RNA–Protein interactions for RNA: YOL047C

LDS2, Transcript of Protein Involved in spore wall assembly, yeast

Gene LDS2, Length 1,071 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDS2	YOL047C	HEL1	P36113	551 aa		3.87	□□□□□ -1.79
LDS2	YOL047C	SHM2	P37291	469 aa	Known RBP	3.87	□□□□□ -1.79
LDS2	YOL047C	CCZ1	P38273	704 aa		3.87	□□□□□ -1.79
LDS2	YOL047C	RRM3	P38766	723 aa		3.87	□□□□□ -1.79
LDS2	YOL047C	SIT1	P39980	628 aa		3.87	□□□□□ -1.79
LDS2	YOL047C	LYS14	P40971	790 aa		3.87	□□□□□ -1.79
LDS2	YOL047C	PXA1	P41909	870 aa		3.87	□□□□□ -1.79
LDS2	YOL047C	SBE2	P42223	864 aa	Known RBP	3.87	□□□□□ -1.79
LDS2	YOL047C	ALY2	P47029	1046 aa		3.87	□□□□□ -1.79
LDS2	YOL047C	VPS53	P47061	822 aa		3.87	□□□□□ -1.79
LDS2	YOL047C	YPT11	P48559	417 aa		3.87	□□□□□ -1.79
LDS2	YOL047C	RRT6	P53117	311 aa	Predicted RBP	3.87	□□□□□ -1.79
LDS2	YOL047C	WAR1	Q03631	944 aa		3.87	□□□□□ -1.79
LDS2	YOL047C	NHX1	Q04121	633 aa		3.87	□□□□□ -1.79
LDS2	YOL047C	RRB1	Q04225	511 aa	Known RBP	3.87	□□□□□ -1.79
LDS2	YOL047C	CSI1	Q04368	295 aa		3.87	□□□□□ -1.79
LDS2	YOL047C	ENV7	Q12003	364 aa		3.87	□□□□□ -1.79
LDS2	YOL047C	YOR223W	Q12015	292 aa		3.87	□□□□□ -1.79
LDS2	YOL047C	PTC5	Q12511	572 aa		3.87	□□□□□ -1.79
LDS2	YOL047C	Q0142	Q9ZZW4	58 aa		3.87	□□□□□ -1.79
LDS2	YOL047C	SEC7	P11075	2009 aa	Known RBP	3.87	□□□□□ -1.79
LDS2	YOL047C	MRP10	O75012	95 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	SNF1	P06782	633 aa	Known RBP	3.86	□□□□□ -1.79
LDS2	YOL047C	HTS1	P07263	546 aa	Known RBP	3.86	□□□□□ -1.79
LDS2	YOL047C	LEU1	P07264	779 aa	Known RBP	3.86	□□□□□ -1.79
LDS2	YOL047C	MRP7	P12687	371 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	KRS1	P15180	591 aa	Known RBP	3.86	□□□□□ -1.79
LDS2	YOL047C	RGP1	P16664	663 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	ADP1	P25371	1049 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	NFS1	P25374	497 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	YCL002C	P25565	263 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	GSY2	P27472	705 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	SLA1	P32790	1244 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	EMC3	P36039	253 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	NOP4	P37838	685 aa	Known RBP	3.86	□□□□□ -1.79
LDS2	YOL047C	PCH2	P38126	564 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	APM3	P38153	483 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	RFT1	P38206	574 aa	Predicted RBP	3.86	□□□□□ -1.79
LDS2	YOL047C	REI1	P38344	393 aa	Predicted RBP	3.86	□□□□□ -1.79
LDS2	YOL047C	POP2	P39008	433 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	DUN1	P39009	513 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	GPB2	P39717	880 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	BUD16	P39988	312 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	MAM1	P40065	302 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	SMK1	P41808	388 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	YFL054C	P43549	646 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	MAD3	P47074	515 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	YJR079W	P47126	109 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	ILM1	P47155	203 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	APT1	P49435	187 aa	Known RBP	3.86	□□□□□ -1.79
LDS2	YOL047C	CNM67	P53865	581 aa	Known RBP	3.86	□□□□□ -1.79
LDS2	YOL047C	PTA1	Q01329	785 aa	Predicted RBP	3.86	□□□□□ -1.79
LDS2	YOL047C	SRT1	Q03175	343 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	ARO80	Q04052	950 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	TAF11	Q04226	346 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	SFH1	Q06168	426 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	LAP2	Q10740	671 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	CWC2	Q12046	339 aa	Predicted RBP	3.86	□□□□□ -1.79
LDS2	YOL047C	GNT1	Q12096	491 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	HAL9	Q12180	1030 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	TAH18	Q12181	623 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	NFI1	Q12216	726 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	RUD3	Q12234	484 aa	Known RBP	3.86	□□□□□ -1.79
LDS2	YOL047C	YLL054C	Q12244	843 aa		3.86	□□□□□ -1.79
LDS2	YOL047C	RPO41	P13433	1351 aa	Known RBP	3.86	□□□□□ -1.79
LDS2	YOL047C	RPA190	P10964	1664 aa	Known RBP	3.85	□□□□□ -1.79
LDS2	YOL047C	RPL11A	P0C0W9	174 aa	Known RBP	3.85	□□□□□ -1.79
LDS2	YOL047C	NCP1	P16603	691 aa	Known RBP	3.85	□□□□□ -1.79
LDS2	YOL047C	TPM1	P17536	199 aa	Known RBP	3.85	□□□□□ -1.79
LDS2	YOL047C	PHO13	P19881	312 aa		3.85	□□□□□ -1.79
LDS2	YOL047C	RDS1	P25611	832 aa		3.85	□□□□□ -1.79
LDS2	YOL047C	SEC65	P29478	273 aa		3.85	□□□□□ -1.79
LDS2	YOL047C	CDC12	P32468	407 aa	Known RBP	3.85	□□□□□ -1.79
LDS2	YOL047C	OAF3	P36023	863 aa		3.85	□□□□□ -1.79
LDS2	YOL047C	YKL151C	P36059	337 aa		3.85	□□□□□ -1.79
LDS2	YOL047C	AAP1	P37898	856 aa	Known RBP	3.85	□□□□□ -1.79
LDS2	YOL047C	NCL1	P38205	684 aa	Known RBP	3.85	□□□□□ -1.79
LDS2	YOL047C	ATG14	P38270	344 aa		3.85	□□□□□ -1.79
LDS2	YOL047C	IFA38	P38286	347 aa		3.85	□□□□□ -1.79
LDS2	YOL047C	SRP72	P38688	640 aa	Known RBP	3.85	□□□□□ -1.79
LDS2	YOL047C	LAM1	P38851	1228 aa		3.85	□□□□□ -1.79
LDS2	YOL047C	YHR202W	P38887	602 aa		3.85	□□□□□ -1.79
LDS2	YOL047C	EMP65	P40085	556 aa		3.85	□□□□□ -1.79
LDS2	YOL047C	SPO22	P40511	975 aa		3.85	□□□□□ -1.79
LDS2	YOL047C	TRS85	P46944	698 aa		3.85	□□□□□ -1.79
LDS2	YOL047C	SKP1	P52286	194 aa		3.85	□□□□□ -1.79
LDS2	YOL047C	HOS2	P53096	452 aa	Predicted RBP	3.85	□□□□□ -1.79
LDS2	YOL047C	CAF130	P53280	1122 aa	Predicted RBP	3.85	□□□□□ -1.79
LDS2	YOL047C	YGR250C	P53316	781 aa	Known RBP	3.85	□□□□□ -1.79
LDS2	YOL047C	YNR065C	P53751	1116 aa		3.85	□□□□□ -1.79
LDS2	YOL047C	VPS75	P53853	264 aa		3.85	□□□□□ -1.79
LDS2	YOL047C	SEC5	P89102	971 aa		3.85	□□□□□ -1.79
LDS2	YOL047C	NAM8	Q00539	523 aa	Known RBP	3.85	□□□□□ -1.79
LDS2	YOL047C	ATP25	Q03153	612 aa		3.85	□□□□□ -1.79
LDS2	YOL047C	HOT1	Q03213	719 aa		3.85	□□□□□ -1.79
LDS2	YOL047C	LRS4	Q04087	347 aa	Known RBP	3.85	□□□□□ -1.79
LDS2	YOL047C	YDR514C	Q04408	483 aa		3.85	□□□□□ -1.79
LDS2	YOL047C	HLR1	Q04429	423 aa		3.85	□□□□□ -1.79
LDS2	YOL047C	MFB1	Q04922	465 aa		3.85	□□□□□ -1.79
LDS2	YOL047C	CRR1	Q05790	422 aa		3.85	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 96.5 ms