RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 COL24A1Q17RW2 1714 aa1.46□□□□□ -2.18
HMGB1P24-202ENST00000615653 CDK13Q14004 1512 aaKnown RBP1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 KIF1AQ12756 1690 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 LRP5O75197 1615 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 MROH1Q8NDA8 1641 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 IGLV3-32A0A0A0MS00 114 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 TRBV6-8A0A0A6YYG3 113 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 TEX49A0A1B0GTD5 131 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 A0A1B0GWA3 101 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 LRCOL1A6NCL2 159 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 NUPR2A6NF83 97 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 IGLV6-57P01721 117 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 IGHV3-30P01768 117 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 TFF1P04155 84 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 HMGN2P05204 90 aaKnown RBP1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 SAA2P0DJI9 122 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 IGHV3-30-5P0DP03 117 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 FAM74A4Q5TZK3 123 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 C6orf201Q7Z4U5 140 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 Q86TA4 180 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 AMELXQ99217 191 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 KLK9Q9UKQ9 250 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 LENEPQ9Y5L5 61 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 DIP2BQ9P265 1576 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 SHANK3Q9BYB0 1731 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 COL27A1Q8IZC6 1860 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 CPAMD8Q8IZJ3 1885 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 MALRD1Q5VYJ5 2156 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 EFCAB5A4FU69 1503 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 SLIT3O75094 1523 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 LRRC7Q96NW7 1537 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 KIAA1549LQ6ZVL6 1849 aa1.45□□□□□ -2.18
HMGB1P24-202ENST00000615653 TOP2BQ02880 1626 aa1.44□□□□□ -2.18
HMGB1P24-202ENST00000615653 TARBP1Q13395 1621 aaKnown RBP1.44□□□□□ -2.18
HMGB1P24-202ENST00000615653 LRRC9Q6ZRR7 1453 aa1.44□□□□□ -2.18
HMGB1P24-202ENST00000615653 CCDC88CQ9P219 2028 aa1.44□□□□□ -2.18
HMGB1P24-202ENST00000615653 MYO5CQ9NQX4 1742 aa1.44□□□□□ -2.18
HMGB1P24-202ENST00000615653 NWD2Q9ULI1 1742 aa1.44□□□□□ -2.18
HMGB1P24-202ENST00000615653 IQGAP2Q13576 1575 aa1.44□□□□□ -2.18
HMGB1P24-202ENST00000615653 SETBP1Q9Y6X0 1596 aa1.44□□□□□ -2.18
HMGB1P24-202ENST00000615653 CEBPZOSA8MTT3 80 aa1.44□□□□□ -2.18
HMGB1P24-202ENST00000615653 P0C880 135 aa1.44□□□□□ -2.18
HMGB1P24-202ENST00000615653 SPAG11BQ08648 103 aa1.44□□□□□ -2.18
HMGB1P24-202ENST00000615653 SPAG11AQ6PDA7 123 aa1.44□□□□□ -2.18
HMGB1P24-202ENST00000615653 PATE1Q8WXA2 126 aa1.44□□□□□ -2.18
HMGB1P24-202ENST00000615653 CDC42SE2Q9NRR3 84 aa1.44□□□□□ -2.18
HMGB1P24-202ENST00000615653 TMEM14BQ9NUH8 114 aa1.44□□□□□ -2.18
HMGB1P24-202ENST00000615653 R4GMQ9 66 aa1.44□□□□□ -2.18
HMGB1P24-202ENST00000615653 COL11A1P12107 1806 aaPredicted RBP1.44□□□□□ -2.18
HMGB1P24-202ENST00000615653 LAMB4A4D0S4 1761 aa1.44□□□□□ -2.18
HMGB1P24-202ENST00000615653 LTN1O94822 1766 aa1.44□□□□□ -2.18
HMGB1P24-202ENST00000615653 LAMB1P07942 1786 aa1.44□□□□□ -2.18
HMGB1P24-202ENST00000615653 ABCA9Q8IUA7 1624 aa1.44□□□□□ -2.18
HMGB1P24-202ENST00000615653 PTPRMP28827 1452 aa1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 PRXQ9BXM0 1461 aa1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 ITSN1Q15811 1721 aa1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 KIAA1549Q9HCM3 1950 aa1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 ABCA8O94911 1581 aa1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 MYO18AQ92614 2054 aaKnown RBP1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 TRBV6-7A0A0A0MS04 114 aa1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 MYMXA0A1B0GTQ4 84 aa1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 TRBV6-4A0A1B0GX49 114 aa1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 JMJD7-PLA2G4BH0Y9G9 81 aa1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 HMGN4O00479 90 aa1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 LEPROTL1O95214 131 aa1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 PPP1R17O96001 155 aa1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 PPYP01298 95 aa1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 SFTA3P0C7M3 94 aa1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 PLGLAQ15195 96 aa1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 Q5VV11 94 aa1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 SFTA2Q6UW10 78 aa1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 FAM223AQ8IWN6 122 aa1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 C20orf197Q8N268 126 aa1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 CUX1P39880 1505 aa1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 EHBP1L1Q8N3D4 1523 aa1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 LAMB2P55268 1798 aa1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 MYO3AQ8NEV4 1616 aa1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 KNDC1Q76NI1 1749 aa1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 NKTRP30414 1462 aaKnown RBP1.43□□□□□ -2.18
HMGB1P24-202ENST00000615653 MUC4Q99102 2169 aa1.42□□□□□ -2.18
HMGB1P24-202ENST00000615653 STRCQ7RTU9 1775 aa1.42□□□□□ -2.18
HMGB1P24-202ENST00000615653 SLIT2O94813 1529 aa1.42□□□□□ -2.18
HMGB1P24-202ENST00000615653 HMGXB3Q12766 1538 aa1.42□□□□□ -2.18
HMGB1P24-202ENST00000615653 EFCAB6Q5THR3 1501 aa1.42□□□□□ -2.18
HMGB1P24-202ENST00000615653 TRPM7Q96QT4 1865 aa1.42□□□□□ -2.18
HMGB1P24-202ENST00000615653 PLXNA1Q9UIW2 1896 aa1.42□□□□□ -2.18
HMGB1P24-202ENST00000615653 KIF21BO75037 1637 aa1.42□□□□□ -2.18
HMGB1P24-202ENST00000615653 PREX2Q70Z35 1606 aa1.42□□□□□ -2.18
HMGB1P24-202ENST00000615653 RNF17Q9BXT8 1623 aaKnown RBP1.42□□□□□ -2.18
HMGB1P24-202ENST00000615653 A0A0G2JQZ4 141 aa1.42□□□□□ -2.18
HMGB1P24-202ENST00000615653 LOC101927531A0A1B0GV80 90 aa1.42□□□□□ -2.18
HMGB1P24-202ENST00000615653 IQCF6A8MYZ5 107 aa1.42□□□□□ -2.18
HMGB1P24-202ENST00000615653 F8WEM9 126 aa1.42□□□□□ -2.18
HMGB1P24-202ENST00000615653 PDE6GP18545 87 aa1.42□□□□□ -2.18
HMGB1P24-202ENST00000615653 EFNA4P52798 201 aa1.42□□□□□ -2.18
HMGB1P24-202ENST00000615653 COX7B2Q8TF08 81 aa1.42□□□□□ -2.18
HMGB1P24-202ENST00000615653 BPESC1Q9GZL8 116 aa1.42□□□□□ -2.18
HMGB1P24-202ENST00000615653 CYSTM1Q9H1C7 97 aa1.42□□□□□ -2.18
HMGB1P24-202ENST00000615653 WFDC10AQ9H1F0 79 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms