RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C NSE5Q03718 556 aa2.78□□□□□ -1.96
PRE4YFR050C YLR456WQ06199 204 aa2.78□□□□□ -1.96
PRE4YFR050C MRI1Q06489 411 aaKnown RBP2.78□□□□□ -1.96
PRE4YFR050C CIT1P00890 479 aa2.77□□□□□ -1.97
PRE4YFR050C TOM70P07213 617 aaKnown RBP2.77□□□□□ -1.97
PRE4YFR050C SIR1P21691 654 aa2.77□□□□□ -1.97
PRE4YFR050C SED4P25365 1065 aa2.77□□□□□ -1.97
PRE4YFR050C PTK1P36002 662 aaPredicted RBP2.77□□□□□ -1.97
PRE4YFR050C CEP3P40969 608 aa2.77□□□□□ -1.97
PRE4YFR050C NIT3P49954 291 aa2.77□□□□□ -1.97
PRE4YFR050C HUL5P53119 910 aa2.77□□□□□ -1.97
PRE4YFR050C PUS2P53167 370 aa2.77□□□□□ -1.97
PRE4YFR050C MUK1Q02866 612 aa2.77□□□□□ -1.97
PRE4YFR050C FLC1Q08967 793 aa2.77□□□□□ -1.97
PRE4YFR050C NPC2Q12408 173 aa2.77□□□□□ -1.97
PRE4YFR050C HBN1Q96VH4 193 aa2.77□□□□□ -1.97
PRE4YFR050C SAC3P46674 1301 aa2.76□□□□□ -1.97
PRE4YFR050C GAL11P19659 1081 aa2.76□□□□□ -1.97
PRE4YFR050C AFR1P33304 620 aa2.76□□□□□ -1.97
PRE4YFR050C STE13P33894 931 aa2.76□□□□□ -1.97
PRE4YFR050C MCR1P36060 302 aaKnown RBP2.76□□□□□ -1.97
PRE4YFR050C PET10P36139 283 aa2.76□□□□□ -1.97
PRE4YFR050C BIR1P47134 954 aa2.76□□□□□ -1.97
PRE4YFR050C JSN1P47135 1091 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
PRE4YFR050C NMA2P53204 395 aa2.76□□□□□ -1.97
PRE4YFR050C FMP45Q07651 309 aa2.76□□□□□ -1.97
PRE4YFR050C MPH2P0CD99 609 aa2.75□□□□□ -1.97
PRE4YFR050C STI1P15705 589 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
PRE4YFR050C KIN82P25341 720 aa2.75□□□□□ -1.97
PRE4YFR050C URA1P28272 314 aaPredicted RBP2.75□□□□□ -1.97
PRE4YFR050C RPD3P32561 433 aa2.75□□□□□ -1.97
PRE4YFR050C TYE7P33122 291 aaPredicted RBP2.75□□□□□ -1.97
PRE4YFR050C TRM2P33753 639 aa2.75□□□□□ -1.97
PRE4YFR050C PHO88P38264 188 aaPredicted RBP2.75□□□□□ -1.97
PRE4YFR050C GGA2P38817 585 aaKnown RBP2.75□□□□□ -1.97
PRE4YFR050C YIL108WP40483 696 aaKnown RBP2.75□□□□□ -1.97
PRE4YFR050C YIR042CP40586 236 aa2.75□□□□□ -1.97
PRE4YFR050C GYP8P43570 497 aa2.75□□□□□ -1.97
PRE4YFR050C CHA4P43634 648 aa2.75□□□□□ -1.97
PRE4YFR050C YKE2P52553 114 aa2.75□□□□□ -1.97
PRE4YFR050C YGL260WP53056 76 aa2.75□□□□□ -1.97
PRE4YFR050C YGL036WP53185 909 aaPredicted RBP2.75□□□□□ -1.97
PRE4YFR050C HEF3P53978 1044 aaKnown RBP2.75□□□□□ -1.97
PRE4YFR050C NSE3Q05541 303 aa2.75□□□□□ -1.97
PRE4YFR050C SPH1Q06160 661 aa2.75□□□□□ -1.97
PRE4YFR050C KCS1Q12494 1050 aa2.75□□□□□ -1.97
PRE4YFR050C YOL098CQ12496 1037 aa2.75□□□□□ -1.97
PRE4YFR050C TOP3P13099 656 aa2.74□□□□□ -1.97
PRE4YFR050C YKL091CP33324 310 aaKnown RBP2.74□□□□□ -1.97
PRE4YFR050C UBS1P38290 277 aa2.74□□□□□ -1.97
PRE4YFR050C YHR020WP38708 688 aaKnown RBP2.74□□□□□ -1.97
PRE4YFR050C YHR202WP38887 602 aa2.74□□□□□ -1.97
PRE4YFR050C RSP5P39940 809 aaKnown RBP2.74□□□□□ -1.97
PRE4YFR050C URM1P40554 99 aaPredicted RBP2.74□□□□□ -1.97
PRE4YFR050C UBP6P43593 499 aaKnown RBP2.74□□□□□ -1.97
PRE4YFR050C MDM1Q01846 1127 aa2.74□□□□□ -1.97
PRE4YFR050C GSF2Q04697 403 aaKnown RBP2.74□□□□□ -1.97
PRE4YFR050C MSL5Q12186 476 aaKnown RBP RIP-Chip data2.74□□□□□ -1.97not detected
PRE4YFR050C DAL82P21705 255 aa2.73□□□□□ -1.97
PRE4YFR050C PMI40P29952 429 aaKnown RBP2.73□□□□□ -1.97
PRE4YFR050C DCG1P32460 244 aa2.73□□□□□ -1.97
PRE4YFR050C PCM1P38628 557 aaKnown RBP2.73□□□□□ -1.97
PRE4YFR050C RMD8P43620 662 aa2.73□□□□□ -1.97
PRE4YFR050C ALG2P43636 503 aa2.73□□□□□ -1.97
PRE4YFR050C PHO23P50947 330 aa2.73□□□□□ -1.97
PRE4YFR050C SOL4P53315 255 aa2.73□□□□□ -1.97
PRE4YFR050C YKR011CQ02209 353 aa2.73□□□□□ -1.97
PRE4YFR050C AIM39Q08223 395 aa2.73□□□□□ -1.97
PRE4YFR050C KEL3Q08979 651 aaPredicted RBP2.73□□□□□ -1.97
PRE4YFR050C ENV7Q12003 364 aa2.73□□□□□ -1.97
PRE4YFR050C UPC2Q12151 913 aa2.73□□□□□ -1.97
PRE4YFR050C NTO1Q12311 748 aa2.73□□□□□ -1.97
PRE4YFR050C DAL7P21826 554 aa2.72□□□□□ -1.97
PRE4YFR050C KAR4P25583 335 aa2.72□□□□□ -1.97
PRE4YFR050C CYS3P31373 394 aaKnown RBP2.72□□□□□ -1.97
PRE4YFR050C MSS51P32335 436 aa2.72□□□□□ -1.97
PRE4YFR050C UBP12P39538 1254 aa2.72□□□□□ -1.97
PRE4YFR050C ERV46P39727 415 aa2.72□□□□□ -1.97
PRE4YFR050C LTP1P40347 161 aa2.72□□□□□ -1.97
PRE4YFR050C ESL1P40456 1118 aa2.72□□□□□ -1.97
PRE4YFR050C GAT1P43574 510 aa2.72□□□□□ -1.97
PRE4YFR050C MSE1P48525 536 aa2.72□□□□□ -1.97
PRE4YFR050C EXG2P52911 562 aa2.72□□□□□ -1.97
PRE4YFR050C LIF1P53150 421 aa2.72□□□□□ -1.97
PRE4YFR050C DAM1P53267 343 aa2.72□□□□□ -1.97
PRE4YFR050C NOG2P53742 486 aaKnown RBP2.72□□□□□ -1.97
PRE4YFR050C YDR514CQ04408 483 aa2.72□□□□□ -1.97
PRE4YFR050C VIP1Q06685 1146 aaKnown RBP2.72□□□□□ -1.97
PRE4YFR050C ENB1Q08299 606 aa2.72□□□□□ -1.97
PRE4YFR050C GUP2Q08929 609 aa2.72□□□□□ -1.97
PRE4YFR050C SWM1Q12379 170 aa2.72□□□□□ -1.97
PRE4YFR050C RPL1AP0CX43 217 aaKnown RBP2.71□□□□□ -1.98
PRE4YFR050C RPL1BP0CX44 217 aaKnown RBP2.71□□□□□ -1.98
PRE4YFR050C ATG15P25641 520 aa2.71□□□□□ -1.98
PRE4YFR050C GAC1P28006 793 aa2.71□□□□□ -1.98
PRE4YFR050C EMC3P36039 253 aa2.71□□□□□ -1.98
PRE4YFR050C BET3P36149 193 aa2.71□□□□□ -1.98
PRE4YFR050C CCL1P37366 393 aa2.71□□□□□ -1.98
PRE4YFR050C YHR078WP38799 552 aa2.71□□□□□ -1.98
PRE4YFR050C SDP1P40479 209 aa2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms