RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W YGL108CP53139 140 aa2.3□□□□□ -2.04
SEC16YPL085W ERG5P54781 538 aa2.3□□□□□ -2.04
SEC16YPL085W YML083CQ04526 418 aa2.3□□□□□ -2.04
SEC16YPL085W ECM30Q06673 1274 aa2.3□□□□□ -2.04
SEC16YPL085W LUC7Q07508 261 aaPredicted RBP2.3□□□□□ -2.04
SEC16YPL085W YRF1-1P0CX20 1796 aa2.3□□□□□ -2.04
SEC16YPL085W YRF1-5P0CX21 1796 aa2.3□□□□□ -2.04
SEC16YPL085W YRF1-8P0CX22 1796 aa2.3□□□□□ -2.04
SEC16YPL085W CDC33P07260 213 aaKnown RBP2.3□□□□□ -2.04
SEC16YPL085W GAP1P19145 602 aaPredicted RBP2.3□□□□□ -2.04
SEC16YPL085W UBA1P22515 1024 aaKnown RBP2.3□□□□□ -2.04
SEC16YPL085W RDS1P25611 832 aa2.3□□□□□ -2.04
SEC16YPL085W CSM1P25651 190 aa2.3□□□□□ -2.04
SEC16YPL085W OAF1P39720 1047 aaPredicted RBP2.3□□□□□ -2.04
SEC16YPL085W IMA5P40884 581 aa2.3□□□□□ -2.04
SEC16YPL085W VMA13P41807 478 aaKnown RBP2.3□□□□□ -2.04
SEC16YPL085W REX2P54964 269 aaKnown RBP2.3□□□□□ -2.04
SEC16YPL085W EMG1Q06287 252 aaKnown RBP2.3□□□□□ -2.04
SEC16YPL085W AAD4Q07747 329 aa2.3□□□□□ -2.04
SEC16YPL085W SEC15P22224 910 aa2.3□□□□□ -2.04
SEC16YPL085W RET1P22276 1149 aaKnown RBP2.3□□□□□ -2.04
SEC16YPL085W AMD2P22580 549 aa2.3□□□□□ -2.04
SEC16YPL085W RPL5P26321 297 aaKnown RBP2.3□□□□□ -2.04
SEC16YPL085W MRPL40P36534 297 aa2.3□□□□□ -2.04
SEC16YPL085W REI1P38344 393 aaPredicted RBP2.3□□□□□ -2.04
SEC16YPL085W PCA1P38360 1216 aa2.3□□□□□ -2.04
SEC16YPL085W AXL2P38928 823 aa2.3□□□□□ -2.04
SEC16YPL085W EMW1P42842 904 aaKnown RBP2.3□□□□□ -2.04
SEC16YPL085W BRO1P48582 844 aa2.3□□□□□ -2.04
SEC16YPL085W ROD1Q02805 837 aa2.3□□□□□ -2.04
SEC16YPL085W NOG1Q02892 647 aaKnown RBP2.3□□□□□ -2.04
SEC16YPL085W SAM3Q08986 587 aa2.3□□□□□ -2.04
SEC16YPL085W FAP7Q12055 197 aaPredicted RBP2.3□□□□□ -2.04
SEC16YPL085W SVS1Q12254 260 aa2.3□□□□□ -2.04
SEC16YPL085W LDB19Q12502 818 aa2.3□□□□□ -2.04
SEC16YPL085W CAR2P07991 424 aaKnown RBP2.3□□□□□ -2.04
SEC16YPL085W DAL7P21826 554 aa2.3□□□□□ -2.04
SEC16YPL085W YCR051WP25631 222 aa2.3□□□□□ -2.04
SEC16YPL085W GSY2P27472 705 aa2.3□□□□□ -2.04
SEC16YPL085W BRF1P29056 596 aa2.3□□□□□ -2.04
SEC16YPL085W NUF2P33895 451 aa2.3□□□□□ -2.04
SEC16YPL085W IFA38P38286 347 aa2.3□□□□□ -2.04
SEC16YPL085W NMD3P38861 518 aaKnown RBP2.3□□□□□ -2.04
SEC16YPL085W CSM2P40465 213 aa2.3□□□□□ -2.04
SEC16YPL085W PRK1P40494 810 aa2.3□□□□□ -2.04
SEC16YPL085W HUL4P40985 892 aa2.3□□□□□ -2.04
SEC16YPL085W PSP1P50896 841 aaKnown RBP2.3□□□□□ -2.04
SEC16YPL085W YMR130WQ04223 302 aa2.3□□□□□ -2.04
SEC16YPL085W CTI6Q08923 506 aa2.3□□□□□ -2.04
SEC16YPL085W MMP1Q12372 583 aa2.3□□□□□ -2.04
SEC16YPL085W GPH1P06738 902 aaKnown RBP2.3□□□□□ -2.04
SEC16YPL085W DBP3P20447 523 aaKnown RBP2.3□□□□□ -2.04
SEC16YPL085W DIA4P38705 446 aaPredicted RBP2.3□□□□□ -2.04
SEC16YPL085W OTU2P38747 307 aaKnown RBP2.3□□□□□ -2.04
SEC16YPL085W DHH1P39517 506 aaKnown RBP2.3□□□□□ -2.04
SEC16YPL085W RPH1P39956 796 aa2.3□□□□□ -2.04
SEC16YPL085W VFA1P40080 203 aa2.3□□□□□ -2.04
SEC16YPL085W DSN1P40568 576 aa2.3□□□□□ -2.04
SEC16YPL085W YJR079WP47126 109 aa2.3□□□□□ -2.04
SEC16YPL085W NNF1P47149 201 aa2.3□□□□□ -2.04
SEC16YPL085W CTH1P47976 325 aa2.3□□□□□ -2.04
SEC16YPL085W SPC105P53148 917 aa2.3□□□□□ -2.04
SEC16YPL085W TIM8P57744 87 aa2.3□□□□□ -2.04
SEC16YPL085W RSC4Q02206 625 aa2.3□□□□□ -2.04
SEC16YPL085W PRM6Q04705 352 aa2.3□□□□□ -2.04
SEC16YPL085W BCH1Q05029 724 aa2.3□□□□□ -2.04
SEC16YPL085W ALR1Q08269 859 aa2.3□□□□□ -2.04
SEC16YPL085W YDR056CQ12025 205 aa2.3□□□□□ -2.04
SEC16YPL085W PHO5P00635 467 aa2.29□□□□□ -2.04
SEC16YPL085W ACE2P21192 770 aa2.29□□□□□ -2.04
SEC16YPL085W TKL1P23254 680 aaKnown RBP2.29□□□□□ -2.04
SEC16YPL085W HRR25P29295 494 aaKnown RBP2.29□□□□□ -2.04
SEC16YPL085W FUN30P31380 1131 aa2.29□□□□□ -2.04
SEC16YPL085W MSS51P32335 436 aa2.29□□□□□ -2.04
SEC16YPL085W SRB5P32585 307 aa2.29□□□□□ -2.04
SEC16YPL085W RAD54P32863 898 aa2.29□□□□□ -2.04
SEC16YPL085W MRP8P35719 219 aa2.29□□□□□ -2.04
SEC16YPL085W PIM1P36775 1133 aa2.29□□□□□ -2.04
SEC16YPL085W LDH1P38139 375 aa2.29□□□□□ -2.04
SEC16YPL085W PHO88P38264 188 aaPredicted RBP2.29□□□□□ -2.04
SEC16YPL085W HXT5P38695 592 aa2.29□□□□□ -2.04
SEC16YPL085W AKR1P39010 764 aa2.29□□□□□ -2.04
SEC16YPL085W YAT2P40017 923 aa2.29□□□□□ -2.04
SEC16YPL085W MAM33P40513 266 aa2.29□□□□□ -2.04
SEC16YPL085W COG5P53951 403 aa2.29□□□□□ -2.04
SEC16YPL085W OPT2Q06593 877 aa2.29□□□□□ -2.04
SEC16YPL085W TPO1Q07824 586 aa2.29□□□□□ -2.04
SEC16YPL085W ATE1P16639 503 aa2.29□□□□□ -2.04
SEC16YPL085W MSB1P21339 1137 aaKnown RBP2.29□□□□□ -2.04
SEC16YPL085W MRPS28P21771 286 aa2.29□□□□□ -2.04
SEC16YPL085W COY1P34237 679 aa2.29□□□□□ -2.04
SEC16YPL085W YJR061WP40355 935 aa2.29□□□□□ -2.04
SEC16YPL085W LSM1P47017 172 aaKnown RBP2.29□□□□□ -2.04
SEC16YPL085W HFM1P51979 1187 aa2.29□□□□□ -2.04
SEC16YPL085W YDR090CQ03193 310 aa2.29□□□□□ -2.04
SEC16YPL085W SPO20Q04359 397 aa2.29□□□□□ -2.04
SEC16YPL085W INM2Q05533 292 aa2.29□□□□□ -2.04
SEC16YPL085W PUS5Q06244 254 aa2.29□□□□□ -2.04
SEC16YPL085W SFG1Q12507 346 aa2.29□□□□□ -2.04
SEC16YPL085W FRT1Q99332 602 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 96.1 ms