RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 TEX49A0A1B0GTD5 131 aa-1.07□□□□□ -2.58
MIR548I3-201ENST00000408378 TMEM114B3SHH9 223 aa-1.07□□□□□ -2.58
MIR548I3-201ENST00000408378 HMGB3O15347 200 aaKnown RBP-1.07□□□□□ -2.58
MIR548I3-201ENST00000408378 BANF1O75531 89 aa-1.07□□□□□ -2.58
MIR548I3-201ENST00000408378 SERPINA1P01009 418 aa-1.07□□□□□ -2.58
MIR548I3-201ENST00000408378 MT-ND6P03923 174 aa-1.07□□□□□ -2.58
MIR548I3-201ENST00000408378 RPL35P42766 123 aaKnown RBP-1.07□□□□□ -2.58
MIR548I3-201ENST00000408378 TAF1AQ15573 450 aaPredicted RBP-1.07□□□□□ -2.58
MIR548I3-201ENST00000408378 Q6ZRX8 168 aa-1.07□□□□□ -2.58
MIR548I3-201ENST00000408378 UBE2DNLQ8IWF7 75 aa-1.07□□□□□ -2.58
MIR548I3-201ENST00000408378 CNPY4Q8N129 248 aa-1.07□□□□□ -2.58
MIR548I3-201ENST00000408378 OR5A2Q8NGI9 324 aa-1.07□□□□□ -2.58
MIR548I3-201ENST00000408378 OR10X1Q8NGY0 326 aa-1.07□□□□□ -2.58
MIR548I3-201ENST00000408378 DIRC1Q969H9 104 aa-1.07□□□□□ -2.58
MIR548I3-201ENST00000408378 NMNAT1Q9HAN9 279 aaPredicted RBP-1.07□□□□□ -2.58
MIR548I3-201ENST00000408378 TMEM242Q9NWH2 141 aa-1.07□□□□□ -2.58
MIR548I3-201ENST00000408378 ATP6V1DQ9Y5K8 247 aa-1.07□□□□□ -2.58
MIR548I3-201ENST00000408378 MPC1Q9Y5U8 109 aa-1.07□□□□□ -2.58
MIR548I3-201ENST00000408378 FGD6Q6ZV73 1430 aa-1.07□□□□□ -2.58
MIR548I3-201ENST00000408378 USP9XQ93008 2570 aaPredicted RBP-1.07□□□□□ -2.58
MIR548I3-201ENST00000408378 OGNP20774 298 aaKnown RBP-1.08□□□□□ -2.58
MIR548I3-201ENST00000408378 SDC4P31431 198 aa-1.08□□□□□ -2.58
MIR548I3-201ENST00000408378 NCALDP61601 193 aa-1.08□□□□□ -2.58
MIR548I3-201ENST00000408378 HSPE1P61604 102 aaKnown RBP-1.08□□□□□ -2.58
MIR548I3-201ENST00000408378 SCGB2B2Q4G0G5 96 aa-1.08□□□□□ -2.58
MIR548I3-201ENST00000408378 BTF3L4Q96K17 158 aa-1.08□□□□□ -2.58
MIR548I3-201ENST00000408378 CCDC42Q96M95 316 aa-1.08□□□□□ -2.58
MIR548I3-201ENST00000408378 MCEEQ96PE7 176 aa-1.08□□□□□ -2.58
MIR548I3-201ENST00000408378 OR2H1Q9GZK4 316 aa-1.08□□□□□ -2.58
MIR548I3-201ENST00000408378 TAF9BQ9HBM6 251 aa-1.08□□□□□ -2.58
MIR548I3-201ENST00000408378 CCDC144AA2RUR9 1427 aa-1.08□□□□□ -2.58
MIR548I3-201ENST00000408378 KIAA1107Q9UPP5 1409 aa-1.08□□□□□ -2.58
MIR548I3-201ENST00000408378 CDK12Q9NYV4 1490 aaPredicted RBP-1.09□□□□□ -2.58
MIR548I3-201ENST00000408378 C5orf58C9J3I9 102 aa-1.09□□□□□ -2.58
MIR548I3-201ENST00000408378 K7EQZ3 153 aa-1.09□□□□□ -2.58
MIR548I3-201ENST00000408378 AIPO00170 330 aa-1.09□□□□□ -2.58
MIR548I3-201ENST00000408378 CDC42EP2O14613 210 aa-1.09□□□□□ -2.58
MIR548I3-201ENST00000408378 RPP14O95059 124 aaKnown RBP-1.09□□□□□ -2.58
MIR548I3-201ENST00000408378 NDUFC2O95298 119 aa-1.09□□□□□ -2.58
MIR548I3-201ENST00000408378 SPINK8P0C7L1 97 aa-1.09□□□□□ -2.58
MIR548I3-201ENST00000408378 TAS2R41P59536 307 aa-1.09□□□□□ -2.58
MIR548I3-201ENST00000408378 CLEC2BQ92478 149 aa-1.09□□□□□ -2.58
MIR548I3-201ENST00000408378 IL20Q9NYY1 176 aa-1.09□□□□□ -2.58
MIR548I3-201ENST00000408378 PLECQ15149 4684 aaKnown RBP-1.09□□□□□ -2.58
MIR548I3-201ENST00000408378 PLXNA1Q9UIW2 1896 aa-1.09□□□□□ -2.58
MIR548I3-201ENST00000408378 ANK3Q12955 4377 aaKnown RBP-1.1□□□□□ -2.59
MIR548I3-201ENST00000408378 SPTBN4Q9H254 2564 aa-1.1□□□□□ -2.59
MIR548I3-201ENST00000408378 RBAKDNA6NC62 111 aa-1.1□□□□□ -2.59
MIR548I3-201ENST00000408378 IFITM5A6NNB3 132 aa-1.1□□□□□ -2.59
MIR548I3-201ENST00000408378 FAM25EA8MYX2 175 aa-1.1□□□□□ -2.59
MIR548I3-201ENST00000408378 ZNF670-ZNF695F2Z2N8 137 aa-1.1□□□□□ -2.59
MIR548I3-201ENST00000408378 KPNA4O00629 521 aaPredicted RBP-1.1□□□□□ -2.59
MIR548I3-201ENST00000408378 APOC1P02654 83 aa-1.1□□□□□ -2.59
MIR548I3-201ENST00000408378 SAA1P0DJI8 122 aaPredicted RBP-1.1□□□□□ -2.59
MIR548I3-201ENST00000408378 TPT1P13693 172 aaKnown RBP-1.1□□□□□ -2.59
MIR548I3-201ENST00000408378 GCHFRP30047 84 aa-1.1□□□□□ -2.59
MIR548I3-201ENST00000408378 GTF2A1P52655 376 aaPredicted RBP-1.1□□□□□ -2.59
MIR548I3-201ENST00000408378 LSM6P62312 80 aaKnown RBP-1.1□□□□□ -2.59
MIR548I3-201ENST00000408378 ITGB3BPQ13352 177 aaPredicted RBP-1.1□□□□□ -2.59
MIR548I3-201ENST00000408378 INSL4Q14641 139 aa-1.1□□□□□ -2.59
MIR548I3-201ENST00000408378 KRTAP6-2Q3LI66 62 aa-1.1□□□□□ -2.59
MIR548I3-201ENST00000408378 PAIP2Q9BPZ3 127 aaKnown RBP-1.1□□□□□ -2.59
MIR548I3-201ENST00000408378 LLPHQ9BRT6 129 aaKnown RBP-1.1□□□□□ -2.59
MIR548I3-201ENST00000408378 FAM32AQ9Y421 112 aaKnown RBP-1.1□□□□□ -2.59
MIR548I3-201ENST00000408378 KIAA0100Q14667 2235 aaKnown RBP-1.1□□□□□ -2.59
MIR548I3-201ENST00000408378 COL12A1Q99715 3063 aa-1.11□□□□□ -2.59
MIR548I3-201ENST00000408378 ZFYVE9O95405 1425 aa-1.11□□□□□ -2.59
MIR548I3-201ENST00000408378 TRBV10-1A0A0K0K1A3 114 aa-1.11□□□□□ -2.59
MIR548I3-201ENST00000408378 SMIM23A6NLE4 172 aa-1.11□□□□□ -2.59
MIR548I3-201ENST00000408378 RIIAD1A6NNX1 92 aa-1.11□□□□□ -2.59
MIR548I3-201ENST00000408378 LOC730098B7Z3J9 87 aa-1.11□□□□□ -2.59
MIR548I3-201ENST00000408378 M0QX08 132 aa-1.11□□□□□ -2.59
MIR548I3-201ENST00000408378 TPM3P06753 285 aa-1.11□□□□□ -2.59
MIR548I3-201ENST00000408378 RPS17P08708 135 aaKnown RBP-1.11□□□□□ -2.59
MIR548I3-201ENST00000408378 COX4I1P13073 169 aa-1.11□□□□□ -2.59
MIR548I3-201ENST00000408378 SPRR2AP35326 72 aa-1.11□□□□□ -2.59
MIR548I3-201ENST00000408378 PI4KAP42356 2102 aa-1.11□□□□□ -2.59
MIR548I3-201ENST00000408378 GNG5P63218 68 aa-1.11□□□□□ -2.59
MIR548I3-201ENST00000408378 UNQ5815/PRO19632Q6UWF5 114 aa-1.11□□□□□ -2.59
MIR548I3-201ENST00000408378 NEK7Q8TDX7 302 aa-1.11□□□□□ -2.59
MIR548I3-201ENST00000408378 FKBP11Q9NYL4 201 aa-1.11□□□□□ -2.59
MIR548I3-201ENST00000408378 NIPBLQ6KC79 2804 aaeCLIP-1.11□□□□□ -2.59
MIR548I3-201ENST00000408378 ABCA13Q86UQ4 5058 aa-1.11□□□□□ -2.59
MIR548I3-201ENST00000408378 PCNX1Q96RV3 2341 aa-1.11□□□□□ -2.59
MIR548I3-201ENST00000408378 NCAPD3P42695 1498 aa-1.12□□□□□ -2.59
MIR548I3-201ENST00000408378 FAT3Q8TDW7 4589 aa-1.12□□□□□ -2.59
MIR548I3-201ENST00000408378 TRBV7-1A0A0A6YYK4 115 aa-1.12□□□□□ -2.59
MIR548I3-201ENST00000408378 TRAV22A0A0B4J277 110 aa-1.12□□□□□ -2.59
MIR548I3-201ENST00000408378 TMEM14DPA8MWL7 114 aa-1.12□□□□□ -2.59
MIR548I3-201ENST00000408378 H7C1C5 153 aa-1.12□□□□□ -2.59
MIR548I3-201ENST00000408378 EDF1O60869 148 aaKnown RBP-1.12□□□□□ -2.59
MIR548I3-201ENST00000408378 OR2H2O95918 312 aa-1.12□□□□□ -2.59
MIR548I3-201ENST00000408378 CYBAP13498 195 aa-1.12□□□□□ -2.59
MIR548I3-201ENST00000408378 LCN6P62502 163 aa-1.12□□□□□ -2.59
MIR548I3-201ENST00000408378 TPM4P67936 248 aa-1.12□□□□□ -2.59
MIR548I3-201ENST00000408378 RTL8BQ17RB0 113 aa-1.12□□□□□ -2.59
MIR548I3-201ENST00000408378 LIN52Q52LA3 116 aa-1.12□□□□□ -2.59
MIR548I3-201ENST00000408378 AKIRIN2Q53H80 203 aa-1.12□□□□□ -2.59
MIR548I3-201ENST00000408378 NUP35Q8NFH5 326 aa-1.12□□□□□ -2.59
MIR548I3-201ENST00000408378 OR8J2Q8NGG1 315 aa-1.12□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms