RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeastyeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC4YFL009W TY1A-PLP0CX73 440 aa5.18□□□□□ -1.58
CDC4YFL009W TY1A-JR1P0CX74 440 aa5.18□□□□□ -1.58
CDC4YFL009W TY1A-LR3P0CX75 440 aa5.18□□□□□ -1.58
CDC4YFL009W TY1A-ML2P0CX76 440 aa5.18□□□□□ -1.58
CDC4YFL009W CLN3P13365 580 aa5.18□□□□□ -1.58
CDC4YFL009W UBA1P22515 1024 aaKnown RBP5.18□□□□□ -1.58
CDC4YFL009W HCS1P34243 683 aa5.18□□□□□ -1.58
CDC4YFL009W EXO5P38289 585 aa5.18□□□□□ -1.58
CDC4YFL009W ERG7P38604 731 aa5.18□□□□□ -1.58
CDC4YFL009W OSH7P38755 437 aa5.18□□□□□ -1.58
CDC4YFL009W GGA2P38817 585 aaKnown RBP5.18□□□□□ -1.58
CDC4YFL009W PCI8P40512 444 aa5.18□□□□□ -1.58
CDC4YFL009W VMA10P48836 114 aaKnown RBP5.18□□□□□ -1.58
CDC4YFL009W GCV2P49095 1034 aa5.18□□□□□ -1.58
CDC4YFL009W KAP114P53067 1004 aa5.18□□□□□ -1.58
CDC4YFL009W LGE1Q02796 332 aaKnown RBP5.18□□□□□ -1.58
CDC4YFL009W SYO1Q07395 620 aa5.18□□□□□ -1.58
CDC4YFL009W YDL114WQ07530 308 aa5.18□□□□□ -1.58
CDC4YFL009W TY1A-GR1Q12085 440 aa5.18□□□□□ -1.58
CDC4YFL009W BBP1Q12365 385 aa5.18□□□□□ -1.58
CDC4YFL009W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.18□□□□□ -1.58
CDC4YFL009W TY1A-OLQ92392 440 aaKnown RBP5.18□□□□□ -1.58
CDC4YFL009W ADR1P07248 1323 aa5.18□□□□□ -1.58
CDC4YFL009W FKS3Q04952 1785 aa5.17□□□□□ -1.58
CDC4YFL009W NUC1P08466 329 aa5.17□□□□□ -1.58
CDC4YFL009W SEC6P32844 805 aa5.17□□□□□ -1.58
CDC4YFL009W INP51P40559 946 aaKnown RBP5.17□□□□□ -1.58
CDC4YFL009W ALB1P47019 175 aaPredicted RBP5.17□□□□□ -1.58
CDC4YFL009W YJL055WP47044 245 aa5.17□□□□□ -1.58
CDC4YFL009W BIO5P53744 561 aaKnown RBP5.17□□□□□ -1.58
CDC4YFL009W PGA2P53903 129 aa5.17□□□□□ -1.58
CDC4YFL009W FIN1Q03898 291 aa5.17□□□□□ -1.58
CDC4YFL009W SEC10Q06245 871 aa5.17□□□□□ -1.58
CDC4YFL009W TFC6Q06339 672 aa5.17□□□□□ -1.58
CDC4YFL009W MRL1Q06815 381 aa5.17□□□□□ -1.58
CDC4YFL009W MLH2Q07980 695 aa5.17□□□□□ -1.58
CDC4YFL009W FAP7Q12055 197 aaPredicted RBP5.17□□□□□ -1.58
CDC4YFL009W SLM3Q12093 417 aa5.17□□□□□ -1.58
CDC4YFL009W TY1A-BLQ12266 440 aa5.17□□□□□ -1.58
CDC4YFL009W MDM20Q12387 796 aaKnown RBP5.17□□□□□ -1.58
CDC4YFL009W CHO2P05374 869 aaKnown RBP5.17□□□□□ -1.58
CDC4YFL009W COQ1P18900 473 aa5.17□□□□□ -1.58
CDC4YFL009W FRD1P32614 470 aaKnown RBP5.17□□□□□ -1.58
CDC4YFL009W MRE11P32829 692 aa5.17□□□□□ -1.58
CDC4YFL009W XRS2P33301 854 aa5.17□□□□□ -1.58
CDC4YFL009W YKL222CP35995 705 aa5.17□□□□□ -1.58
CDC4YFL009W MRX3P38172 270 aa5.17□□□□□ -1.58
CDC4YFL009W RXT2P38255 430 aa5.17□□□□□ -1.58
CDC4YFL009W SER3P40054 469 aa5.17□□□□□ -1.58
CDC4YFL009W PHB1P40961 287 aa5.17□□□□□ -1.58
