RNA–Protein interactions for RNA: YGL007W

BRP1, Transcript of Dubious ORF located in the upstream region of PMA1, yeastyeast

Gene BRP1, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRP1YGL007W UME1Q03010 460 aa2.4□□□□□ -2.03
BRP1YGL007W YAP6Q03935 383 aa2.4□□□□□ -2.03
BRP1YGL007W AIM33Q04516 312 aa2.4□□□□□ -2.03
BRP1YGL007W FUS2Q05670 677 aa2.4□□□□□ -2.03
BRP1YGL007W COQ9Q05779 260 aa2.4□□□□□ -2.03
BRP1YGL007W SMD2Q06217 110 aaKnown RBP2.4□□□□□ -2.03
BRP1YGL007W CRD1Q07560 283 aa2.4□□□□□ -2.03
BRP1YGL007W YLR001CQ07895 862 aa2.4□□□□□ -2.03
BRP1YGL007W DCS2Q12123 353 aa2.4□□□□□ -2.03
BRP1YGL007W MDM12Q92328 271 aa2.4□□□□□ -2.03
BRP1YGL007W MPD2Q99316 277 aa2.4□□□□□ -2.03
BRP1YGL007W SCP160P06105 1222 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
BRP1YGL007W TOM70P07213 617 aaKnown RBP2.39□□□□□ -2.03
BRP1YGL007W KAR1P11927 433 aa2.39□□□□□ -2.03
BRP1YGL007W CLN3P13365 580 aa2.39□□□□□ -2.03
BRP1YGL007W MSD1P15179 658 aaKnown RBP2.39□□□□□ -2.03
BRP1YGL007W POL3P15436 1097 aa2.39□□□□□ -2.03
BRP1YGL007W THR4P16120 514 aaKnown RBP2.39□□□□□ -2.03
BRP1YGL007W DBP5P20449 482 aaKnown RBP2.39□□□□□ -2.03
BRP1YGL007W RPA135P22138 1203 aaKnown RBP2.39□□□□□ -2.03
BRP1YGL007W YKL107WP34251 309 aa2.39□□□□□ -2.03
BRP1YGL007W FUI1P38196 639 aa2.39□□□□□ -2.03
BRP1YGL007W RFS1P38234 210 aaKnown RBP2.39□□□□□ -2.03
BRP1YGL007W YHL017WP38745 532 aa2.39□□□□□ -2.03
BRP1YGL007W YAP1801P38856 637 aa2.39□□□□□ -2.03
BRP1YGL007W SAH1P39954 449 aaKnown RBP2.39□□□□□ -2.03
BRP1YGL007W FMP10P40098 244 aa2.39□□□□□ -2.03
BRP1YGL007W UBP6P43593 499 aaKnown RBP2.39□□□□□ -2.03
BRP1YGL007W CNN1P43618 361 aa2.39□□□□□ -2.03
BRP1YGL007W TY4A-JP47023 414 aa2.39□□□□□ -2.03
BRP1YGL007W PMT3P47190 753 aa2.39□□□□□ -2.03
BRP1YGL007W PSP2P50109 593 aaKnown RBP2.39□□□□□ -2.03
BRP1YGL007W YKE2P52553 114 aa2.39□□□□□ -2.03
BRP1YGL007W GTF1P53260 183 aaPredicted RBP2.39□□□□□ -2.03
BRP1YGL007W CNM67P53865 581 aaKnown RBP2.39□□□□□ -2.03
BRP1YGL007W ARP5P53946 755 aa2.39□□□□□ -2.03
BRP1YGL007W COG6P53959 839 aa2.39□□□□□ -2.03
BRP1YGL007W YNL034WP53963 612 aa2.39□□□□□ -2.03
BRP1YGL007W YNL018CP53976 612 aa2.39□□□□□ -2.03
BRP1YGL007W MFM1Q02783 413 aa2.39□□□□□ -2.03
BRP1YGL007W LGE1Q02796 332 aaKnown RBP2.39□□□□□ -2.03
BRP1YGL007W RKM2Q03942 479 aa2.39□□□□□ -2.03
BRP1YGL007W CSM3Q04659 317 aa2.39□□□□□ -2.03
BRP1YGL007W SLK19Q08581 821 aaKnown RBP2.39□□□□□ -2.03
BRP1YGL007W VTS1Q08831 523 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
BRP1YGL007W YPL150WQ12152 901 aa2.39□□□□□ -2.03
BRP1YGL007W FOB1O13329 566 aa2.38□□□□□ -2.03
BRP1YGL007W ILV1P00927 576 aaKnown RBP2.38□□□□□ -2.03
BRP1YGL007W YEL076C-AP0CX16 216 aa2.38□□□□□ -2.03
BRP1YGL007W YLR464WP0CX17 216 aa2.38□□□□□ -2.03
BRP1YGL007W YER152CP10356 443 aa2.38□□□□□ -2.03
BRP1YGL007W EMC1P25574 760 aa2.38□□□□□ -2.03
BRP1YGL007W CDC48P25694 835 aaKnown RBP2.38□□□□□ -2.03
BRP1YGL007W URK1P27515 501 aa2.38□□□□□ -2.03
BRP1YGL007W AAR2P32357 355 aaPredicted RBP2.38□□□□□ -2.03
BRP1YGL007W TMT1P32643 299 aa2.38□□□□□ -2.03
BRP1YGL007W SAS3P34218 831 aa2.38□□□□□ -2.03
BRP1YGL007W YKL151CP36059 337 aa2.38□□□□□ -2.03
BRP1YGL007W ALG3P38179 458 aa2.38□□□□□ -2.03
BRP1YGL007W YBR071WP38243 211 aa2.38□□□□□ -2.03
BRP1YGL007W ECM29P38737 1868 aa2.38□□□□□ -2.03
BRP1YGL007W YHL026CP38740 315 aa2.38□□□□□ -2.03
BRP1YGL007W YEL076CP39971 216 aa2.38□□□□□ -2.03
BRP1YGL007W ULP2P40537 1034 aaPredicted RBP2.38□□□□□ -2.03
BRP1YGL007W THI6P41835 540 aa2.38□□□□□ -2.03
BRP1YGL007W KRI1P42846 591 aaKnown RBP2.38□□□□□ -2.03
BRP1YGL007W YFL052WP43551 465 aa2.38□□□□□ -2.03
BRP1YGL007W YGR153WP48238 217 aa2.38□□□□□ -2.03
BRP1YGL007W GCV2P49095 1034 aa2.38□□□□□ -2.03
BRP1YGL007W CTF18P49956 741 aa2.38□□□□□ -2.03
BRP1YGL007W CAF130P53280 1122 aaPredicted RBP2.38□□□□□ -2.03
BRP1YGL007W SDA1P53313 767 aaKnown RBP2.38□□□□□ -2.03
BRP1YGL007W ARK1P53974 638 aa2.38□□□□□ -2.03
BRP1YGL007W PNG1Q02890 363 aa2.38□□□□□ -2.03
BRP1YGL007W SVL3Q03088 825 aaKnown RBP2.38□□□□□ -2.03
BRP1YGL007W SKY1Q03656 742 aa2.38□□□□□ -2.03
BRP1YGL007W MTQ2Q03920 221 aaPredicted RBP2.38□□□□□ -2.03
BRP1YGL007W YLR455WQ06188 304 aa2.38□□□□□ -2.03
BRP1YGL007W PSK2Q08217 1101 aa2.38□□□□□ -2.03
BRP1YGL007W FAP7Q12055 197 aaPredicted RBP2.38□□□□□ -2.03
BRP1YGL007W DAP1Q12091 152 aa2.38□□□□□ -2.03
BRP1YGL007W GET3Q12154 354 aaKnown RBP2.38□□□□□ -2.03
BRP1YGL007W PTC5Q12511 572 aa2.38□□□□□ -2.03
BRP1YGL007W PCD1Q12524 340 aa2.38□□□□□ -2.03
BRP1YGL007W TMA7Q3E764 64 aaKnown RBP2.38□□□□□ -2.03
BRP1YGL007W MYO1P08964 1928 aa2.37□□□□□ -2.03
BRP1YGL007W FAB1P34756 2278 aa2.37□□□□□ -2.03
BRP1YGL007W HSP82P02829 709 aaKnown RBP2.37□□□□□ -2.03
BRP1YGL007W COX4P04037 155 aa2.37□□□□□ -2.03
BRP1YGL007W SRD1P09007 221 aa2.37□□□□□ -2.03
BRP1YGL007W RNR2P09938 399 aaKnown RBP2.37□□□□□ -2.03
BRP1YGL007W RPL19AP0CX82 189 aaKnown RBP2.37□□□□□ -2.03
BRP1YGL007W RPL19BP0CX83 189 aaPredicted RBP2.37□□□□□ -2.03
BRP1YGL007W WHI2P12611 486 aa2.37□□□□□ -2.03
BRP1YGL007W TCP1P12612 559 aaKnown RBP2.37□□□□□ -2.03
BRP1YGL007W ALG1P16661 449 aa2.37□□□□□ -2.03
BRP1YGL007W SNF5P18480 905 aa2.37□□□□□ -2.03
BRP1YGL007W PRP9P19736 530 aaKnown RBP2.37□□□□□ -2.03
BRP1YGL007W ADE2P21264 571 aaKnown RBP2.37□□□□□ -2.03
BRP1YGL007W ISY1P21374 235 aaPredicted RBP2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 63.9 ms