RNA–Protein interactions for RNA: ENSMUST00000004428.13

Clcn5-201, Transcript of H(+)/Cl(-) exchange transporter 5, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clcn5, Length 8,390 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5-201ENSMUST00000004428 Il27Q8K3I6 234 aa8.57□□□□□ -1.04
Clcn5-201ENSMUST00000004428 Pde3bQ61409 1100 aa8.57□□□□□ -1.04
Clcn5-201ENSMUST00000004428 Fam50aQ9WV03 339 aaKnown RBP8.57□□□□□ -1.04
Clcn5-201ENSMUST00000004428 Wdr43Q6ZQL4 677 aaKnown RBP8.55□□□□□ -1.04
Clcn5-201ENSMUST00000004428 Ccdc18Q640L5 1455 aa8.55□□□□□ -1.04
Clcn5-201ENSMUST00000004428 Mterf4Q8BVN4 346 aa8.54□□□□□ -1.04
Clcn5-201ENSMUST00000004428 Baz1bQ9Z277 1479 aa8.54□□□□□ -1.04
Clcn5-201ENSMUST00000004428 Bcl11aQ9QYE3 773 aa8.54□□□□□ -1.04
Clcn5-201ENSMUST00000004428 Ccdc27Q3V036 639 aa8.54□□□□□ -1.04
Clcn5-201ENSMUST00000004428 Fkbp15Q6P9Q6 1216 aaKnown RBP8.54□□□□□ -1.04
Clcn5-201ENSMUST00000004428 Atad2bE9Q166 1460 aaKnown RBP8.54□□□□□ -1.04
Clcn5-201ENSMUST00000004428 AU015836B2RUM3 263 aa8.53□□□□□ -1.04
Clcn5-201ENSMUST00000004428 Hsp90b1P08113 802 aaKnown RBP8.52□□□□□ -1.05
Clcn5-201ENSMUST00000004428 Ppm1gQ61074 542 aa8.52□□□□□ -1.05
Clcn5-201ENSMUST00000004428 AampJ3QN89 436 aa8.51□□□□□ -1.05
Clcn5-201ENSMUST00000004428 Ppm1eQ80TL0 749 aa8.5□□□□□ -1.05
Clcn5-201ENSMUST00000004428 Ubl4bQ9CQ84 188 aa8.5□□□□□ -1.05
Clcn5-201ENSMUST00000004428 Smarca4Q3TKT4 1613 aaKnown RBP8.49□□□□□ -1.05
Clcn5-201ENSMUST00000004428 1700123L14RikQ3V2K7 440 aa8.48□□□□□ -1.05
Clcn5-201ENSMUST00000004428 Glipr1l2Q9CQ35 332 aa8.47□□□□□ -1.05
Clcn5-201ENSMUST00000004428 Pknox2Q8BG99 474 aa8.46□□□□□ -1.05
Clcn5-201ENSMUST00000004428 Cttnbp2B9EJA2 1648 aa8.46□□□□□ -1.05
Clcn5-201ENSMUST00000004428 Dhx8A2A4P0 1244 aaKnown RBP8.46□□□□□ -1.05
Clcn5-201ENSMUST00000004428 Erich6D3Z6S9 713 aa8.45□□□□□ -1.06
Clcn5-201ENSMUST00000004428 Clstn2Q9ER65 966 aa8.45□□□□□ -1.06
Clcn5-201ENSMUST00000004428 Map7O88735 730 aa8.45□□□□□ -1.06
Clcn5-201ENSMUST00000004428 Fmn1Q05860 1466 aa8.45□□□□□ -1.06
Clcn5-201ENSMUST00000004428 Q8BT18 775 aa8.43□□□□□ -1.06
Clcn5-201ENSMUST00000004428 Zbtb7cQ8VCZ7 619 aa8.43□□□□□ -1.06
Clcn5-201ENSMUST00000004428 Ddrgk1Q80WW9 315 aa8.42□□□□□ -1.06
Clcn5-201ENSMUST00000004428 Kif15Q6P9L6 1387 aa8.42□□□□□ -1.06
Clcn5-201ENSMUST00000004428 Gm38655A0A286YDK6 273 aa8.41□□□□□ -1.06
Clcn5-201ENSMUST00000004428 Fam193aQ8CGI1 1231 aaKnown RBP8.41□□□□□ -1.06
Clcn5-201ENSMUST00000004428 Dnai2A2AC93 623 aa8.41□□□□□ -1.06
Clcn5-201ENSMUST00000004428 Irx3P81067 507 aa8.41□□□□□ -1.06
Clcn5-201ENSMUST00000004428 Rsph6aQ8CDR2 708 aa8.41□□□□□ -1.06
Clcn5-201ENSMUST00000004428 Mier1Q5UAK0 511 aa8.41□□□□□ -1.06
Clcn5-201ENSMUST00000004428 CftrP26361 1476 aa8.41□□□□□ -1.06
Clcn5-201ENSMUST00000004428 Os9Q8K2C7 672 aa8.4□□□□□ -1.06
Clcn5-201ENSMUST00000004428 Phldb1Q6PDH0 1371 aaKnown RBP8.4□□□□□ -1.06
Clcn5-201ENSMUST00000004428 Znf326O88291 580 aa8.39□□□□□ -1.07
Clcn5-201ENSMUST00000004428 MsnP26041 577 aaKnown RBP8.38□□□□□ -1.07
Clcn5-201ENSMUST00000004428 Zrsr2Q62377 462 aaKnown RBP8.38□□□□□ -1.07
Clcn5-201ENSMUST00000004428 Cald1E9QA15 768 aaKnown RBP8.38□□□□□ -1.07
Clcn5-201ENSMUST00000004428 Ppargc1bQ8VHJ7 1014 aa8.38□□□□□ -1.07
Clcn5-201ENSMUST00000004428 Sall2Q9QX96 1004 aa8.38□□□□□ -1.07
Clcn5-201ENSMUST00000004428 RdxP26043 583 aaKnown RBP8.37□□□□□ -1.07
Clcn5-201ENSMUST00000004428 Rrp12Q6P5B0 1295 aaKnown RBP8.37□□□□□ -1.07
Clcn5-201ENSMUST00000004428 Mak16Q8BGS0 296 aaKnown RBP8.37□□□□□ -1.07
Clcn5-201ENSMUST00000004428 Chmp4cQ9D7F7 232 aa8.36□□□□□ -1.07
Clcn5-201ENSMUST00000004428 Chaf1aQ9QWF0 911 aa8.36□□□□□ -1.07
Clcn5-201ENSMUST00000004428 PnnO35691 725 aaKnown RBP8.36□□□□□ -1.07
Clcn5-201ENSMUST00000004428 Nlrp6Q91WS2 869 aa8.36□□□□□ -1.07
Clcn5-201ENSMUST00000004428 Cspp1B2RX88 1205 aa8.35□□□□□ -1.07
Clcn5-201ENSMUST00000004428 Clip1Q922J3 1391 aa8.33□□□□□ -1.08
Clcn5-201ENSMUST00000004428 Hap1O35668 628 aa8.33□□□□□ -1.08
Clcn5-201ENSMUST00000004428 Eif4g2Q62448 906 aaKnown RBP8.32□□□□□ -1.08
Clcn5-201ENSMUST00000004428 Znf316Q6PGE4 1016 aa8.32□□□□□ -1.08
Clcn5-201ENSMUST00000004428 Fam71e1A1L3C1 212 aa8.32□□□□□ -1.08
Clcn5-201ENSMUST00000004428 PrkcshO08795 521 aa8.32□□□□□ -1.08
Clcn5-201ENSMUST00000004428 Casc1Q6TDU8 730 aa8.32□□□□□ -1.08
Clcn5-201ENSMUST00000004428 MccE9PWI3 1003 aa8.32□□□□□ -1.08
Clcn5-201ENSMUST00000004428 Wwc2Q6NXJ0 1187 aa8.31□□□□□ -1.08
Clcn5-201ENSMUST00000004428 Iqgap2Q3UQ44 1575 aa8.31□□□□□ -1.08
Clcn5-201ENSMUST00000004428 Sycp1Q62209 993 aa8.31□□□□□ -1.08
Clcn5-201ENSMUST00000004428 Ccdc34Q3UI66 367 aa8.31□□□□□ -1.08
Clcn5-201ENSMUST00000004428 KnstrnQ9D9Z1 312 aaKnown RBP8.31□□□□□ -1.08
Clcn5-201ENSMUST00000004428 Kif3cO35066 796 aa8.3□□□□□ -1.08
Clcn5-201ENSMUST00000004428 Cwc15Q9JHS9 229 aaKnown RBP8.3□□□□□ -1.08
Clcn5-201ENSMUST00000004428 PtmaP26350 111 aa8.3□□□□□ -1.08
Clcn5-201ENSMUST00000004428 Cwc22Q8C5N3 908 aaKnown RBP8.3□□□□□ -1.08
Clcn5-201ENSMUST00000004428 Isy1Q69ZQ2 285 aaKnown RBP8.29□□□□□ -1.08
Clcn5-201ENSMUST00000004428 Eea1Q8BL66 1411 aa8.29□□□□□ -1.08
Clcn5-201ENSMUST00000004428 A0A1L1SQF0 893 aa8.29□□□□□ -1.08
Clcn5-201ENSMUST00000004428 Atp6v1dP57746 247 aa8.29□□□□□ -1.08
Clcn5-201ENSMUST00000004428 Smarce1O54941 411 aaKnown RBP8.28□□□□□ -1.08
Clcn5-201ENSMUST00000004428 BccipQ9CWI3 316 aa8.28□□□□□ -1.08
Clcn5-201ENSMUST00000004428 ArxO35085 564 aa8.27□□□□□ -1.08
Clcn5-201ENSMUST00000004428 Tpm3-rs7D3Z2H9 248 aa8.27□□□□□ -1.09
Clcn5-201ENSMUST00000004428 R3hcc1Q8BSI6 488 aa8.27□□□□□ -1.09
Clcn5-201ENSMUST00000004428 HnrnpuQ8VEK3 800 aaKnown RBP8.27□□□□□ -1.09
Clcn5-201ENSMUST00000004428 Plppr3Q7TPB0 716 aa8.27□□□□□ -1.09
Clcn5-201ENSMUST00000004428 Dctn1O08788 1281 aa8.26□□□□□ -1.09
Clcn5-201ENSMUST00000004428 Mapk8ip3Q9ESN9 1337 aa8.26□□□□□ -1.09
Clcn5-201ENSMUST00000004428 Tpm3P21107 285 aaKnown RBP8.26□□□□□ -1.09
Clcn5-201ENSMUST00000004428 Synj1Q8CHC4 1574 aa8.25□□□□□ -1.09
Clcn5-201ENSMUST00000004428 Gtf3c3Q3TMP1 882 aa8.25□□□□□ -1.09
Clcn5-201ENSMUST00000004428 Ap3b1Q9Z1T1 1105 aa8.25□□□□□ -1.09
Clcn5-201ENSMUST00000004428 Ak7Q9D2H2 614 aa8.25□□□□□ -1.09
Clcn5-201ENSMUST00000004428 Becn1O88597 448 aa8.24□□□□□ -1.09
Clcn5-201ENSMUST00000004428 Ppp4r2Q0VGB7 417 aa8.24□□□□□ -1.09
Clcn5-201ENSMUST00000004428 NudcO35685 332 aaKnown RBP8.24□□□□□ -1.09
Clcn5-201ENSMUST00000004428 Rpap1Q80TE0 1409 aa8.24□□□□□ -1.09
Clcn5-201ENSMUST00000004428 Polr3gQ6NXY9 223 aa8.24□□□□□ -1.09
Clcn5-201ENSMUST00000004428 Setd5Q5XJV7 1441 aa8.23□□□□□ -1.09
Clcn5-201ENSMUST00000004428 Pes1Q9EQ61 584 aaKnown RBP8.23□□□□□ -1.09
Clcn5-201ENSMUST00000004428 ItpripQ3TNL8 555 aa8.22□□□□□ -1.09
Clcn5-201ENSMUST00000004428 Iqcf3Q9D498 203 aa8.22□□□□□ -1.09
Clcn5-201ENSMUST00000004428 Trap1aP19473 224 aa8.22□□□□□ -1.09
Clcn5-201ENSMUST00000004428 Chic1Q8CBW7 227 aa8.22□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms