RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 CD7P09564 240 aa12.36□□□□□ -0.43
PCDHGA11-202ENST00000518882 RPL32P62910 135 aaKnown RBP12.36□□□□□ -0.43
PCDHGA11-202ENST00000518882 SRSF9Q13242 221 aaKnown RBP eCLIP12.36□□□□□ -0.43
PCDHGA11-202ENST00000518882 SPG11Q96JI7 2443 aa12.36□□□□□ -0.43
PCDHGA11-202ENST00000518882 TSPEAR-AS2P59090 65 aa12.36□□□□□ -0.43
PCDHGA11-202ENST00000518882 TSPAN13O95857 204 aa12.35□□□□□ -0.43
PCDHGA11-202ENST00000518882 SMAGPQ0VAQ4 97 aa12.35□□□□□ -0.43
PCDHGA11-202ENST00000518882 PMVKQ15126 192 aa12.35□□□□□ -0.43
PCDHGA11-202ENST00000518882 SIGMAR1Q99720 223 aa12.35□□□□□ -0.43
PCDHGA11-202ENST00000518882 A0A0J9YY99 117 aa12.35□□□□□ -0.43
PCDHGA11-202ENST00000518882 SDHAF1A6NFY7 115 aa12.35□□□□□ -0.43
PCDHGA11-202ENST00000518882 F5H697 171 aa12.35□□□□□ -0.43
PCDHGA11-202ENST00000518882 TMEM95Q3KNT9 176 aa12.35□□□□□ -0.43
PCDHGA11-202ENST00000518882 TMEM238LA0A1B0GVL6 79 aa12.34□□□□□ -0.43
PCDHGA11-202ENST00000518882 A6NJY4 79 aa12.34□□□□□ -0.43
PCDHGA11-202ENST00000518882 SMCPP49901 116 aaPredicted RBP12.34□□□□□ -0.43
PCDHGA11-202ENST00000518882 ZNRF2Q8NHG8 242 aa12.34□□□□□ -0.43
PCDHGA11-202ENST00000518882 CSPG4Q6UVK1 2322 aa12.34□□□□□ -0.43
PCDHGA11-202ENST00000518882 J3QR89 54 aa12.34□□□□□ -0.43
PCDHGA11-202ENST00000518882 VCYO14598 125 aa12.34□□□□□ -0.43
PCDHGA11-202ENST00000518882 CFHR3Q02985 330 aa12.34□□□□□ -0.43
PCDHGA11-202ENST00000518882 FAM74A4Q5TZK3 123 aa12.34□□□□□ -0.43
PCDHGA11-202ENST00000518882 CLEC2AQ6UVW9 174 aa12.34□□□□□ -0.43
PCDHGA11-202ENST00000518882 KIR2DL4Q99706 377 aa12.34□□□□□ -0.43
PCDHGA11-202ENST00000518882 SPATA25Q9BR10 227 aa12.34□□□□□ -0.43
PCDHGA11-202ENST00000518882 PIMREGQ9BSJ6 248 aa12.34□□□□□ -0.43
PCDHGA11-202ENST00000518882 APOMO95445 188 aa12.33□□□□□ -0.44
PCDHGA11-202ENST00000518882 CFAP126Q5VTH2 177 aa12.33□□□□□ -0.44
PCDHGA11-202ENST00000518882 SORL1Q92673 2214 aa12.33□□□□□ -0.44
PCDHGA11-202ENST00000518882 CSMD2Q7Z408 3487 aa12.33□□□□□ -0.44
PCDHGA11-202ENST00000518882 MDFICQ9P1T7 246 aa12.32□□□□□ -0.44
PCDHGA11-202ENST00000518882 TRAV12-2A0A075B6T6 113 aa12.32□□□□□ -0.44
PCDHGA11-202ENST00000518882 TRBV27A0A0K0K1C4 114 aa12.32□□□□□ -0.44
PCDHGA11-202ENST00000518882 IGKV3-20P01619 116 aa12.32□□□□□ -0.44
PCDHGA11-202ENST00000518882 GNLYP22749 145 aa12.32□□□□□ -0.44
PCDHGA11-202ENST00000518882 C10orf105Q8TEF2 133 aa12.32□□□□□ -0.44
PCDHGA11-202ENST00000518882 TMEM141Q96I45 108 aa12.32□□□□□ -0.44
PCDHGA11-202ENST00000518882 TIMM17AQ99595 171 aa12.32□□□□□ -0.44
PCDHGA11-202ENST00000518882 LOC107984156A0A0G2JMH3 177 aa12.31□□□□□ -0.44
PCDHGA11-202ENST00000518882 LGALS9O00182 355 aa12.31□□□□□ -0.44
PCDHGA11-202ENST00000518882 HERVK_113P61574 105 aa12.31□□□□□ -0.44
PCDHGA11-202ENST00000518882 PAPPA-AS1Q5QFB9 102 aa12.31□□□□□ -0.44
PCDHGA11-202ENST00000518882 TMEM170BQ5T4T1 132 aa12.31□□□□□ -0.44
PCDHGA11-202ENST00000518882 ARL17AQ8IVW1 177 aa12.31□□□□□ -0.44
PCDHGA11-202ENST00000518882 DLX4Q92988 240 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA11-202ENST00000518882 ZNF256Q9Y2P7 627 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA11-202ENST00000518882 IGHV3-16A0A0C4DH30 117 aa12.31□□□□□ -0.44
PCDHGA11-202ENST00000518882 ZNF688P0C7X2 276 aa12.31□□□□□ -0.44
PCDHGA11-202ENST00000518882 ID1P41134 155 aa12.31□□□□□ -0.44
PCDHGA11-202ENST00000518882 ZNF876PQ49A33 203 aa12.31□□□□□ -0.44
PCDHGA11-202ENST00000518882 NDUFA11Q86Y39 141 aa12.31□□□□□ -0.44
PCDHGA11-202ENST00000518882 AMELXQ99217 191 aa12.31□□□□□ -0.44
PCDHGA11-202ENST00000518882 OPRPNQ99935 248 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA11-202ENST00000518882 K7EMT4 169 aa12.3□□□□□ -0.44
PCDHGA11-202ENST00000518882 AVPP01185 164 aa12.3□□□□□ -0.44
PCDHGA11-202ENST00000518882 PSMB2P49721 201 aa12.3□□□□□ -0.44
PCDHGA11-202ENST00000518882 UBE2D3P61077 147 aa12.3□□□□□ -0.44
PCDHGA11-202ENST00000518882 UBE2D2P62837 147 aa12.3□□□□□ -0.44
PCDHGA11-202ENST00000518882 C10orf99Q6UWK7 81 aa12.3□□□□□ -0.44
PCDHGA11-202ENST00000518882 C9orf85Q96MD7 179 aa12.3□□□□□ -0.44
PCDHGA11-202ENST00000518882 IGHV4-30-2A0A087WSY4 118 aa12.3□□□□□ -0.44
PCDHGA11-202ENST00000518882 NDUFS8O00217 210 aa12.3□□□□□ -0.44
PCDHGA11-202ENST00000518882 TRBV6-5A0A0K0K1A5 114 aa12.29□□□□□ -0.44
PCDHGA11-202ENST00000518882 IGHV3-30P01768 117 aa12.29□□□□□ -0.44
PCDHGA11-202ENST00000518882 IGHV3-30-5P0DP03 117 aa12.29□□□□□ -0.44
PCDHGA11-202ENST00000518882 M0QY20 66 aa12.28□□□□□ -0.44
PCDHGA11-202ENST00000518882 CFC1BP0CG36 223 aa12.28□□□□□ -0.44
PCDHGA11-202ENST00000518882 CFC1P0CG37 223 aa12.28□□□□□ -0.44
PCDHGA11-202ENST00000518882 NFE4Q86UQ8 179 aa12.28□□□□□ -0.44
PCDHGA11-202ENST00000518882 Q8N1Y9 231 aa12.28□□□□□ -0.44
PCDHGA11-202ENST00000518882 CCL19Q99731 98 aa12.28□□□□□ -0.44
PCDHGA11-202ENST00000518882 SCGB1A1P11684 91 aa12.28□□□□□ -0.44
PCDHGA11-202ENST00000518882 FOXI1Q12951 378 aa12.28□□□□□ -0.44
PCDHGA11-202ENST00000518882 ZNF56Q15929 161 aa12.28□□□□□ -0.44
PCDHGA11-202ENST00000518882 SLC25A29Q8N8R3 303 aa12.28□□□□□ -0.44
PCDHGA11-202ENST00000518882 C1QTNF4Q9BXJ3 329 aa12.28□□□□□ -0.44
PCDHGA11-202ENST00000518882 DOPEY2Q9Y3R5 2298 aa12.28□□□□□ -0.44
PCDHGA11-202ENST00000518882 MSMBP08118 114 aa12.27□□□□□ -0.45
PCDHGA11-202ENST00000518882 P0DMU3 169 aa12.27□□□□□ -0.45
PCDHGA11-202ENST00000518882 FAM231AP0DMU4 169 aa12.27□□□□□ -0.45
PCDHGA11-202ENST00000518882 FAM231CP0DMU5 169 aa12.27□□□□□ -0.45
PCDHGA11-202ENST00000518882 PSMB8P28062 276 aa12.27□□□□□ -0.45
PCDHGA11-202ENST00000518882 ZNF418Q8TF45 676 aaPredicted RBP12.27□□□□□ -0.45
PCDHGA11-202ENST00000518882 PTH2Q96A98 100 aa12.27□□□□□ -0.45
PCDHGA11-202ENST00000518882 A0A0J9YX75 114 aa12.26□□□□□ -0.45
PCDHGA11-202ENST00000518882 J3QQQ9 107 aa12.26□□□□□ -0.45
PCDHGA11-202ENST00000518882 FLNCQ14315 2725 aa12.26□□□□□ -0.45
PCDHGA11-202ENST00000518882 UTP20O75691 2785 aaKnown RBP12.26□□□□□ -0.45
PCDHGA11-202ENST00000518882 TCL1BO95988 128 aa12.26□□□□□ -0.45
PCDHGA11-202ENST00000518882 SPINK13Q1W4C9 94 aa12.26□□□□□ -0.45
PCDHGA11-202ENST00000518882 CFAP46Q8IYW2 2715 aa12.26□□□□□ -0.45
PCDHGA11-202ENST00000518882 NSUN5P1Q3KNT7 163 aa12.25□□□□□ -0.45
PCDHGA11-202ENST00000518882 ATP6V0E2Q8NHE4 81 aa12.25□□□□□ -0.45
PCDHGA11-202ENST00000518882 ATP5J2P56134 94 aa12.24□□□□□ -0.45
PCDHGA11-202ENST00000518882 ODF3Q96PU9 254 aa12.24□□□□□ -0.45
PCDHGA11-202ENST00000518882 EIF4EBP3O60516 100 aaPredicted RBP12.23□□□□□ -0.45
PCDHGA11-202ENST00000518882 FHL3Q13643 280 aa12.23□□□□□ -0.45
PCDHGA11-202ENST00000518882 SYT8Q8NBV8 401 aa12.23□□□□□ -0.45
PCDHGA11-202ENST00000518882 ZANQ9Y493 2812 aa12.23□□□□□ -0.45
PCDHGA11-202ENST00000518882 IGHV3-64A0A075B6Q5 118 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms