RNA–Protein interactions for RNA: YJL036W

SNX4, Transcript of Sorting nexin, yeastyeast

Gene SNX4, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX4YJL036W YEL076C-AP0CX16 216 aa3.98□□□□□ -1.77
SNX4YJL036W YLR464WP0CX17 216 aa3.98□□□□□ -1.77
SNX4YJL036W MVD1P32377 396 aaKnown RBP3.98□□□□□ -1.77
SNX4YJL036W TAF5P38129 798 aa3.98□□□□□ -1.77
SNX4YJL036W FMO1P38866 432 aa3.98□□□□□ -1.77
SNX4YJL036W NUP60P39705 539 aa3.98□□□□□ -1.77
SNX4YJL036W PAC2P39937 518 aa3.98□□□□□ -1.77
SNX4YJL036W YEL076CP39971 216 aa3.98□□□□□ -1.77
SNX4YJL036W SCS2P40075 244 aaKnown RBP3.98□□□□□ -1.77
SNX4YJL036W IES1P43579 692 aa3.98□□□□□ -1.77
SNX4YJL036W IRC5P43610 853 aa3.98□□□□□ -1.77
SNX4YJL036W MAD3P47074 515 aa3.98□□□□□ -1.77
SNX4YJL036W MTL1P53214 551 aa3.98□□□□□ -1.77
SNX4YJL036W ESF2P53743 316 aaKnown RBP3.98□□□□□ -1.77
SNX4YJL036W TRS130Q03660 1102 aa3.98□□□□□ -1.77
SNX4YJL036W CIA1Q05583 330 aa3.98□□□□□ -1.77
SNX4YJL036W YPS7Q06325 596 aa3.98□□□□□ -1.77
SNX4YJL036W OPY2Q06810 360 aa3.98□□□□□ -1.77
SNX4YJL036W VAS1P07806 1104 aaKnown RBP3.97□□□□□ -1.77
SNX4YJL036W CBP3P21560 335 aa3.97□□□□□ -1.77
SNX4YJL036W RER1P25560 188 aa3.97□□□□□ -1.77
SNX4YJL036W APL2P36000 726 aaPredicted RBP3.97□□□□□ -1.77
SNX4YJL036W RAD26P40352 1085 aa3.97□□□□□ -1.77
SNX4YJL036W TMA108P40462 946 aa3.97□□□□□ -1.77
SNX4YJL036W SMK1P41808 388 aa3.97□□□□□ -1.77
SNX4YJL036W FHN1P53279 174 aa3.97□□□□□ -1.77
SNX4YJL036W GIR2Q03768 265 aaPredicted RBP3.97□□□□□ -1.77
SNX4YJL036W VHS3Q08438 674 aa3.97□□□□□ -1.77
SNX4YJL036W YOL087CQ99247 1116 aa3.97□□□□□ -1.77
SNX4YJL036W PHO5P00635 467 aa3.96□□□□□ -1.78
SNX4YJL036W ADH4P10127 382 aa3.96□□□□□ -1.78
SNX4YJL036W HOM2P13663 365 aaKnown RBP3.96□□□□□ -1.78
SNX4YJL036W HSC82P15108 705 aaKnown RBP3.96□□□□□ -1.78
SNX4YJL036W ACO1P19414 778 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
SNX4YJL036W VPS34P22543 875 aa3.96□□□□□ -1.78
SNX4YJL036W MF(ALPHA)2P32435 120 aa3.96□□□□□ -1.78
SNX4YJL036W JNM1P36224 373 aa3.96□□□□□ -1.78
SNX4YJL036W APT2P36973 181 aa3.96□□□□□ -1.78
SNX4YJL036W YHR033WP38690 423 aa3.96□□□□□ -1.78
SNX4YJL036W YHR112CP38716 378 aa3.96□□□□□ -1.78
SNX4YJL036W LYS9P38999 446 aa3.96□□□□□ -1.78
SNX4YJL036W SWD1P39706 426 aa3.96□□□□□ -1.78
SNX4YJL036W SPC72P39723 622 aa3.96□□□□□ -1.78
SNX4YJL036W SSP120P39931 234 aaKnown RBP3.96□□□□□ -1.78
SNX4YJL036W GAT1P43574 510 aa3.96□□□□□ -1.78
SNX4YJL036W MRK1P50873 501 aa3.96□□□□□ -1.78
SNX4YJL036W MEP3P53390 489 aa3.96□□□□□ -1.78
SNX4YJL036W ARG5,6Q01217 863 aa3.96□□□□□ -1.78
SNX4YJL036W RIM13Q03792 727 aa3.96□□□□□ -1.78
SNX4YJL036W STP4Q07351 490 aa3.96□□□□□ -1.78
SNX4YJL036W YDR056CQ12025 205 aa3.96□□□□□ -1.78
SNX4YJL036W ADE2P21264 571 aaKnown RBP3.95□□□□□ -1.78
SNX4YJL036W PET127P32606 800 aa3.95□□□□□ -1.78
SNX4YJL036W PHO11P35842 467 aa3.95□□□□□ -1.78
SNX4YJL036W PHO12P38693 467 aa3.95□□□□□ -1.78
SNX4YJL036W HRB1P38922 454 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
SNX4YJL036W IMA5P40884 581 aa3.95□□□□□ -1.78
SNX4YJL036W PUS4P48567 403 aaKnown RBP3.95□□□□□ -1.78
SNX4YJL036W COX18P53239 316 aa3.95□□□□□ -1.78
SNX4YJL036W MRPL13Q02204 264 aa3.95□□□□□ -1.78
SNX4YJL036W SEG1Q04279 960 aa3.95□□□□□ -1.78
SNX4YJL036W MCM21Q06675 368 aa3.95□□□□□ -1.78
SNX4YJL036W VPS5Q92331 675 aa3.95□□□□□ -1.78
SNX4YJL036W NUC1P08466 329 aa3.94□□□□□ -1.78
SNX4YJL036W ERG20P08524 352 aaKnown RBP3.94□□□□□ -1.78
SNX4YJL036W FRS1P15624 595 aaKnown RBP3.94□□□□□ -1.78
SNX4YJL036W XRS2P33301 854 aa3.94□□□□□ -1.78
SNX4YJL036W SLC1P33333 303 aa3.94□□□□□ -1.78
SNX4YJL036W RRN3P36070 627 aa3.94□□□□□ -1.78
SNX4YJL036W KAP123P40069 1113 aaKnown RBP3.94□□□□□ -1.78
SNX4YJL036W NDE1P40215 560 aa3.94□□□□□ -1.78
SNX4YJL036W FAF1P40546 346 aaPredicted RBP3.94□□□□□ -1.78
SNX4YJL036W PXA1P41909 870 aa3.94□□□□□ -1.78
SNX4YJL036W TAF4P50105 388 aa3.94□□□□□ -1.78
SNX4YJL036W MNT2P53059 558 aa3.94□□□□□ -1.78
SNX4YJL036W ARC35P53731 342 aaKnown RBP3.94□□□□□ -1.78
SNX4YJL036W SQS1P53866 767 aaKnown RBP3.94□□□□□ -1.78
SNX4YJL036W MDG1P53885 366 aa3.94□□□□□ -1.78
SNX4YJL036W REC102Q02721 264 aa3.94□□□□□ -1.78
SNX4YJL036W RCR2Q03446 210 aaKnown RBP3.94□□□□□ -1.78
SNX4YJL036W PPN1Q04119 674 aa3.94□□□□□ -1.78
SNX4YJL036W VBA4Q04602 768 aaKnown RBP3.94□□□□□ -1.78
SNX4YJL036W TSR2Q06672 205 aaKnown RBP3.94□□□□□ -1.78
SNX4YJL036W RTK1Q12100 620 aaPredicted RBP3.94□□□□□ -1.78
SNX4YJL036W CLF1Q12309 687 aaPredicted RBP3.94□□□□□ -1.78
SNX4YJL036W DBP10Q12389 995 aaKnown RBP3.94□□□□□ -1.78
SNX4YJL036W RTP1Q12751 981 aa3.94□□□□□ -1.78
SNX4YJL036W POL3P15436 1097 aa3.93□□□□□ -1.78
SNX4YJL036W IME1P21190 360 aa3.93□□□□□ -1.78
SNX4YJL036W YCL049CP25577 312 aa3.93□□□□□ -1.78
SNX4YJL036W RPT3P33298 428 aaKnown RBP3.93□□□□□ -1.78
SNX4YJL036W PUG1P40100 303 aa3.93□□□□□ -1.78
SNX4YJL036W MAD2P40958 196 aa3.93□□□□□ -1.78
SNX4YJL036W SCS3P53012 380 aa3.93□□□□□ -1.78
SNX4YJL036W CPR6P53691 371 aaKnown RBP3.93□□□□□ -1.78
SNX4YJL036W NSE5Q03718 556 aa3.93□□□□□ -1.78
SNX4YJL036W SLK19Q08581 821 aaKnown RBP3.93□□□□□ -1.78
SNX4YJL036W MLH3Q12083 715 aa3.93□□□□□ -1.78
SNX4YJL036W HOS1Q12214 470 aa3.93□□□□□ -1.78
SNX4YJL036W ZRT2Q12436 422 aa3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 90.6 ms