RNA–Protein interactions for RNA: YLR166C

SEC10, Transcript of Essential 100kDa subunit of the exocyst complex, yeast

Gene SEC10, Length 2,616 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC10	YLR166C	PCL8	Q08966	492 aa		0.75	□□□□□ -2.29
SEC10	YLR166C	YJU2	P28320	278 aa	Predicted RBP	0.74	□□□□□ -2.29
SEC10	YLR166C	LOT5	P34234	306 aa		0.74	□□□□□ -2.29
SEC10	YLR166C	MNN4	P36044	1178 aa		0.74	□□□□□ -2.29
SEC10	YLR166C	SSZ1	P38788	538 aa	Known RBP	0.74	□□□□□ -2.29
SEC10	YLR166C	YHR202W	P38887	602 aa		0.74	□□□□□ -2.29
SEC10	YLR166C	RCR2	Q03446	210 aa	Known RBP	0.74	□□□□□ -2.29
SEC10	YLR166C	SNU56	Q03782	492 aa	Known RBP	0.74	□□□□□ -2.29
SEC10	YLR166C	VHS3	Q08438	674 aa		0.74	□□□□□ -2.29
SEC10	YLR166C	TIP41	Q12199	356 aa		0.74	□□□□□ -2.29
SEC10	YLR166C	YFL068W	P0CX99	160 aa		0.74	□□□□□ -2.29
SEC10	YLR166C	YLL066W-A	P0CY00	160 aa		0.74	□□□□□ -2.29
SEC10	YLR166C	YLL067W-A	P0CY01	160 aa		0.74	□□□□□ -2.29
SEC10	YLR166C	PET127	P32606	800 aa		0.74	□□□□□ -2.29
SEC10	YLR166C	BRN1	P38170	754 aa		0.74	□□□□□ -2.29
SEC10	YLR166C	ROK1	P45818	564 aa	Predicted RBP	0.74	□□□□□ -2.29
SEC10	YLR166C	TIM50	Q02776	476 aa		0.74	□□□□□ -2.29
SEC10	YLR166C	DIG1	Q03063	452 aa	Known RBP	0.74	□□□□□ -2.29
SEC10	YLR166C	CEF1	Q03654	590 aa	Predicted RBP	0.74	□□□□□ -2.29
SEC10	YLR166C	STP4	Q07351	490 aa		0.74	□□□□□ -2.29
SEC10	YLR166C	TGS1	Q12052	315 aa		0.74	□□□□□ -2.29
SEC10	YLR166C	MRPL4	P36517	319 aa		0.73	□□□□□ -2.29
SEC10	YLR166C	YPT10	P38146	199 aa		0.73	□□□□□ -2.29
SEC10	YLR166C	YND1	P40009	630 aa		0.73	□□□□□ -2.29
SEC10	YLR166C	RTA1	P53047	317 aa		0.73	□□□□□ -2.29
SEC10	YLR166C	SHE10	P53075	577 aa		0.73	□□□□□ -2.29
SEC10	YLR166C	YGR054W	P53235	642 aa	Known RBP	0.73	□□□□□ -2.29
SEC10	YLR166C	BET4	Q00618	327 aa		0.73	□□□□□ -2.29
SEC10	YLR166C	SNP1	Q00916	300 aa	Predicted RBP	0.73	□□□□□ -2.29
SEC10	YLR166C	NHX1	Q04121	633 aa		0.73	□□□□□ -2.29
SEC10	YLR166C	CIT2	P08679	460 aa		0.73	□□□□□ -2.29
SEC10	YLR166C	RAD4	P14736	754 aa		0.73	□□□□□ -2.29
SEC10	YLR166C	STO1	P34160	861 aa	Known RBP	0.73	□□□□□ -2.29
SEC10	YLR166C	VTC3	Q02725	835 aa		0.73	□□□□□ -2.29
SEC10	YLR166C	ECM16	Q04217	1267 aa	Known RBP	0.73	□□□□□ -2.29
SEC10	YLR166C	CYK3	Q07533	885 aa		0.73	□□□□□ -2.29
SEC10	YLR166C	PNO1	Q99216	274 aa	Known RBP	0.73	□□□□□ -2.29
SEC10	YLR166C	PRP22	P24384	1145 aa	Known RBP	0.72	□□□□□ -2.29
SEC10	YLR166C	IMD2	P38697	523 aa	Known RBP	0.72	□□□□□ -2.29
SEC10	YLR166C	TOM71	P38825	639 aa	Known RBP	0.72	□□□□□ -2.29
SEC10	YLR166C	IMD3	P50095	523 aa	Known RBP	0.72	□□□□□ -2.29
SEC10	YLR166C	FDC1	Q03034	503 aa		0.72	□□□□□ -2.29
SEC10	YLR166C	YLR352W	Q06479	807 aa		0.72	□□□□□ -2.29
SEC10	YLR166C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	0.72	□□□□□ -2.29	not detected
SEC10	YLR166C	SSF2	Q12153	453 aa	Predicted RBP	0.72	□□□□□ -2.29
SEC10	YLR166C	AHA1	Q12449	350 aa	Known RBP	0.72	□□□□□ -2.29
SEC10	YLR166C	CET1	O13297	549 aa	Predicted RBP	0.72	□□□□□ -2.29
SEC10	YLR166C	HOP1	P20050	605 aa		0.72	□□□□□ -2.29
SEC10	YLR166C	IMG2	P25642	146 aa	Predicted RBP	0.72	□□□□□ -2.29
SEC10	YLR166C	RRT2	P38332	387 aa		0.72	□□□□□ -2.29
SEC10	YLR166C	YHR020W	P38708	688 aa	Known RBP	0.72	□□□□□ -2.29
SEC10	YLR166C	MNN1	P39106	762 aa		0.72	□□□□□ -2.29
SEC10	YLR166C	YEL068C	P39977	110 aa		0.72	□□□□□ -2.29
SEC10	YLR166C	NUG1	P40010	520 aa	Known RBP	0.72	□□□□□ -2.29
SEC10	YLR166C	CAF16	P43569	289 aa		0.72	□□□□□ -2.29
SEC10	YLR166C	YJR039W	P47107	1121 aa		0.72	□□□□□ -2.29
SEC10	YLR166C	YML020W	Q03722	664 aa		0.72	□□□□□ -2.29
SEC10	YLR166C	MAK32	P23060	363 aa		0.71	□□□□□ -2.3
SEC10	YLR166C	DHR2	P36009	735 aa	Predicted RBP	0.71	□□□□□ -2.3
SEC10	YLR166C	RKM3	P38222	552 aa		0.71	□□□□□ -2.3
SEC10	YLR166C	CRG1	P38892	291 aa	RIP-Chip data	0.71	□□□□□ -2.3	not detected
SEC10	YLR166C	TIM54	P47045	478 aa		0.71	□□□□□ -2.3
SEC10	YLR166C	YPT11	P48559	417 aa		0.71	□□□□□ -2.3
SEC10	YLR166C	GPD1	Q00055	391 aa	Known RBP	0.71	□□□□□ -2.3
SEC10	YLR166C	FLC1	Q08967	793 aa		0.71	□□□□□ -2.3
SEC10	YLR166C	PFA4	Q12006	378 aa		0.71	□□□□□ -2.3
SEC10	YLR166C	YER175W-A	Q8TGU4	54 aa		0.71	□□□□□ -2.3
SEC10	YLR166C	CAN1	P04817	590 aa		0.71	□□□□□ -2.3
SEC10	YLR166C	RPL42A	P0CX27	106 aa	Known RBP	0.71	□□□□□ -2.3
SEC10	YLR166C	RPL42B	P0CX28	106 aa	Known RBP	0.71	□□□□□ -2.3
SEC10	YLR166C	IME1	P21190	360 aa		0.71	□□□□□ -2.3
SEC10	YLR166C	FTH1	P38310	465 aa		0.71	□□□□□ -2.3
SEC10	YLR166C	UBP7	P40453	1071 aa		0.71	□□□□□ -2.3
SEC10	YLR166C	CIN1	P40987	1014 aa		0.71	□□□□□ -2.3
SEC10	YLR166C	USA1	Q03714	838 aa		0.71	□□□□□ -2.3
SEC10	YLR166C	WRS1	Q12109	432 aa	Known RBP	0.71	□□□□□ -2.3
SEC10	YLR166C	DCS2	Q12123	353 aa		0.71	□□□□□ -2.3
SEC10	YLR166C	GET3	Q12154	354 aa	Known RBP	0.71	□□□□□ -2.3
SEC10	YLR166C	ILS1	P09436	1072 aa	Known RBP	0.7	□□□□□ -2.3
SEC10	YLR166C	CAP1	P28495	268 aa	Known RBP	0.7	□□□□□ -2.3
SEC10	YLR166C	HOG1	P32485	435 aa		0.7	□□□□□ -2.3
SEC10	YLR166C	CCL1	P37366	393 aa		0.7	□□□□□ -2.3
SEC10	YLR166C	BUD8	P41698	603 aa		0.7	□□□□□ -2.3
SEC10	YLR166C	SND1	Q04007	877 aa		0.7	□□□□□ -2.3
SEC10	YLR166C	NOP8	Q08287	484 aa	Predicted RBP	0.7	□□□□□ -2.3
SEC10	YLR166C	CSR2	Q12734	1121 aa		0.7	□□□□□ -2.3
SEC10	YLR166C	CDC9	P04819	755 aa		0.7	□□□□□ -2.3
SEC10	YLR166C	SEC18	P18759	758 aa	Known RBP	0.7	□□□□□ -2.3
SEC10	YLR166C	KRE9	P39005	276 aa		0.7	□□□□□ -2.3
SEC10	YLR166C	YEL025C	P39991	1188 aa		0.7	□□□□□ -2.3
SEC10	YLR166C	FTR1	P40088	404 aa		0.7	□□□□□ -2.3
SEC10	YLR166C	MKT1	P40850	830 aa	Known RBP	0.7	□□□□□ -2.3
SEC10	YLR166C	PXA1	P41909	870 aa		0.7	□□□□□ -2.3
SEC10	YLR166C	FMP42	Q04991	504 aa		0.7	□□□□□ -2.3
SEC10	YLR166C	YLR281C	Q05863	155 aa		0.7	□□□□□ -2.3
SEC10	YLR166C	TLG2	Q08144	397 aa		0.7	□□□□□ -2.3
SEC10	YLR166C	CNA1	P23287	553 aa		0.69	□□□□□ -2.3
SEC10	YLR166C	LDB16	P25587	256 aa		0.69	□□□□□ -2.3
SEC10	YLR166C	YKU70	P32807	602 aa		0.69	□□□□□ -2.3
SEC10	YLR166C	BZZ1	P38822	633 aa		0.69	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms