RNA–Protein interactions for RNA: snR128

snR128, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR128, Length 126 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR128	snR128	YOR111W	Q99210	232 aa		0.21	□□□□□ -2.38
snR128	snR128	CET1	O13297	549 aa	Predicted RBP	0.2	□□□□□ -2.38
snR128	snR128	RPS9A	O13516	197 aa	Known RBP	0.2	□□□□□ -2.38
snR128	snR128	YPR089W	O13585	888 aa		0.2	□□□□□ -2.38
snR128	snR128	SOD1	P00445	154 aa	Known RBP	0.2	□□□□□ -2.38
snR128	snR128	CIT1	P00890	479 aa		0.2	□□□□□ -2.38
snR128	snR128	TOM70	P07213	617 aa	Known RBP	0.2	□□□□□ -2.38
snR128	snR128	SWI6	P09959	803 aa		0.2	□□□□□ -2.38
snR128	snR128	ERR1	P0CX10	437 aa		0.2	□□□□□ -2.38
snR128	snR128	ERR2	P0CX11	437 aa		0.2	□□□□□ -2.38
snR128	snR128	GLN4	P13188	809 aa	Known RBP	0.2	□□□□□ -2.38
snR128	snR128	CDC26	P14724	124 aa		0.2	□□□□□ -2.38
snR128	snR128	RAD4	P14736	754 aa		0.2	□□□□□ -2.38
snR128	snR128	FRS1	P15624	595 aa	Known RBP	0.2	□□□□□ -2.38
snR128	snR128	NOP1	P15646	327 aa	Known RBP	0.2	□□□□□ -2.38
snR128	snR128	PRP16	P15938	1071 aa	Predicted RBP	0.2	□□□□□ -2.38
snR128	snR128	PRP9	P19736	530 aa	Known RBP	0.2	□□□□□ -2.38
snR128	snR128	CLN2	P20438	545 aa		0.2	□□□□□ -2.38
snR128	snR128	RNR3	P21672	869 aa	Known RBP	0.2	□□□□□ -2.38
snR128	snR128	RPA135	P22138	1203 aa	Known RBP	0.2	□□□□□ -2.38
snR128	snR128	GRX1	P25373	110 aa	Known RBP	0.2	□□□□□ -2.38
snR128	snR128	KCC4	P25389	1037 aa		0.2	□□□□□ -2.38
snR128	snR128	VBA3	P25594	458 aa		0.2	□□□□□ -2.38
snR128	snR128	PRE4	P30657	266 aa		0.2	□□□□□ -2.38
snR128	snR128	MGM1	P32266	881 aa		0.2	□□□□□ -2.38
snR128	snR128	NGG1	P32494	702 aa		0.2	□□□□□ -2.38
snR128	snR128	YKU70	P32807	602 aa		0.2	□□□□□ -2.38
snR128	snR128	ELF1	P36053	145 aa		0.2	□□□□□ -2.38
snR128	snR128	FMP46	P36141	133 aa	Known RBP	0.2	□□□□□ -2.38
snR128	snR128	PAM1	P37304	830 aa	Known RBP	0.2	□□□□□ -2.38
snR128	snR128	MAL31	P38156	614 aa		0.2	□□□□□ -2.38
snR128	snR128	AVT5	P38176	459 aa		0.2	□□□□□ -2.38
snR128	snR128	EHT1	P38295	451 aa		0.2	□□□□□ -2.38
snR128	snR128	COS111	P38308	924 aa		0.2	□□□□□ -2.38
snR128	snR128	ARC40	P38328	384 aa	Known RBP	0.2	□□□□□ -2.38
snR128	snR128	PCM1	P38628	557 aa	Known RBP	0.2	□□□□□ -2.38
snR128	snR128	SPC97	P38863	823 aa		0.2	□□□□□ -2.38
snR128	snR128	CRG1	P38892	291 aa	RIP-Chip data	0.2	□□□□□ -2.38	not detected
snR128	snR128	VPS41	P38959	992 aa		0.2	□□□□□ -2.38
snR128	snR128	FAA2	P39518	744 aa		0.2	□□□□□ -2.38
snR128	snR128	YMR124W	P39523	943 aa	Known RBP	0.2	□□□□□ -2.38
snR128	snR128	GDH3	P39708	457 aa		0.2	□□□□□ -2.38
snR128	snR128	SNF7	P39929	240 aa	Known RBP	0.2	□□□□□ -2.38
snR128	snR128	YAT2	P40017	923 aa		0.2	□□□□□ -2.38
snR128	snR128	FTR1	P40088	404 aa		0.2	□□□□□ -2.38
snR128	snR128	PIG2	P40187	538 aa		0.2	□□□□□ -2.38
snR128	snR128	LRO1	P40345	661 aa		0.2	□□□□□ -2.38
snR128	snR128	YIL169C	P40442	995 aa		0.2	□□□□□ -2.38
snR128	snR128	MNT3	P40549	630 aa		0.2	□□□□□ -2.38
snR128	snR128	CIN1	P40987	1014 aa		0.2	□□□□□ -2.38
snR128	snR128	SPG5	P42933	373 aa		0.2	□□□□□ -2.38
snR128	snR128	SNO3	P43544	222 aa		0.2	□□□□□ -2.38
snR128	snR128	IES1	P43579	692 aa		0.2	□□□□□ -2.38
snR128	snR128	YIP4	P53093	235 aa		0.2	□□□□□ -2.38
snR128	snR128	ERP6	P53198	216 aa		0.2	□□□□□ -2.38
snR128	snR128	COQ6	P53318	479 aa		0.2	□□□□□ -2.38
snR128	snR128	DIP5	P53388	608 aa		0.2	□□□□□ -2.38
snR128	snR128	SPC98	P53540	846 aa		0.2	□□□□□ -2.38
snR128	snR128	SPO1	P53541	631 aa		0.2	□□□□□ -2.38
snR128	snR128	IGO1	P53897	168 aa		0.2	□□□□□ -2.38
snR128	snR128	IMP4	P53941	290 aa	Known RBP	0.2	□□□□□ -2.38
snR128	snR128	ERG13	P54839	491 aa	Known RBP	0.2	□□□□□ -2.38
snR128	snR128	SNP1	Q00916	300 aa	Predicted RBP	0.2	□□□□□ -2.38
snR128	snR128	REC102	Q02721	264 aa		0.2	□□□□□ -2.38
snR128	snR128	VPS30	Q02948	557 aa		0.2	□□□□□ -2.38
snR128	snR128	FDC1	Q03034	503 aa		0.2	□□□□□ -2.38
snR128	snR128	YMR210W	Q03649	449 aa		0.2	□□□□□ -2.38
snR128	snR128	HLR1	Q04429	423 aa		0.2	□□□□□ -2.38
snR128	snR128	SMA2	Q04658	369 aa		0.2	□□□□□ -2.38
snR128	snR128	YMR034C	Q05131	434 aa	Predicted RBP	0.2	□□□□□ -2.38
snR128	snR128	RAD34	Q06665	692 aa		0.2	□□□□□ -2.38
snR128	snR128	REH1	Q06709	432 aa		0.2	□□□□□ -2.38
snR128	snR128	CYK3	Q07533	885 aa		0.2	□□□□□ -2.38
snR128	snR128	BUD7	Q08754	746 aa		0.2	□□□□□ -2.38
snR128	snR128	APL5	Q08951	932 aa	Known RBP	0.2	□□□□□ -2.38
snR128	snR128	PFA4	Q12006	378 aa		0.2	□□□□□ -2.38
snR128	snR128	GET3	Q12154	354 aa	Known RBP	0.2	□□□□□ -2.38
snR128	snR128	CLF1	Q12309	687 aa	Predicted RBP	0.2	□□□□□ -2.38
snR128	snR128	POM34	Q12445	299 aa		0.2	□□□□□ -2.38
snR128	snR128	YBR298C-A	Q8TGK4	73 aa		0.2	□□□□□ -2.38
snR128	snR128	DIF1	O13577	133 aa		0.19	□□□□□ -2.38
snR128	snR128	CHO2	P05374	869 aa	Known RBP	0.19	□□□□□ -2.38
snR128	snR128	ERG20	P08524	352 aa	Known RBP	0.19	□□□□□ -2.38
snR128	snR128	SRD1	P09007	221 aa		0.19	□□□□□ -2.38
snR128	snR128	HEM1	P09950	548 aa	Predicted RBP	0.19	□□□□□ -2.38
snR128	snR128	RPL42A	P0CX27	106 aa	Known RBP	0.19	□□□□□ -2.38
snR128	snR128	RPL42B	P0CX28	106 aa	Known RBP	0.19	□□□□□ -2.38
snR128	snR128	MRS3	P10566	314 aa		0.19	□□□□□ -2.38
snR128	snR128	AMD2	P22580	549 aa		0.19	□□□□□ -2.38
snR128	snR128	NAP1	P25293	417 aa	Known RBP	0.19	□□□□□ -2.38
snR128	snR128	RRP43	P25359	394 aa	Predicted RBP	0.19	□□□□□ -2.38
snR128	snR128	PCL2	P25693	308 aa		0.19	□□□□□ -2.38
snR128	snR128	COQ3	P27680	312 aa		0.19	□□□□□ -2.38
snR128	snR128	PRP45	P28004	379 aa	Predicted RBP	0.19	□□□□□ -2.38
snR128	snR128	MF(ALPHA)2	P32435	120 aa		0.19	□□□□□ -2.38
snR128	snR128	ASF1	P32447	279 aa		0.19	□□□□□ -2.38
snR128	snR128	EUG1	P32474	517 aa		0.19	□□□□□ -2.38
snR128	snR128	GSH1	P32477	678 aa		0.19	□□□□□ -2.38
snR128	snR128	HOG1	P32485	435 aa		0.19	□□□□□ -2.38
snR128	snR128	PET127	P32606	800 aa		0.19	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms