RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 APOC1P02654 83 aa-0.05□□□□□ -2.42
PFDN4-202ENST00000441080 SMIM6P0DI80 62 aa-0.05□□□□□ -2.42
PFDN4-202ENST00000441080 S100A5P33763 92 aa-0.05□□□□□ -2.42
PFDN4-202ENST00000441080 S100A3P33764 101 aa-0.05□□□□□ -2.42
PFDN4-202ENST00000441080 HAMPP81172 84 aa-0.05□□□□□ -2.42
PFDN4-202ENST00000441080 HEPN1Q6WQI6 88 aa-0.05□□□□□ -2.42
PFDN4-202ENST00000441080 WFDC9Q8NEX5 89 aa-0.05□□□□□ -2.42
PFDN4-202ENST00000441080 FDCSPQ8NFU4 85 aa-0.05□□□□□ -2.42
PFDN4-202ENST00000441080 VSTM2AQ8TAG5 236 aa-0.05□□□□□ -2.42
PFDN4-202ENST00000441080 TENM4Q6N022 2769 aa-0.05□□□□□ -2.42
PFDN4-202ENST00000441080 COL7A1Q02388 2944 aa-0.06□□□□□ -2.42
PFDN4-202ENST00000441080 CREBBPQ92793 2442 aa-0.06□□□□□ -2.42
PFDN4-202ENST00000441080 TEX49A0A1B0GTD5 131 aa-0.06□□□□□ -2.42
PFDN4-202ENST00000441080 SPINK4O60575 86 aa-0.06□□□□□ -2.42
PFDN4-202ENST00000441080 YPEL1O60688 119 aa-0.06□□□□□ -2.42
PFDN4-202ENST00000441080 NMBP08949 121 aa-0.06□□□□□ -2.42
PFDN4-202ENST00000441080 GCHFRP30047 84 aa-0.06□□□□□ -2.42
PFDN4-202ENST00000441080 DCDP81605 110 aaKnown RBP-0.06□□□□□ -2.42
PFDN4-202ENST00000441080 DEFB135Q30KP9 77 aa-0.06□□□□□ -2.42
PFDN4-202ENST00000441080 H1FX-AS1Q4G0G2 97 aa-0.06□□□□□ -2.42
PFDN4-202ENST00000441080 HSD17B12Q53GQ0 312 aa-0.06□□□□□ -2.42
PFDN4-202ENST00000441080 UBE2DNLQ8IWF7 75 aa-0.06□□□□□ -2.42
PFDN4-202ENST00000441080 AMELXQ99217 191 aa-0.06□□□□□ -2.42
PFDN4-202ENST00000441080 SDF2Q99470 211 aa-0.06□□□□□ -2.42
PFDN4-202ENST00000441080 DDA1Q9BW61 102 aa-0.06□□□□□ -2.42
PFDN4-202ENST00000441080 COA4Q9NYJ1 87 aa-0.06□□□□□ -2.42
PFDN4-202ENST00000441080 APLNQ9ULZ1 77 aa-0.06□□□□□ -2.42
PFDN4-202ENST00000441080 IGF2RP11717 2491 aa-0.06□□□□□ -2.42
PFDN4-202ENST00000441080 ANKRD50Q9ULJ7 1429 aa-0.06□□□□□ -2.42
PFDN4-202ENST00000441080 LAMC1P11047 1609 aa-0.06□□□□□ -2.42
PFDN4-202ENST00000441080 KNDC1Q76NI1 1749 aa-0.07□□□□□ -2.42
PFDN4-202ENST00000441080 DMBT1Q9UGM3 2413 aaPredicted RBP-0.07□□□□□ -2.42
PFDN4-202ENST00000441080 TRAV30A0A087WSZ9 112 aa-0.07□□□□□ -2.42
PFDN4-202ENST00000441080 ZNF815PA8K554 130 aa-0.07□□□□□ -2.42
PFDN4-202ENST00000441080 C9JAW5 83 aa-0.07□□□□□ -2.42
PFDN4-202ENST00000441080 MCRIP1C9JLW8 97 aa-0.07□□□□□ -2.42
PFDN4-202ENST00000441080 K7EP34 96 aa-0.07□□□□□ -2.42
PFDN4-202ENST00000441080 M0R2T5 61 aa-0.07□□□□□ -2.42
PFDN4-202ENST00000441080 SSSCA1O60232 199 aa-0.07□□□□□ -2.42
PFDN4-202ENST00000441080 OR2H2O95918 312 aa-0.07□□□□□ -2.42
PFDN4-202ENST00000441080 APODP05090 189 aa-0.07□□□□□ -2.42
PFDN4-202ENST00000441080 ACYP2P14621 99 aa-0.07□□□□□ -2.42
PFDN4-202ENST00000441080 WFDC2Q14508 124 aa-0.07□□□□□ -2.42
PFDN4-202ENST00000441080 DEFB112Q30KQ8 113 aa-0.07□□□□□ -2.42
PFDN4-202ENST00000441080 DEFB110Q30KQ9 67 aa-0.07□□□□□ -2.42
PFDN4-202ENST00000441080 FAM74A4Q5TZK3 123 aa-0.07□□□□□ -2.42
PFDN4-202ENST00000441080 Q5VSD8 79 aa-0.07□□□□□ -2.42
PFDN4-202ENST00000441080 SSBP3-AS1Q7Z2R9 100 aa-0.07□□□□□ -2.42
PFDN4-202ENST00000441080 DEFB105AQ8NG35 78 aa-0.07□□□□□ -2.42
PFDN4-202ENST00000441080 PPP1R1CQ8WVI7 109 aa-0.07□□□□□ -2.42
PFDN4-202ENST00000441080 SKA2Q8WVK7 121 aaPredicted RBP-0.07□□□□□ -2.42
PFDN4-202ENST00000441080 TMEM141Q96I45 108 aa-0.07□□□□□ -2.42
PFDN4-202ENST00000441080 ABCA1O95477 2261 aa-0.07□□□□□ -2.42
PFDN4-202ENST00000441080 NCOR2Q9Y618 2525 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 TRGV1A0A0A0MS02 117 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 A0A0D9SFI3 127 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 TCRBV3S1A0A5B6 114 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 CLPSL1A2RUU4 121 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 ZNF670-ZNF695F2Z2N8 137 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 DPM2O94777 84 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 NCR2O95944 276 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 IFNGP01579 166 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 TFF1P04155 84 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 PRM1P04553 51 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 PYYP10082 97 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 COX4I1P13073 169 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 SPRR1AP35321 89 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 DEFB1P60022 68 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 PLGLB1Q02325 96 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 PIGYQ3MUY2 71 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 RPL7L1Q6DKI1 246 aaKnown RBP-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 OR8I2Q8N0Y5 310 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 PPDPFLQ8WWR9 84 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 VPS25Q9BRG1 176 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 SCN3BQ9NY72 215 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 CALML5Q9NZT1 146 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 SPCS1Q9Y6A9 102 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 JMJD1CQ15652 2540 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 SRRM2Q9UQ35 2752 aaKnown RBP-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 RREB1Q92766 1687 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 MYH9P35579 1960 aaKnown RBP-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 ABCA4P78363 2273 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 HIVEP3Q5T1R4 2406 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 FLNCQ14315 2725 aa-0.08□□□□□ -2.42
PFDN4-202ENST00000441080 NHSL1Q5SYE7 1610 aa-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 IQSEC2Q5JU85 1478 aa-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 IGSF10Q6WRI0 2623 aa-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 HRNRQ86YZ3 2850 aaPredicted RBP-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 ERCC6L2Q5T890 1561 aa-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 OVOS2A0A0G2JMS6 1433 aa-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 CASKIN1Q8WXD9 1431 aa-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 CTXND1A0A1B0GTU2 59 aa-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 UBE2L5PA0A1B0GUS4 154 aa-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 SPAARA0A1B0GVQ0 90 aa-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 CPSF4LA6NMK7 179 aaKnown RBP-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 J3KT08 172 aa-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 DEGS1O15121 323 aa-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 SIX6O95475 246 aa-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 NEFHP12036 1026 aa-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 FGF7P21781 194 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms