RNA–Protein interactions for RNA: YPR129W

SCD6, Transcript of Repressor of translation initiation, yeast

Gene SCD6, Length 1,050 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCD6	YPR129W	RUD3	Q12234	484 aa	Known RBP	4.11	□□□□□ -1.75
SCD6	YPR129W	ERP4	Q12450	207 aa		4.11	□□□□□ -1.75
SCD6	YPR129W	CEX1	Q12453	761 aa		4.11	□□□□□ -1.75
SCD6	YPR129W	SWI6	P09959	803 aa		4.1	□□□□□ -1.75
SCD6	YPR129W	RAD18	P10862	487 aa		4.1	□□□□□ -1.75
SCD6	YPR129W	ZUO1	P32527	433 aa	Known RBP	4.1	□□□□□ -1.75
SCD6	YPR129W	PAM1	P37304	830 aa	Known RBP	4.1	□□□□□ -1.75
SCD6	YPR129W	OPY1	P38271	328 aa		4.1	□□□□□ -1.75
SCD6	YPR129W	YHR097C	P38809	366 aa	Known RBP	4.1	□□□□□ -1.75
SCD6	YPR129W	PSA1	P41940	361 aa	Known RBP	4.1	□□□□□ -1.75
SCD6	YPR129W	RIX7	Q07844	837 aa	Known RBP	4.1	□□□□□ -1.75
SCD6	YPR129W	CHS5	Q12114	671 aa	Known RBP	4.1	□□□□□ -1.75
SCD6	YPR129W	ECM3	Q99252	613 aa		4.1	□□□□□ -1.75
SCD6	YPR129W	Q0142	Q9ZZW4	58 aa		4.1	□□□□□ -1.75
SCD6	YPR129W	LAM4	P38800	1345 aa		4.1	□□□□□ -1.75
SCD6	YPR129W	CAN1	P04817	590 aa		4.09	□□□□□ -1.75
SCD6	YPR129W	TPK2	P06245	380 aa		4.09	□□□□□ -1.75
SCD6	YPR129W	PSO2	P30620	661 aa		4.09	□□□□□ -1.75
SCD6	YPR129W	SEC6	P32844	805 aa		4.09	□□□□□ -1.75
SCD6	YPR129W	MTC2	P34246	357 aa		4.09	□□□□□ -1.75
SCD6	YPR129W	CTP1	P38152	299 aa		4.09	□□□□□ -1.75
SCD6	YPR129W	RSP5	P39940	809 aa	Known RBP	4.09	□□□□□ -1.75
SCD6	YPR129W	CHZ1	P40019	153 aa	Predicted RBP	4.09	□□□□□ -1.75
SCD6	YPR129W	NPY1	P53164	384 aa		4.09	□□□□□ -1.75
SCD6	YPR129W	NMA2	P53204	395 aa		4.09	□□□□□ -1.75
SCD6	YPR129W	COX18	P53239	316 aa		4.09	□□□□□ -1.75
SCD6	YPR129W	BTN2	P53286	410 aa		4.09	□□□□□ -1.75
SCD6	YPR129W	NDL1	Q06568	189 aa		4.09	□□□□□ -1.75
SCD6	YPR129W	MDM20	Q12387	796 aa	Known RBP	4.09	□□□□□ -1.75
SCD6	YPR129W	BRF1	P29056	596 aa		4.08	□□□□□ -1.76
SCD6	YPR129W	ARC19	P33204	171 aa	Known RBP	4.08	□□□□□ -1.76
SCD6	YPR129W	APL3	P38065	1025 aa		4.08	□□□□□ -1.76
SCD6	YPR129W	OCA5	P38738	679 aa		4.08	□□□□□ -1.76
SCD6	YPR129W	TPM2	P40414	161 aa		4.08	□□□□□ -1.76
SCD6	YPR129W	PMT6	P42934	759 aa		4.08	□□□□□ -1.76
SCD6	YPR129W	MPS3	P47069	682 aa		4.08	□□□□□ -1.76
SCD6	YPR129W	BFA1	P47113	574 aa		4.08	□□□□□ -1.76
SCD6	YPR129W	KEL2	P50090	882 aa		4.08	□□□□□ -1.76
SCD6	YPR129W	DSL1	P53847	754 aa		4.08	□□□□□ -1.76
SCD6	YPR129W	CDC31	P06704	161 aa	Known RBP	4.07	□□□□□ -1.76
SCD6	YPR129W	NFU1	P32860	256 aa		4.07	□□□□□ -1.76
SCD6	YPR129W	MCD4	P36051	919 aa		4.07	□□□□□ -1.76
SCD6	YPR129W	RPN10	P38886	268 aa	Known RBP	4.07	□□□□□ -1.76
SCD6	YPR129W	YHR218W	P38899	603 aa		4.07	□□□□□ -1.76
SCD6	YPR129W	OCA1	P50946	238 aa	Predicted RBP	4.07	□□□□□ -1.76
SCD6	YPR129W	PXR1	P53335	271 aa	Predicted RBP	4.07	□□□□□ -1.76
SCD6	YPR129W	RRP9	Q06506	573 aa	Known RBP	4.07	□□□□□ -1.76
SCD6	YPR129W	RKI1	Q12189	258 aa		4.07	□□□□□ -1.76
SCD6	YPR129W	BRR1	Q99177	341 aa	Predicted RBP	4.07	□□□□□ -1.76
SCD6	YPR129W	CHD1	P32657	1468 aa		4.06	□□□□□ -1.76
SCD6	YPR129W	YEF3	P16521	1044 aa	Known RBP	4.06	□□□□□ -1.76
SCD6	YPR129W	STE4	P18851	423 aa		4.06	□□□□□ -1.76
SCD6	YPR129W	SAS3	P34218	831 aa		4.06	□□□□□ -1.76
SCD6	YPR129W	KDX1	P36005	433 aa		4.06	□□□□□ -1.76
SCD6	YPR129W	EXO84	P38261	753 aa		4.06	□□□□□ -1.76
SCD6	YPR129W	KHA1	P40309	873 aa		4.06	□□□□□ -1.76
SCD6	YPR129W	YNL058C	P53947	316 aa		4.06	□□□□□ -1.76
SCD6	YPR129W	YDR179W-A	Q03983	463 aa		4.06	□□□□□ -1.76
SCD6	YPR129W	ARG7	Q04728	441 aa		4.06	□□□□□ -1.76
SCD6	YPR129W	COG4	Q06096	861 aa		4.06	□□□□□ -1.76
SCD6	YPR129W	ORM2	Q06144	216 aa		4.06	□□□□□ -1.76
SCD6	YPR129W	PSR1	Q07800	427 aa		4.06	□□□□□ -1.76
SCD6	YPR129W	APC2	Q12440	853 aa		4.06	□□□□□ -1.76
SCD6	YPR129W	NOP14	Q99207	810 aa	Known RBP	4.06	□□□□□ -1.76
SCD6	YPR129W	FEN2	P25621	512 aa	Known RBP	4.05	□□□□□ -1.76
SCD6	YPR129W	YKR018C	P36114	725 aa		4.05	□□□□□ -1.76
SCD6	YPR129W	YKR051W	P36142	418 aa		4.05	□□□□□ -1.76
SCD6	YPR129W	PET100	P38958	111 aa		4.05	□□□□□ -1.76
SCD6	YPR129W	SWD1	P39706	426 aa		4.05	□□□□□ -1.76
SCD6	YPR129W	YNL195C	P40168	261 aa		4.05	□□□□□ -1.76
SCD6	YPR129W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
SCD6	YPR129W	GPI8	P49018	411 aa		4.05	□□□□□ -1.76
SCD6	YPR129W	PCL10	P53124	433 aa		4.05	□□□□□ -1.76
SCD6	YPR129W	MRD1	Q06106	887 aa	Known RBP	4.05	□□□□□ -1.76
SCD6	YPR129W	NKP1	Q12493	238 aa		4.05	□□□□□ -1.76
SCD6	YPR129W	AI5_ALPHA	Q9ZZX1	630 aa		4.05	□□□□□ -1.76
SCD6	YPR129W	NIP100	P33420	868 aa		4.04	□□□□□ -1.76
SCD6	YPR129W	STO1	P34160	861 aa	Known RBP	4.04	□□□□□ -1.76
SCD6	YPR129W	TIF3	P34167	436 aa	Known RBP	4.04	□□□□□ -1.76
SCD6	YPR129W	MAL31	P38156	614 aa		4.04	□□□□□ -1.76
SCD6	YPR129W	BEM4	P39011	633 aa		4.04	□□□□□ -1.76
SCD6	YPR129W	PES4	P39684	611 aa		4.04	□□□□□ -1.76
SCD6	YPR129W	IRC8	P47046	822 aa		4.04	□□□□□ -1.76
SCD6	YPR129W	YJL049W	P47048	450 aa		4.04	□□□□□ -1.76
SCD6	YPR129W	RFX1	P48743	811 aa		4.04	□□□□□ -1.76
SCD6	YPR129W	SNP1	Q00916	300 aa	Predicted RBP	4.04	□□□□□ -1.76
SCD6	YPR129W	MDM1	Q01846	1127 aa		4.04	□□□□□ -1.76
SCD6	YPR129W	NGL2	Q03264	515 aa	Known RBP	4.04	□□□□□ -1.76
SCD6	YPR129W	PCL8	Q08966	492 aa		4.04	□□□□□ -1.76
SCD6	YPR129W	SNU66	Q12420	587 aa	Predicted RBP	4.04	□□□□□ -1.76
SCD6	YPR129W	CYB2	P00175	591 aa		4.03	□□□□□ -1.76
SCD6	YPR129W	VBA3	P25594	458 aa		4.03	□□□□□ -1.76
SCD6	YPR129W	AAD3	P25612	363 aa		4.03	□□□□□ -1.76
SCD6	YPR129W	NTH1	P32356	751 aa		4.03	□□□□□ -1.76
SCD6	YPR129W	SMY1	P32364	656 aa	Known RBP	4.03	□□□□□ -1.76
SCD6	YPR129W	HIR2	P32480	875 aa		4.03	□□□□□ -1.76
SCD6	YPR129W	ECM32	P32644	1121 aa	Known RBP	4.03	□□□□□ -1.76
SCD6	YPR129W	YEL1	P34225	687 aa		4.03	□□□□□ -1.76
SCD6	YPR129W	COY1	P34237	679 aa		4.03	□□□□□ -1.76
SCD6	YPR129W	MED8	P38304	223 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 99.3 ms