CDC4YFL009W GCD14P46959 383 aaPredicted RBP5.17□□□□□ -1.58
CDC4YFL009W PRP42Q03776 544 aaKnown RBP5.17□□□□□ -1.58
CDC4YFL009W UTP14Q04500 899 aaKnown RBP5.17□□□□□ -1.58
CDC4YFL009W YIG1Q08956 461 aa5.17□□□□□ -1.58
CDC4YFL009W OM45P16547 393 aa5.16□□□□□ -1.58
CDC4YFL009W ALG1P16661 449 aa5.16□□□□□ -1.58
CDC4YFL009W MSM1P22438 575 aa5.16□□□□□ -1.58
CDC4YFL009W ADY2P25613 283 aa5.16□□□□□ -1.58
CDC4YFL009W MSH2P25847 964 aa5.16□□□□□ -1.58
CDC4YFL009W UBP13P38187 747 aa5.16□□□□□ -1.58
CDC4YFL009W YHL012WP38709 493 aa5.16□□□□□ -1.58
CDC4YFL009W STN1P38960 494 aa5.16□□□□□ -1.58
CDC4YFL009W MPT5P39016 859 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
CDC4YFL009W SNL1P40548 159 aa5.16□□□□□ -1.58
CDC4YFL009W TYW3P53177 273 aa5.16□□□□□ -1.58
CDC4YFL009W YNR065CP53751 1116 aa5.16□□□□□ -1.58
CDC4YFL009W RPL22BP56628 122 aaKnown RBP5.16□□□□□ -1.58
CDC4YFL009W SSQ1Q05931 657 aaPredicted RBP5.16□□□□□ -1.58
CDC4YFL009W TDA5Q06417 326 aaKnown RBP5.16□□□□□ -1.58
CDC4YFL009W MCP2Q06567 569 aa5.16□□□□□ -1.58
CDC4YFL009W RRI2Q12348 645 aa5.16□□□□□ -1.58
CDC4YFL009W TRP2P00899 507 aaKnown RBP5.15□□□□□ -1.58
CDC4YFL009W TSR4P25040 408 aa5.15□□□□□ -1.58
CDC4YFL009W PHO84P25297 587 aaKnown RBP5.15□□□□□ -1.58
CDC4YFL009W PUF4P25339 888 aaKnown RBP RIP-Chip data5.15□□□□□ -1.58not detected
CDC4YFL009W MRPL40P36534 297 aa5.15□□□□□ -1.58
CDC4YFL009W NCL1P38205 684 aaKnown RBP5.15□□□□□ -1.58
CDC4YFL009W VMA22P38784 181 aa5.15□□□□□ -1.58
CDC4YFL009W MMM1P41800 426 aa5.15□□□□□ -1.58
CDC4YFL009W PFD1P46988 109 aa5.15□□□□□ -1.58
CDC4YFL009W YJR124CP47159 448 aa5.15□□□□□ -1.58
CDC4YFL009W HOS2P53096 452 aaPredicted RBP5.15□□□□□ -1.58
CDC4YFL009W RIM8P53179 542 aa5.15□□□□□ -1.58
CDC4YFL009W AIM41Q12032 185 aa5.15□□□□□ -1.58
CDC4YFL009W YLR125WQ12138 136 aa5.15□□□□□ -1.58
CDC4YFL009W NOT5Q12514 560 aaPredicted RBP5.15□□□□□ -1.58
CDC4YFL009W CDC31P06704 161 aaKnown RBP5.15□□□□□ -1.59
CDC4YFL009W YAK1P14680 807 aa5.15□□□□□ -1.59
CDC4YFL009W RPC53P25441 422 aa5.15□□□□□ -1.59
CDC4YFL009W MGM1P32266 881 aa5.15□□□□□ -1.59
CDC4YFL009W TIM23P32897 222 aa5.15□□□□□ -1.59
CDC4YFL009W SER33P40510 469 aa5.15□□□□□ -1.59
CDC4YFL009W DIM1P41819 318 aaKnown RBP5.15□□□□□ -1.59
CDC4YFL009W TRF5P48561 642 aaKnown RBP5.15□□□□□ -1.59
CDC4YFL009W MIG2P53035 382 aa5.15□□□□□ -1.59
CDC4YFL009W SPC105P53148 917 aa5.15□□□□□ -1.59
CDC4YFL009W TOF1P53840 1238 aa5.15□□□□□ -1.59
CDC4YFL009W RTC4P53850 401 aa5.15□□□□□ -1.59
CDC4YFL009W CNM67P53865 581 aaKnown RBP5.15□□□□□ -1.59
CDC4YFL009W UBP2Q01476 1272 aa5.15□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 98.2 ms