RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeast

Gene RPA43, Length 981 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPA43	YOR340C	COX11	P19516	300 aa	Known RBP	4.09	□□□□□ -1.75
RPA43	YOR340C	HEM12	P32347	362 aa	Predicted RBP	4.09	□□□□□ -1.75
RPA43	YOR340C	NIC96	P34077	839 aa		4.09	□□□□□ -1.75
RPA43	YOR340C	MAL31	P38156	614 aa		4.09	□□□□□ -1.75
RPA43	YOR340C	FAT1	P38225	669 aa		4.09	□□□□□ -1.75
RPA43	YOR340C	YBR053C	P38235	358 aa		4.09	□□□□□ -1.75
RPA43	YOR340C	PFF1	P38244	976 aa		4.09	□□□□□ -1.75
RPA43	YOR340C	SPC105	P53148	917 aa		4.09	□□□□□ -1.75
RPA43	YOR340C	BRE5	P53741	515 aa	Known RBP	4.09	□□□□□ -1.75
RPA43	YOR340C	TEX1	P53851	422 aa	Known RBP	4.09	□□□□□ -1.75
RPA43	YOR340C	MDG1	P53885	366 aa		4.09	□□□□□ -1.75
RPA43	YOR340C	MET14	Q02196	202 aa		4.09	□□□□□ -1.75
RPA43	YOR340C	SWI1	P09547	1314 aa		4.09	□□□□□ -1.75
RPA43	YOR340C	HCA4	P20448	770 aa	Known RBP	4.08	□□□□□ -1.76
RPA43	YOR340C	VPS24	P36095	224 aa	Known RBP	4.08	□□□□□ -1.76
RPA43	YOR340C	TRZ1	P36159	838 aa	Predicted RBP	4.08	□□□□□ -1.76
RPA43	YOR340C	APN2	P38207	520 aa		4.08	□□□□□ -1.76
RPA43	YOR340C	YHR112C	P38716	378 aa		4.08	□□□□□ -1.76
RPA43	YOR340C	SSZ1	P38788	538 aa	Known RBP	4.08	□□□□□ -1.76
RPA43	YOR340C	YJL163C	P46996	555 aa		4.08	□□□□□ -1.76
RPA43	YOR340C	RNR4	P49723	345 aa	Known RBP	4.08	□□□□□ -1.76
RPA43	YOR340C	SLD3	P53135	668 aa		4.08	□□□□□ -1.76
RPA43	YOR340C	COX18	P53239	316 aa		4.08	□□□□□ -1.76
RPA43	YOR340C	REC102	Q02721	264 aa		4.08	□□□□□ -1.76
RPA43	YOR340C	LEE1	Q02799	301 aa	Known RBP	4.08	□□□□□ -1.76
RPA43	YOR340C	UBP16	Q02863	499 aa		4.08	□□□□□ -1.76
RPA43	YOR340C	CTK1	Q03957	528 aa	Known RBP	4.08	□□□□□ -1.76
RPA43	YOR340C	ECM38	Q05902	660 aa	Predicted RBP	4.08	□□□□□ -1.76
RPA43	YOR340C	ADY4	Q05955	493 aa		4.08	□□□□□ -1.76
RPA43	YOR340C	PEX15	Q08215	383 aa		4.08	□□□□□ -1.76
RPA43	YOR340C	SWI6	P09959	803 aa		4.07	□□□□□ -1.76
RPA43	YOR340C	PYC1	P11154	1178 aa	Known RBP	4.07	□□□□□ -1.76
RPA43	YOR340C	ICL1	P28240	557 aa	Predicted RBP	4.07	□□□□□ -1.76
RPA43	YOR340C	HIS7	P33734	552 aa	Known RBP	4.07	□□□□□ -1.76
RPA43	YOR340C	FUI1	P38196	639 aa		4.07	□□□□□ -1.76
RPA43	YOR340C	BEM4	P39011	633 aa		4.07	□□□□□ -1.76
RPA43	YOR340C	EMP65	P40085	556 aa		4.07	□□□□□ -1.76
RPA43	YOR340C	SET2	P46995	733 aa	Known RBP	4.07	□□□□□ -1.76
RPA43	YOR340C	PIP2	P52960	996 aa		4.07	□□□□□ -1.76
RPA43	YOR340C	SQS1	P53866	767 aa	Known RBP	4.07	□□□□□ -1.76
RPA43	YOR340C	ERO1	Q03103	563 aa		4.07	□□□□□ -1.76
RPA43	YOR340C	YMR206W	Q03695	313 aa		4.07	□□□□□ -1.76
RPA43	YOR340C	IRC13	Q08630	104 aa		4.07	□□□□□ -1.76
RPA43	YOR340C	FIG2	P25653	1609 aa		4.06	□□□□□ -1.76
RPA43	YOR340C	GAL1	P04385	528 aa		4.06	□□□□□ -1.76
RPA43	YOR340C	PWP2	P25635	923 aa	Known RBP	4.06	□□□□□ -1.76
RPA43	YOR340C	SWE1	P32944	819 aa		4.06	□□□□□ -1.76
RPA43	YOR340C	BCD1	P38772	366 aa		4.06	□□□□□ -1.76
RPA43	YOR340C	CCT3	P39077	534 aa	Known RBP	4.06	□□□□□ -1.76
RPA43	YOR340C	HOS4	P40480	1083 aa		4.06	□□□□□ -1.76
RPA43	YOR340C	RSC8	P43609	557 aa	Known RBP	4.06	□□□□□ -1.76
RPA43	YOR340C	UBX4	P54730	416 aa		4.06	□□□□□ -1.76
RPA43	YOR340C	VMS1	Q04311	632 aa	Known RBP	4.06	□□□□□ -1.76
RPA43	YOR340C	OMS1	Q06668	471 aa		4.06	□□□□□ -1.76
RPA43	YOR340C	SGO1	Q08490	590 aa		4.06	□□□□□ -1.76
RPA43	YOR340C	GSC2	P40989	1895 aa		4.06	□□□□□ -1.76
RPA43	YOR340C	SSK22	P25390	1331 aa	Predicted RBP	4.05	□□□□□ -1.76
RPA43	YOR340C	MRP7	P12687	371 aa		4.05	□□□□□ -1.76
RPA43	YOR340C	PGI1	P12709	554 aa	Known RBP	4.05	□□□□□ -1.76
RPA43	YOR340C	GLN4	P13188	809 aa	Known RBP	4.05	□□□□□ -1.76
RPA43	YOR340C	RNR1	P21524	888 aa	Known RBP	4.05	□□□□□ -1.76
RPA43	YOR340C	SWC3	P31376	625 aa		4.05	□□□□□ -1.76
RPA43	YOR340C	FRD1	P32614	470 aa	Known RBP	4.05	□□□□□ -1.76
RPA43	YOR340C	RAD24	P32641	659 aa		4.05	□□□□□ -1.76
RPA43	YOR340C	YKU70	P32807	602 aa		4.05	□□□□□ -1.76
RPA43	YOR340C	NUP133	P36161	1157 aa		4.05	□□□□□ -1.76
RPA43	YOR340C	YHR202W	P38887	602 aa		4.05	□□□□□ -1.76
RPA43	YOR340C	GID8	P40208	455 aa		4.05	□□□□□ -1.76
RPA43	YOR340C	VID28	P40547	921 aa		4.05	□□□□□ -1.76
RPA43	YOR340C	MTL1	P53214	551 aa		4.05	□□□□□ -1.76
RPA43	YOR340C	NOP15	P53927	220 aa	Predicted RBP	4.05	□□□□□ -1.76
RPA43	YOR340C	SUB1	P54000	292 aa	Known RBP	4.05	□□□□□ -1.76
RPA43	YOR340C	YLR407W	Q06070	228 aa		4.05	□□□□□ -1.76
RPA43	YOR340C	MLC2	Q06580	163 aa		4.05	□□□□□ -1.76
RPA43	YOR340C	ISA1	Q07821	250 aa	Predicted RBP	4.05	□□□□□ -1.76
RPA43	YOR340C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
RPA43	YOR340C	RVB2	Q12464	471 aa	Known RBP	4.05	□□□□□ -1.76
RPA43	YOR340C	ATP12	P22135	325 aa		4.04	□□□□□ -1.76
RPA43	YOR340C	IMG2	P25642	146 aa	Predicted RBP	4.04	□□□□□ -1.76
RPA43	YOR340C	PTP2	P29461	750 aa		4.04	□□□□□ -1.76
RPA43	YOR340C	MVD1	P32377	396 aa	Known RBP	4.04	□□□□□ -1.76
RPA43	YOR340C	PPS1	P38148	807 aa		4.04	□□□□□ -1.76
RPA43	YOR340C	RIM4	P38741	713 aa		4.04	□□□□□ -1.76
RPA43	YOR340C	FMO1	P38866	432 aa		4.04	□□□□□ -1.76
RPA43	YOR340C	REV7	P38927	245 aa		4.04	□□□□□ -1.76
RPA43	YOR340C	VPS27	P40343	622 aa	Known RBP	4.04	□□□□□ -1.76
RPA43	YOR340C	BAP3	P41815	604 aa		4.04	□□□□□ -1.76
RPA43	YOR340C	UBC11	P52492	156 aa		4.04	□□□□□ -1.76
RPA43	YOR340C	TIM44	Q01852	431 aa		4.04	□□□□□ -1.76
RPA43	YOR340C	YMR210W	Q03649	449 aa		4.04	□□□□□ -1.76
RPA43	YOR340C	CEF1	Q03654	590 aa	Predicted RBP	4.04	□□□□□ -1.76
RPA43	YOR340C	ATG16	Q03818	150 aa		4.04	□□□□□ -1.76
RPA43	YOR340C	HMO1	Q03973	246 aa	Known RBP	4.04	□□□□□ -1.76
RPA43	YOR340C	SYF1	Q04048	859 aa	Predicted RBP	4.04	□□□□□ -1.76
RPA43	YOR340C	IRC3	Q06683	689 aa		4.04	□□□□□ -1.76
RPA43	YOR340C	DIB1	Q06819	143 aa	Predicted RBP	4.04	□□□□□ -1.76
RPA43	YOR340C	ACF2	Q12168	779 aa		4.04	□□□□□ -1.76
RPA43	YOR340C	ECM3	Q99252	613 aa		4.04	□□□□□ -1.76
RPA43	YOR340C	HRP1	Q99383	534 aa	Known RBP	4.04	□□□□□ -1.76
RPA43	YOR340C	RPS17A	P02407	136 aa	Known RBP	4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms