RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 AEBP2Q6ZN18 517 aaPredicted RBP22.43■■□□□ 1.18
MIR548I3-201ENST00000408378 CHIC1Q5VXU3 224 aa20.93■□□□□ 0.94
MIR548I3-201ENST00000408378 SENP3Q9H4L4 574 aaPredicted RBP19.19■□□□□ 0.66
MIR548I3-201ENST00000408378 PHF23Q9BUL5 403 aaPredicted RBP18.89■□□□□ 0.61
MIR548I3-201ENST00000408378 FOXD1Q16676 465 aa18.02■□□□□ 0.48
MIR548I3-201ENST00000408378 POTEDQ86YR6 584 aa17.9■□□□□ 0.46
MIR548I3-201ENST00000408378 MSH5O43196 834 aa17.07■□□□□ 0.32
MIR548I3-201ENST00000408378 PIAS4Q8N2W9 510 aaPredicted RBP16.72■□□□□ 0.27
MIR548I3-201ENST00000408378 PPP6R1Q9UPN7 881 aa16.34■□□□□ 0.21
MIR548I3-201ENST00000408378 ADRA2BP18089 450 aa16.29■□□□□ 0.2
MIR548I3-201ENST00000408378 PLPPR3Q6T4P5 718 aa16.15■□□□□ 0.18
MIR548I3-201ENST00000408378 CACNB1Q02641 598 aaPredicted RBP15.18■□□□□ 0.02
MIR548I3-201ENST00000408378 MAPK8IP2Q13387 824 aaPredicted RBP15.18■□□□□ 0.02
MIR548I3-201ENST00000408378 DMRT2Q9Y5R5 561 aa15.1■□□□□ 0.01
MIR548I3-201ENST00000408378 SCAF1Q9H7N4 1312 aaKnown RBP14.81□□□□□ -0.04
MIR548I3-201ENST00000408378 DCAF8L1A6NGE4 600 aa14.73□□□□□ -0.05
MIR548I3-201ENST00000408378 RNF39Q9H2S5 420 aa14.51□□□□□ -0.09
MIR548I3-201ENST00000408378 HOXD11P31277 338 aaPredicted RBP14.24□□□□□ -0.13
MIR548I3-201ENST00000408378 C1QBPQ07021 282 aaKnown RBP14.23□□□□□ -0.13
MIR548I3-201ENST00000408378 PPP4R3CPQ6ZMV5 832 aa14.11□□□□□ -0.15
MIR548I3-201ENST00000408378 RNF216Q9NWF9 866 aaPredicted RBP13.98□□□□□ -0.17
MIR548I3-201ENST00000408378 CNKSR2Q8WXI2 1034 aa13.95□□□□□ -0.18
MIR548I3-201ENST00000408378 POTEHQ6S545 545 aa13.89□□□□□ -0.19
MIR548I3-201ENST00000408378 DNAJC5BQ9UF47 199 aa13.75□□□□□ -0.21
MIR548I3-201ENST00000408378 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.71□□□□□ -0.21
MIR548I3-201ENST00000408378 CAPN15O75808 1086 aa13.41□□□□□ -0.26
MIR548I3-201ENST00000408378 DSG3P32926 999 aa13.38□□□□□ -0.27
MIR548I3-201ENST00000408378 SPINK5Q9NQ38 1064 aaPredicted RBP13.36□□□□□ -0.27
MIR548I3-201ENST00000408378 NCBP3Q53F19 620 aaKnown RBP13.32□□□□□ -0.28
MIR548I3-201ENST00000408378 U3KPZ7 1027 aaPredicted RBP13.29□□□□□ -0.28
MIR548I3-201ENST00000408378 NPM3O75607 178 aaKnown RBP13.16□□□□□ -0.3
MIR548I3-201ENST00000408378 ABCB7O75027 752 aa13.07□□□□□ -0.32
MIR548I3-201ENST00000408378 TRHP20396 242 aaPredicted RBP13.04□□□□□ -0.32
