RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C TED1P40533 473 aa3.22□□□□□ -1.89
RPN1YHR027C USE1P53146 245 aa3.22□□□□□ -1.89
RPN1YHR027C UTP8P53276 713 aaKnown RBP3.22□□□□□ -1.89
RPN1YHR027C MRPL50P53724 139 aa3.22□□□□□ -1.89
RPN1YHR027C SDH1Q00711 640 aa3.22□□□□□ -1.89
RPN1YHR027C NSE5Q03718 556 aa3.22□□□□□ -1.89
RPN1YHR027C RRP17Q04031 235 aaPredicted RBP3.22□□□□□ -1.89
RPN1YHR027C URC2Q04411 772 aa3.22□□□□□ -1.89
RPN1YHR027C YPR196WQ06595 470 aa3.22□□□□□ -1.89
RPN1YHR027C YLL007CQ07799 665 aa3.22□□□□□ -1.89
RPN1YHR027C THP3Q12049 470 aaKnown RBP3.22□□□□□ -1.89
RPN1YHR027C DAS2Q12084 232 aa3.22□□□□□ -1.89
RPN1YHR027C RRP36Q12481 300 aaPredicted RBP3.22□□□□□ -1.89
RPN1YHR027C SET6Q12529 373 aa3.22□□□□□ -1.89
RPN1YHR027C RAD61Q99359 647 aa3.22□□□□□ -1.89
RPN1YHR027C VCX1Q99385 411 aa3.22□□□□□ -1.89
RPN1YHR027C PBS2P08018 668 aa3.22□□□□□ -1.89
RPN1YHR027C STI1P15705 589 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
RPN1YHR027C SFL1P20134 766 aa3.22□□□□□ -1.89
RPN1YHR027C PWP2P25635 923 aaKnown RBP3.22□□□□□ -1.89
RPN1YHR027C COQ8P27697 501 aa3.22□□□□□ -1.89
RPN1YHR027C GRX4P32642 244 aa3.22□□□□□ -1.89
RPN1YHR027C BCH2P36122 765 aa3.22□□□□□ -1.89
RPN1YHR027C KAP104P38217 918 aaKnown RBP3.22□□□□□ -1.89
RPN1YHR027C TIF5P38431 405 aaKnown RBP3.22□□□□□ -1.89
RPN1YHR027C SET5P38890 526 aaKnown RBP3.22□□□□□ -1.89
RPN1YHR027C MSS4P38994 779 aa3.22□□□□□ -1.89
RPN1YHR027C VMA7P39111 118 aa3.22□□□□□ -1.89
RPN1YHR027C FMP10P40098 244 aa3.22□□□□□ -1.89
RPN1YHR027C INP51P40559 946 aaKnown RBP3.22□□□□□ -1.89
RPN1YHR027C TAF6P53040 516 aa3.22□□□□□ -1.89
RPN1YHR027C UME1Q03010 460 aa3.22□□□□□ -1.89
RPN1YHR027C RPN4Q03465 531 aa3.22□□□□□ -1.89
RPN1YHR027C CLU1Q03690 1277 aaKnown RBP3.22□□□□□ -1.89
RPN1YHR027C DBP9Q06218 594 aaKnown RBP3.22□□□□□ -1.89
RPN1YHR027C VHS3Q08438 674 aa3.22□□□□□ -1.89
RPN1YHR027C RTR2Q12378 196 aa3.22□□□□□ -1.89
RPN1YHR027C FMP16Q12497 93 aa3.22□□□□□ -1.89
RPN1YHR027C APM4Q99186 491 aa3.22□□□□□ -1.89
RPN1YHR027C YRF1-1P0CX20 1796 aa3.22□□□□□ -1.89
RPN1YHR027C YRF1-5P0CX21 1796 aa3.22□□□□□ -1.89
RPN1YHR027C YRF1-8P0CX22 1796 aa3.22□□□□□ -1.89
RPN1YHR027C RPL6BP05739 176 aaKnown RBP3.21□□□□□ -1.89
RPN1YHR027C MRP13P12686 339 aa3.21□□□□□ -1.89
RPN1YHR027C MRM1P25270 412 aa3.21□□□□□ -1.89
RPN1YHR027C IMP3P32899 183 aaPredicted RBP3.21□□□□□ -1.89
RPN1YHR027C TAF14P35189 244 aa3.21□□□□□ -1.89
RPN1YHR027C SLM4P38247 162 aa3.21□□□□□ -1.89
RPN1YHR027C RIM11P38615 370 aa3.21□□□□□ -1.89
RPN1YHR027C GOS1P38736 223 aa3.21□□□□□ -1.89
RPN1YHR027C OCA5P38738 679 aa3.21□□□□□ -1.89
RPN1YHR027C SBE22P38814 852 aa3.21□□□□□ -1.89
RPN1YHR027C SEC31P38968 1273 aaKnown RBP3.21□□□□□ -1.89
RPN1YHR027C RCY1P39531 840 aa3.21□□□□□ -1.89
RPN1YHR027C MXR1P40029 184 aa3.21□□□□□ -1.89
RPN1YHR027C RTT105P40063 208 aa3.21□□□□□ -1.89
RPN1YHR027C ATG32P40458 529 aa3.21□□□□□ -1.89
RPN1YHR027C AGE2P40529 298 aa3.21□□□□□ -1.89
RPN1YHR027C FET5P43561 622 aa3.21□□□□□ -1.89
RPN1YHR027C CNN1P43618 361 aa3.21□□□□□ -1.89
RPN1YHR027C TIM54P47045 478 aa3.21□□□□□ -1.89
RPN1YHR027C YKE2P52553 114 aa3.21□□□□□ -1.89
RPN1YHR027C CUE3P53137 624 aaKnown RBP3.21□□□□□ -1.89
RPN1YHR027C YGL108CP53139 140 aa3.21□□□□□ -1.89
RPN1YHR027C YGR067CP53243 804 aa3.21□□□□□ -1.89
RPN1YHR027C TBF1Q02457 562 aa3.21□□□□□ -1.89
RPN1YHR027C FMN1Q03778 218 aa3.21□□□□□ -1.89
RPN1YHR027C SPO20Q04359 397 aa3.21□□□□□ -1.89
RPN1YHR027C COQ9Q05779 260 aa3.21□□□□□ -1.89
RPN1YHR027C EAF1Q06337 982 aa3.21□□□□□ -1.89
RPN1YHR027C RAX1Q08760 435 aa3.21□□□□□ -1.89
RPN1YHR027C AI5_ALPHAQ9ZZX1 630 aa3.21□□□□□ -1.89
RPN1YHR027C ICL1P28240 557 aaPredicted RBP3.21□□□□□ -1.9
RPN1YHR027C NAT2P37293 288 aa3.21□□□□□ -1.9
RPN1YHR027C ETR1P38071 380 aa3.21□□□□□ -1.9
RPN1YHR027C YBR139WP38109 508 aa3.21□□□□□ -1.9
RPN1YHR027C KTR3P38130 404 aaPredicted RBP3.21□□□□□ -1.9
RPN1YHR027C ALG3P38179 458 aa3.21□□□□□ -1.9
RPN1YHR027C DPH1P40487 425 aaKnown RBP3.21□□□□□ -1.9
RPN1YHR027C BUD6P41697 788 aa3.21□□□□□ -1.9
RPN1YHR027C DIM1P41819 318 aaKnown RBP3.21□□□□□ -1.9
RPN1YHR027C EPL1P43572 832 aa3.21□□□□□ -1.9
RPN1YHR027C IRC5P43610 853 aa3.21□□□□□ -1.9
RPN1YHR027C BNA6P43619 295 aa3.21□□□□□ -1.9
RPN1YHR027C NUP85P46673 744 aa3.21□□□□□ -1.9
RPN1YHR027C VMA10P48836 114 aaKnown RBP3.21□□□□□ -1.9
RPN1YHR027C YGR237CP50089 785 aa3.21□□□□□ -1.9
RPN1YHR027C YGR016WP53209 190 aa3.21□□□□□ -1.9
RPN1YHR027C IMP4P53941 290 aaKnown RBP3.21□□□□□ -1.9
RPN1YHR027C FOX2Q02207 900 aaKnown RBP3.21□□□□□ -1.9
RPN1YHR027C TAF11Q04226 346 aa3.21□□□□□ -1.9
RPN1YHR027C MED2Q12124 431 aa3.21□□□□□ -1.9
RPN1YHR027C ATG34Q12292 412 aa3.21□□□□□ -1.9
RPN1YHR027C NTO1Q12311 748 aa3.21□□□□□ -1.9
RPN1YHR027C YBR298C-AQ8TGK4 73 aa3.21□□□□□ -1.9
RPN1YHR027C YPT6Q99260 215 aa3.21□□□□□ -1.9
RPN1YHR027C MF(ALPHA)1P01149 165 aa3.21□□□□□ -1.9
RPN1YHR027C HXK1P04806 485 aaKnown RBP3.21□□□□□ -1.9
RPN1YHR027C GAL3P13045 520 aa3.21□□□□□ -1.9
RPN1YHR027C CKA2P19454 339 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 392.2 ms