RNA–Protein interactions for RNA: YPL260W

YPL260W, Transcript of Putative substrate of cAMP-dependent protein kinase (PKA), yeast

Gene YPL260W, Length 1,656 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPL260W	YPL260W	ATH1	P48016	1211 aa		4.55	□□□□□ -1.68
YPL260W	YPL260W	YKE2	P52553	114 aa		4.55	□□□□□ -1.68
YPL260W	YPL260W	ZRG17	P53735	605 aa		4.55	□□□□□ -1.68
YPL260W	YPL260W	UBP2	Q01476	1272 aa		4.55	□□□□□ -1.68
YPL260W	YPL260W	PEX29	Q03370	554 aa		4.55	□□□□□ -1.68
YPL260W	YPL260W	RCN2	Q12044	265 aa		4.55	□□□□□ -1.68
YPL260W	YPL260W	SPE3	Q12074	293 aa	Known RBP	4.55	□□□□□ -1.68
YPL260W	YPL260W	YOR131C	Q12486	218 aa		4.55	□□□□□ -1.68
YPL260W	YPL260W	FAS2	P19097	1887 aa	Known RBP	4.54	□□□□□ -1.68
YPL260W	YPL260W	SEM1	O94742	89 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	MF(ALPHA)1	P01149	165 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	MPH2	P0CD99	609 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	CDC24	P11433	854 aa	Predicted RBP	4.54	□□□□□ -1.68
YPL260W	YPL260W	ATR1	P13090	542 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	GLN4	P13188	809 aa	Known RBP	4.54	□□□□□ -1.68
YPL260W	YPL260W	GLK1	P17709	500 aa	Known RBP	4.54	□□□□□ -1.68
YPL260W	YPL260W	SIT4	P20604	311 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	CLB3	P24870	427 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	PTP1	P25044	335 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	MCM4	P30665	933 aa	Known RBP	4.54	□□□□□ -1.68
YPL260W	YPL260W	TYE7	P33122	291 aa	Predicted RBP	4.54	□□□□□ -1.68
YPL260W	YPL260W	TDP1	P38319	544 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	YHI9	P38765	294 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	RTC3	P38804	111 aa	Predicted RBP	4.54	□□□□□ -1.68
YPL260W	YPL260W	MTW1	P39731	289 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	RTT105	P40063	208 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	AGE2	P40529	298 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	CST6	P40535	587 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	ISM1	P48526	1002 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	CUE3	P53137	624 aa	Known RBP	4.54	□□□□□ -1.68
YPL260W	YPL260W	GOR1	P53839	350 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	EEB1	Q02891	456 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	GYP1	Q08484	637 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
YPL260W	YPL260W	LEU2	P04173	364 aa	Predicted RBP	4.54	□□□□□ -1.68
YPL260W	YPL260W	YGL041W-A	P0C5N3	154 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	MRP2	P10663	115 aa	Predicted RBP	4.54	□□□□□ -1.68
YPL260W	YPL260W	COQ8	P27697	501 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	KIP2	P28743	706 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	VMA6	P32366	345 aa	Known RBP	4.54	□□□□□ -1.68
YPL260W	YPL260W	TYS1	P36421	394 aa	Known RBP	4.54	□□□□□ -1.68
YPL260W	YPL260W	PFF1	P38244	976 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	RFC3	P38629	340 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	TRM5	P38793	499 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	MXR1	P40029	184 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	ALD5	P40047	520 aa	Known RBP	4.54	□□□□□ -1.68
YPL260W	YPL260W	BUD6	P41697	788 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	LSM1	P47017	172 aa	Known RBP	4.54	□□□□□ -1.68
YPL260W	YPL260W	YGR111W	P53265	400 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	RPL6A	Q02326	176 aa	Known RBP	4.54	□□□□□ -1.68
YPL260W	YPL260W	URH1	Q04179	340 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	SOV1	Q04748	898 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	YPR196W	Q06595	470 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	YAP7	Q08182	245 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	SGT1	Q08446	395 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	AIM41	Q12032	185 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	ATG34	Q12292	412 aa		4.54	□□□□□ -1.68
YPL260W	YPL260W	ADE8	P04161	214 aa		4.53	□□□□□ -1.68
YPL260W	YPL260W	DSF1	P0CX08	502 aa		4.53	□□□□□ -1.68
YPL260W	YPL260W	YNR073C	P0CX09	502 aa		4.53	□□□□□ -1.68
YPL260W	YPL260W	RPS6A	P0CX37	236 aa	Known RBP	4.53	□□□□□ -1.68
YPL260W	YPL260W	RPS6B	P0CX38	236 aa	Predicted RBP	4.53	□□□□□ -1.68
YPL260W	YPL260W	GFA1	P14742	717 aa	Known RBP	4.53	□□□□□ -1.68
YPL260W	YPL260W	DBP5	P20449	482 aa	Known RBP	4.53	□□□□□ -1.68
YPL260W	YPL260W	URE2	P23202	354 aa	Known RBP	4.53	□□□□□ -1.68
YPL260W	YPL260W	SAC6	P32599	642 aa	Known RBP	4.53	□□□□□ -1.68
YPL260W	YPL260W	CYM1	P32898	989 aa		4.53	□□□□□ -1.68
YPL260W	YPL260W	NIC96	P34077	839 aa		4.53	□□□□□ -1.68
YPL260W	YPL260W	HES1	P35843	434 aa		4.53	□□□□□ -1.68
YPL260W	YPL260W	STB6	P36085	766 aa		4.53	□□□□□ -1.68
YPL260W	YPL260W	NTR2	P36118	322 aa	Predicted RBP	4.53	□□□□□ -1.68
YPL260W	YPL260W	GRS1	P38088	690 aa	Known RBP	4.53	□□□□□ -1.68
YPL260W	YPL260W	ECM21	P38167	1117 aa	Known RBP	4.53	□□□□□ -1.68
YPL260W	YPL260W	IMD2	P38697	523 aa	Known RBP	4.53	□□□□□ -1.68
YPL260W	YPL260W	BCD1	P38772	366 aa		4.53	□□□□□ -1.68
YPL260W	YPL260W	RRP8	P38961	392 aa	Known RBP	4.53	□□□□□ -1.68
YPL260W	YPL260W	VMA7	P39111	118 aa		4.53	□□□□□ -1.68
YPL260W	YPL260W	OAF1	P39720	1047 aa	Predicted RBP	4.53	□□□□□ -1.68
YPL260W	YPL260W	VFA1	P40080	203 aa		4.53	□□□□□ -1.68
YPL260W	YPL260W	NUP85	P46673	744 aa		4.53	□□□□□ -1.68
YPL260W	YPL260W	PSP2	P50109	593 aa	Known RBP	4.53	□□□□□ -1.68
YPL260W	YPL260W	TAF6	P53040	516 aa		4.53	□□□□□ -1.68
YPL260W	YPL260W	YGR125W	P53273	1036 aa		4.53	□□□□□ -1.68
YPL260W	YPL260W	UTP8	P53276	713 aa	Known RBP	4.53	□□□□□ -1.68
YPL260W	YPL260W	RPT6	Q01939	405 aa	Known RBP	4.53	□□□□□ -1.68
YPL260W	YPL260W	MAK10	Q02197	733 aa		4.53	□□□□□ -1.68
YPL260W	YPL260W	PET117	Q02771	107 aa		4.53	□□□□□ -1.68
YPL260W	YPL260W	BNA7	Q04066	261 aa		4.53	□□□□□ -1.68
YPL260W	YPL260W	BUD22	Q04347	519 aa	Known RBP	4.53	□□□□□ -1.68
YPL260W	YPL260W	YDL124W	Q07551	312 aa	Known RBP	4.53	□□□□□ -1.68
YPL260W	YPL260W	YLR001C	Q07895	862 aa		4.53	□□□□□ -1.68
YPL260W	YPL260W	TYW1	Q08960	810 aa	Known RBP	4.53	□□□□□ -1.68
YPL260W	YPL260W	MED2	Q12124	431 aa		4.53	□□□□□ -1.68
YPL260W	YPL260W	TRM11	Q12463	433 aa		4.53	□□□□□ -1.68
YPL260W	YPL260W	ATG11	Q12527	1178 aa		4.53	□□□□□ -1.68
YPL260W	YPL260W	SET6	Q12529	373 aa		4.53	□□□□□ -1.68
YPL260W	YPL260W	YPT6	Q99260	215 aa		4.53	□□□□□ -1.68
YPL260W	YPL260W	GPM1	P00950	247 aa	Known RBP	4.52	□□□□□ -1.69
YPL260W	YPL260W	MRP13	P12686	339 aa		4.52	□□□□□ -1.69
YPL260W	YPL260W	POL3	P15436	1097 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms