 Abcc5Q9R1X5 1436 aa28.65■■■□□ 2.18
Ttc9b-201ENSMUST00000008088 AknaQ80VW7 1404 aa28.65■■■□□ 2.18
Ttc9b-201ENSMUST00000008088 Rfx7F8VPJ6 1459 aa28.63■■■□□ 2.17
Ttc9b-201ENSMUST00000008088 Plekhh2Q8C115 1491 aa28.63■■■□□ 2.17
Ttc9b-201ENSMUST00000008088 Ube2uB1AUC4 352 aa28.62■■■□□ 2.17
Ttc9b-201ENSMUST00000008088 Arhgef12Q8R4H2 1543 aaKnown RBP28.62■■■□□ 2.17
Retrieved 100 of 22,080 RNA–protein pairs in 11.7 ms