MIR548I3-201ENST00000408378 ZNF219Q9P2Y4 722 aaPredicted RBP12.86□□□□□ -0.35
MIR548I3-201ENST00000408378 CHRDL2Q6WN34 429 aa12.8□□□□□ -0.36
MIR548I3-201ENST00000408378 APLP2Q06481 763 aa12.79□□□□□ -0.36
MIR548I3-201ENST00000408378 RBM42Q9BTD8 480 aaKnown RBP12.76□□□□□ -0.37
MIR548I3-201ENST00000408378 SLC4A2P04920 1241 aa12.73□□□□□ -0.37
MIR548I3-201ENST00000408378 SP7Q8TDD2 431 aaPredicted RBP12.69□□□□□ -0.38
MIR548I3-201ENST00000408378 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.61□□□□□ -0.39
MIR548I3-201ENST00000408378 HNRNPUL2Q1KMD3 747 aaKnown RBP12.61□□□□□ -0.39
MIR548I3-201ENST00000408378 SAMD1Q6SPF0 538 aaPredicted RBP12.53□□□□□ -0.4
MIR548I3-201ENST00000408378 POLA2Q14181 598 aa12.47□□□□□ -0.41
MIR548I3-201ENST00000408378 HAX1O00165 279 aa12.38□□□□□ -0.43
MIR548I3-201ENST00000408378 PIP4P2Q8N4L2 257 aa12.36□□□□□ -0.43
MIR548I3-201ENST00000408378 KCNA4P22459 653 aa12.34□□□□□ -0.43
MIR548I3-201ENST00000408378 AKT1S1Q96B36 256 aa12.32□□□□□ -0.44
MIR548I3-201ENST00000408378 REM2Q8IYK8 340 aaPredicted RBP12.25□□□□□ -0.45
MIR548I3-201ENST00000408378 MYCNP04198 464 aaPredicted RBP12.16□□□□□ -0.46
MIR548I3-201ENST00000408378 PITPNM1O00562 1244 aa12.15□□□□□ -0.46
MIR548I3-201ENST00000408378 EVX2Q03828 476 aa12.15□□□□□ -0.46
MIR548I3-201ENST00000408378 OSCARQ8IYS5 282 aa12.13□□□□□ -0.47
MIR548I3-201ENST00000408378 FXR2P51116 673 aaKnown RBP eCLIP12.11□□□□□ -0.47
MIR548I3-201ENST00000408378 ZBTB12Q9Y330 459 aaPredicted RBP12.07□□□□□ -0.48
MIR548I3-201ENST00000408378 ATF5Q9Y2D1 282 aaPredicted RBP12.01□□□□□ -0.49
MIR548I3-201ENST00000408378 LHX8Q68G74 356 aa11.92□□□□□ -0.5
MIR548I3-201ENST00000408378 PLSCR2Q9NRY7 297 aa11.87□□□□□ -0.51
MIR548I3-201ENST00000408378 PRKAR2AP13861 404 aaKnown RBP11.85□□□□□ -0.51
MIR548I3-201ENST00000408378 GABBR2O75899 941 aa11.81□□□□□ -0.52
MIR548I3-201ENST00000408378 CLEC11AQ9Y240 323 aa11.8□□□□□ -0.52
MIR548I3-201ENST00000408378 C19orf67A6NJJ6 358 aa11.76□□□□□ -0.53
MIR548I3-201ENST00000408378 FOXD4L1Q9NU39 408 aa11.68□□□□□ -0.54
MIR548I3-201ENST00000408378 SPDYE2BA6NHP3 402 aa11.65□□□□□ -0.54
MIR548I3-201ENST00000408378 SPDYE6P0CI01 402 aa11.65□□□□□ -0.54
MIR548I3-201ENST00000408378 SPDYE2Q495Y8 402 aa11.65□□□□□ -0.54
MIR548I3-201ENST00000408378 SPDYE1Q8NFV5 336 aaPredicted RBP11.65□□□□□ -0.54
MIR548I3-201ENST00000408378 CHADLQ6NUI6 762 aa11.64□□□□□ -0.55
MIR548I3-201ENST00000408378 FBLN2P98095 1184 aa11.56□□□□□ -0.56
MIR548I3-201ENST00000408378 POTEIP0CG38 1075 aa11.55□□□□□ -0.56
MIR548I3-201ENST00000408378 SLC4A1APQ9BWU0 796 aaKnown RBP11.5□□□□□ -0.57
MIR548I3-201ENST00000408378 ZNF692Q9BU19 519 aaPredicted RBP11.49□□□□□ -0.57
MIR548I3-201ENST00000408378 CD44P16070 742 aaKnown RBP11.44□□□□□ -0.58
MIR548I3-201ENST00000408378 PRR29P0C7W0 189 aa11.43□□□□□ -0.58
MIR548I3-201ENST00000408378 SSUH2Q9Y2M2 353 aa11.41□□□□□ -0.58
MIR548I3-201ENST00000408378 DCBLD2Q96PD2 775 aa11.39□□□□□ -0.59
MIR548I3-201ENST00000408378 MKRN4PQ13434 485 aaPredicted RBP11.37□□□□□ -0.59
MIR548I3-201ENST00000408378 ZBTB22O15209 634 aa11.32□□□□□ -0.6
MIR548I3-201ENST00000408378 PABPN1Q86U42 306 aaKnown RBP eCLIP11.31□□□□□ -0.6
MIR548I3-201ENST00000408378 POTEMA6NI47 508 aa11.29□□□□□ -0.6
MIR548I3-201ENST00000408378 FARP1Q9Y4F1 1045 aaPredicted RBP11.29□□□□□ -0.6
MIR548I3-201ENST00000408378 ATXN8OSP0DMR3 200 aa11.28□□□□□ -0.6
MIR548I3-201ENST00000408378 OTUD5Q96G74 571 aa11.25□□□□□ -0.61
MIR548I3-201ENST00000408378 POTEGQ6S5H5 508 aa11.23□□□□□ -0.61
MIR548I3-201ENST00000408378 CLCN6P51797 869 aa11.22□□□□□ -0.61
MIR548I3-201ENST00000408378 ZRANB1Q9UGI0 708 aa11.19□□□□□ -0.62
MIR548I3-201ENST00000408378 POTEB2H3BUK9 544 aa11.17□□□□□ -0.62
MIR548I3-201ENST00000408378 GALR2O43603 387 aaPredicted RBP11.15□□□□□ -0.62
MIR548I3-201ENST00000408378 ZNF579Q8NAF0 562 aaKnown RBP11.15□□□□□ -0.62
MIR548I3-201ENST00000408378 PHF12Q96QT6 1004 aa10.99□□□□□ -0.65
MIR548I3-201ENST00000408378 PELP1Q8IZL8 1130 aaKnown RBP10.98□□□□□ -0.65
MIR548I3-201ENST00000408378 PCDH10Q9P2E7 1040 aa10.98□□□□□ -0.65
MIR548I3-201ENST00000408378 CREBZFQ9NS37 354 aa10.95□□□□□ -0.66
MIR548I3-201ENST00000408378 FAM163AQ96GL9 167 aaPredicted RBP10.93□□□□□ -0.66
MIR548I3-201ENST00000408378 PAK3O75914 559 aaPredicted RBP10.92□□□□□ -0.66
MIR548I3-201ENST00000408378 METRNQ9UJH8 293 aa10.91□□□□□ -0.66
MIR548I3-201ENST00000408378 POTEJP0CG39 1038 aa10.88□□□□□ -0.67
MIR548I3-201ENST00000408378 LCE2DQ5TA82 110 aaPredicted RBP10.87□□□□□ -0.67
MIR548I3-201ENST00000408378 MAMSTRQ6ZN01 415 aa10.81□□□□□ -0.68
MIR548I3-201ENST00000408378 SLC39A7Q92504 469 aa10.81□□□□□ -0.68
MIR548I3-201ENST00000408378 MS4A3Q96HJ5 214 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms