RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B COP1P53622 1201 aaKnown RBP1.2□□□□□ -2.22
snR39BsnR39B TRS23Q03784 219 aa1.2□□□□□ -2.22
snR39BsnR39B TPO3Q06451 622 aa1.2□□□□□ -2.22
snR39BsnR39B YFT2Q06676 274 aa1.2□□□□□ -2.22
snR39BsnR39B IZH3Q07959 543 aa1.2□□□□□ -2.22
snR39BsnR39B BI2P03873 423 aa1.19□□□□□ -2.22
snR39BsnR39B HSP60P19882 572 aaKnown RBP1.19□□□□□ -2.22
snR39BsnR39B AIM17P23180 465 aaKnown RBP1.19□□□□□ -2.22
snR39BsnR39B YCP4P25349 247 aaKnown RBP1.19□□□□□ -2.22
snR39BsnR39B FMP46P36141 133 aaKnown RBP1.19□□□□□ -2.22
snR39BsnR39B APN2P38207 520 aa1.19□□□□□ -2.22
snR39BsnR39B COS111P38308 924 aa1.19□□□□□ -2.22
snR39BsnR39B FAA2P39518 744 aa1.19□□□□□ -2.22
snR39BsnR39B EXO1P39875 702 aa1.19□□□□□ -2.22
snR39BsnR39B YNL195CP40168 261 aa1.19□□□□□ -2.22
snR39BsnR39B IRC7P43623 340 aa1.19□□□□□ -2.22
snR39BsnR39B YNL058CP53947 316 aa1.19□□□□□ -2.22
snR39BsnR39B YMR317WQ04893 1140 aa1.19□□□□□ -2.22
snR39BsnR39B RPN7Q06103 429 aaKnown RBP1.19□□□□□ -2.22
snR39BsnR39B SPN1Q06505 410 aaPredicted RBP1.19□□□□□ -2.22
snR39BsnR39B TGS1Q12052 315 aa1.19□□□□□ -2.22
snR39BsnR39B YMR085WP0CF18 432 aa1.18□□□□□ -2.22
snR39BsnR39B LSB5P25369 354 aa1.18□□□□□ -2.22
snR39BsnR39B LOT5P34234 306 aa1.18□□□□□ -2.22
snR39BsnR39B YKR018CP36114 725 aa1.18□□□□□ -2.22
snR39BsnR39B EXO84P38261 753 aa1.18□□□□□ -2.22
snR39BsnR39B SAD1P43589 448 aa1.18□□□□□ -2.22
snR39BsnR39B SET2P46995 733 aaKnown RBP1.18□□□□□ -2.22
snR39BsnR39B ZAP1P47043 880 aa1.18□□□□□ -2.22
snR39BsnR39B PCL10P53124 433 aa1.18□□□□□ -2.22
snR39BsnR39B YNL018CP53976 612 aa1.18□□□□□ -2.22
snR39BsnR39B LEE1Q02799 301 aaKnown RBP1.18□□□□□ -2.22
snR39BsnR39B YPL071CQ02864 156 aa1.18□□□□□ -2.22
snR39BsnR39B YML020WQ03722 664 aa1.18□□□□□ -2.22
snR39BsnR39B YLR281CQ05863 155 aa1.18□□□□□ -2.22
snR39BsnR39B DSE3Q08729 430 aa1.18□□□□□ -2.22
snR39BsnR39B YPL216WQ08964 1102 aa1.18□□□□□ -2.22
snR39BsnR39B ATX2Q12067 313 aa1.18□□□□□ -2.22
snR39BsnR39B YLR111WQ12528 110 aa1.18□□□□□ -2.22
snR39BsnR39B Q0142Q9ZZW4 58 aa1.18□□□□□ -2.22
snR39BsnR39B CIT2P08679 460 aa1.17□□□□□ -2.22
snR39BsnR39B MIH1P23748 554 aa1.17□□□□□ -2.22
snR39BsnR39B PRP22P24384 1145 aaKnown RBP1.17□□□□□ -2.22
snR39BsnR39B YPT7P32939 208 aa1.17□□□□□ -2.22
snR39BsnR39B BET3P36149 193 aa1.17□□□□□ -2.22
snR39BsnR39B AKL1P38080 1108 aaKnown RBP1.17□□□□□ -2.22
snR39BsnR39B DHH1P39517 506 aaKnown RBP1.17□□□□□ -2.22
snR39BsnR39B RPL15BP54780 204 aaPredicted RBP1.17□□□□□ -2.22
snR39BsnR39B ARP4P80428 489 aa1.17□□□□□ -2.22
snR39BsnR39B VTC3Q02725 835 aa1.17□□□□□ -2.22
snR39BsnR39B TAF8Q03750 510 aa1.17□□□□□ -2.22
snR39BsnR39B PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.17□□□□□ -2.22not detected
snR39BsnR39B RPS9BP05755 195 aaKnown RBP1.16□□□□□ -2.22
snR39BsnR39B COQ3P27680 312 aa1.16□□□□□ -2.22
snR39BsnR39B CNE1P27825 502 aa1.16□□□□□ -2.22
snR39BsnR39B BRN1P38170 754 aa1.16□□□□□ -2.22
snR39BsnR39B RKM3P38222 552 aa1.16□□□□□ -2.22
snR39BsnR39B TOM71P38825 639 aaKnown RBP1.16□□□□□ -2.22
snR39BsnR39B VAC8P39968 578 aa1.16□□□□□ -2.22
snR39BsnR39B YIL152WP40455 235 aa1.16□□□□□ -2.22
snR39BsnR39B TES1P41903 349 aaKnown RBP1.16□□□□□ -2.22
snR39BsnR39B YIP4P53093 235 aa1.16□□□□□ -2.22
snR39BsnR39B ALD6P54115 500 aaKnown RBP1.16□□□□□ -2.22
snR39BsnR39B GPD1Q00055 391 aaKnown RBP1.16□□□□□ -2.22
snR39BsnR39B MFM1Q02783 413 aa1.16□□□□□ -2.22
snR39BsnR39B VBA4Q04602 768 aaKnown RBP1.16□□□□□ -2.22
snR39BsnR39B CIT1P00890 479 aa1.15□□□□□ -2.23
snR39BsnR39B YCR043CP25361 127 aa1.15□□□□□ -2.23
snR39BsnR39B GRX1P25373 110 aaKnown RBP1.15□□□□□ -2.23
snR39BsnR39B PPZ1P26570 692 aa1.15□□□□□ -2.23
snR39BsnR39B PET127P32606 800 aa1.15□□□□□ -2.23
snR39BsnR39B STO1P34160 861 aaKnown RBP1.15□□□□□ -2.23
snR39BsnR39B DHR2P36009 735 aaPredicted RBP1.15□□□□□ -2.23
snR39BsnR39B SCO2P38072 301 aa1.15□□□□□ -2.23
snR39BsnR39B YIL169CP40442 995 aa1.15□□□□□ -2.23
snR39BsnR39B TDA10P42938 290 aa1.15□□□□□ -2.23
snR39BsnR39B BIT61P47041 543 aa1.15□□□□□ -2.23
snR39BsnR39B RTA1P53047 317 aa1.15□□□□□ -2.23
snR39BsnR39B JIP5Q06214 492 aaPredicted RBP1.15□□□□□ -2.23
snR39BsnR39B ISA1Q07821 250 aaPredicted RBP1.15□□□□□ -2.23
snR39BsnR39B RPT3P33298 428 aaKnown RBP1.14□□□□□ -2.23
snR39BsnR39B MCD4P36051 919 aa1.14□□□□□ -2.23
snR39BsnR39B YKR051WP36142 418 aa1.14□□□□□ -2.23
snR39BsnR39B PPE1P38796 400 aa1.14□□□□□ -2.23
snR39BsnR39B YFL015CP43578 164 aa1.14□□□□□ -2.23
snR39BsnR39B ROK1P45818 564 aaPredicted RBP1.14□□□□□ -2.23
snR39BsnR39B SHE10P53075 577 aa1.14□□□□□ -2.23
snR39BsnR39B SPO1P53541 631 aa1.14□□□□□ -2.23
snR39BsnR39B BUD17P53727 317 aa1.14□□□□□ -2.23
snR39BsnR39B SNP1Q00916 300 aaPredicted RBP1.14□□□□□ -2.23
snR39BsnR39B RSA1Q08932 381 aa1.14□□□□□ -2.23
snR39BsnR39B YMR230W-AQ3E7B5 62 aa1.14□□□□□ -2.23
snR39BsnR39B CET1O13297 549 aaPredicted RBP1.13□□□□□ -2.23
snR39BsnR39B REV1P12689 985 aa1.13□□□□□ -2.23
snR39BsnR39B RNR3P21672 869 aaKnown RBP1.13□□□□□ -2.23
snR39BsnR39B MTC2P34246 357 aa1.13□□□□□ -2.23
snR39BsnR39B YHR020WP38708 688 aaKnown RBP1.13□□□□□ -2.23
snR39BsnR39B SAE2P46946 345 aa1.13□□□□□ -2.23
snR39BsnR39B YGR125WP53273 1036 aa1.13□□□□□ -2.23
snR39BsnR39B BRE5P53741 515 aaKnown RBP1.13□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 83.4 ms