RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W RUD3Q12234 484 aaKnown RBP6.21□□□□□ -1.42
ATG4YNL223W ARG4P04076 463 aaPredicted RBP6.2□□□□□ -1.42
ATG4YNL223W GAL80P04387 435 aa6.2□□□□□ -1.42
ATG4YNL223W GCR1P07261 785 aa6.2□□□□□ -1.42
ATG4YNL223W ADH4P10127 382 aa6.2□□□□□ -1.42
ATG4YNL223W CBF1P17106 351 aa6.2□□□□□ -1.42
ATG4YNL223W SPO16P17122 198 aa6.2□□□□□ -1.42
ATG4YNL223W LRE1P25579 583 aaKnown RBP6.2□□□□□ -1.42
ATG4YNL223W SRB2P34162 210 aa6.2□□□□□ -1.42
ATG4YNL223W ERP2P39704 215 aa6.2□□□□□ -1.42
ATG4YNL223W YIL054WP40524 105 aa6.2□□□□□ -1.42
ATG4YNL223W INA22P40576 216 aa6.2□□□□□ -1.42
ATG4YNL223W MKT1P40850 830 aaKnown RBP6.2□□□□□ -1.42
ATG4YNL223W YGR035CP53222 116 aa6.2□□□□□ -1.42
ATG4YNL223W SPC98P53540 846 aa6.2□□□□□ -1.42
ATG4YNL223W YNL108CP53929 270 aa6.2□□□□□ -1.42
ATG4YNL223W YNL040WP53960 456 aaPredicted RBP6.2□□□□□ -1.42
ATG4YNL223W ELP3Q02908 557 aaKnown RBP6.2□□□□□ -1.42
ATG4YNL223W PNP1Q05788 311 aa6.2□□□□□ -1.42
ATG4YNL223W MAG2Q06436 670 aaKnown RBP6.2□□□□□ -1.42
ATG4YNL223W OMS1Q06668 471 aa6.2□□□□□ -1.42
ATG4YNL223W CIR2Q08822 631 aa6.2□□□□□ -1.42
ATG4YNL223W REC8Q12188 680 aa6.2□□□□□ -1.42
ATG4YNL223W VPS5Q92331 675 aa6.2□□□□□ -1.42
ATG4YNL223W CIT2P08679 460 aa6.19□□□□□ -1.42
ATG4YNL223W MEI4P29467 408 aa6.19□□□□□ -1.42
ATG4YNL223W YME1P32795 747 aa6.19□□□□□ -1.42
ATG4YNL223W PEX2P32800 271 aa6.19□□□□□ -1.42
ATG4YNL223W SLA2P33338 968 aa6.19□□□□□ -1.42
ATG4YNL223W CCL1P37366 393 aa6.19□□□□□ -1.42
ATG4YNL223W SHE3P38272 425 aaKnown RBP6.19□□□□□ -1.42
ATG4YNL223W SLX1P38324 304 aa6.19□□□□□ -1.42
ATG4YNL223W POP4P38336 279 aa6.19□□□□□ -1.42
ATG4YNL223W BRL1P38770 471 aa6.19□□□□□ -1.42
ATG4YNL223W CCT2P39076 527 aaKnown RBP6.19□□□□□ -1.42
ATG4YNL223W FLC2P39719 783 aa6.19□□□□□ -1.42
ATG4YNL223W AVT2P39981 480 aa6.19□□□□□ -1.42
ATG4YNL223W SMX2P40204 77 aaKnown RBP6.19□□□□□ -1.42
ATG4YNL223W SIP5P40210 489 aaKnown RBP6.19□□□□□ -1.42
ATG4YNL223W PFD1P46988 109 aa6.19□□□□□ -1.42
ATG4YNL223W ALY2P47029 1046 aa6.19□□□□□ -1.42
ATG4YNL223W RSM26P47141 266 aa6.19□□□□□ -1.42
ATG4YNL223W YNL247WP53852 767 aaKnown RBP6.19□□□□□ -1.42
ATG4YNL223W PRM6Q04705 352 aa6.19□□□□□ -1.42
ATG4YNL223W TAF9Q05027 157 aa6.19□□□□□ -1.42
ATG4YNL223W ECM30Q06673 1274 aa6.19□□□□□ -1.42
ATG4YNL223W FRA1Q07825 749 aa6.19□□□□□ -1.42
ATG4YNL223W ESC8Q08119 714 aa6.19□□□□□ -1.42
ATG4YNL223W FAP7Q12055 197 aaPredicted RBP6.19□□□□□ -1.42
ATG4YNL223W SEY1Q99287 776 aa6.19□□□□□ -1.42
ATG4YNL223W YPK1P12688 680 aaKnown RBP6.18□□□□□ -1.42
ATG4YNL223W SDH2P21801 266 aa6.18□□□□□ -1.42
ATG4YNL223W SLY1P22213 666 aa6.18□□□□□ -1.42
ATG4YNL223W DUG2P38149 878 aa6.18□□□□□ -1.42
ATG4YNL223W POA1P38218 177 aa6.18□□□□□ -1.42
ATG4YNL223W LYS9P38999 446 aa6.18□□□□□ -1.42
ATG4YNL223W SAW1P39735 261 aa6.18□□□□□ -1.42
ATG4YNL223W RGD2P43556 714 aa6.18□□□□□ -1.42
ATG4YNL223W SPO74P45819 413 aa6.18□□□□□ -1.42
ATG4YNL223W URB2P47108 1174 aa6.18□□□□□ -1.42
ATG4YNL223W HLJ1P48353 224 aa6.18□□□□□ -1.42
ATG4YNL223W YGR283CP53336 341 aaPredicted RBP6.18□□□□□ -1.42
ATG4YNL223W CPR6P53691 371 aaKnown RBP6.18□□□□□ -1.42
ATG4YNL223W YNL011CP53980 444 aa6.18□□□□□ -1.42
ATG4YNL223W YPL062WQ02781 134 aa6.18□□□□□ -1.42
ATG4YNL223W YPL034WQ03083 165 aa6.18□□□□□ -1.42
ATG4YNL223W USA1Q03714 838 aa6.18□□□□□ -1.42
ATG4YNL223W YDL129WQ07555 291 aa6.18□□□□□ -1.42
ATG4YNL223W PKH2Q12236 1081 aaKnown RBP6.18□□□□□ -1.42
ATG4YNL223W RRD2Q12461 358 aa6.18□□□□□ -1.42
ATG4YNL223W HAP2P06774 265 aa6.17□□□□□ -1.42
ATG4YNL223W HEM15P16622 393 aa6.17□□□□□ -1.42
ATG4YNL223W ILV6P25605 309 aaKnown RBP6.17□□□□□ -1.42
ATG4YNL223W YCR015CP25616 317 aa6.17□□□□□ -1.42
ATG4YNL223W MGT1P26188 188 aa6.17□□□□□ -1.42
ATG4YNL223W TPS2P31688 896 aaKnown RBP6.17□□□□□ -1.42
ATG4YNL223W RPC37P36121 282 aa6.17□□□□□ -1.42
ATG4YNL223W GRS1P38088 690 aaKnown RBP6.17□□□□□ -1.42
ATG4YNL223W HSL7P38274 827 aa6.17□□□□□ -1.42
ATG4YNL223W NMD3P38861 518 aaKnown RBP6.17□□□□□ -1.42
ATG4YNL223W VPS41P38959 992 aa6.17□□□□□ -1.42
ATG4YNL223W PXA1P41909 870 aa6.17□□□□□ -1.42
ATG4YNL223W FMP30Q02883 468 aa6.17□□□□□ -1.42
ATG4YNL223W FMP25Q08023 583 aa6.17□□□□□ -1.42
ATG4YNL223W RCL1Q08096 367 aaPredicted RBP6.17□□□□□ -1.42
ATG4YNL223W SDH5Q08230 162 aa6.17□□□□□ -1.42
ATG4YNL223W GPM2Q12008 311 aa6.17□□□□□ -1.42
ATG4YNL223W AI4P03878 556 aa6.16□□□□□ -1.42
ATG4YNL223W CDC24P11433 854 aaPredicted RBP6.16□□□□□ -1.42
ATG4YNL223W POL3P15436 1097 aa6.16□□□□□ -1.42
ATG4YNL223W CAD1P24813 409 aaKnown RBP6.16□□□□□ -1.42
ATG4YNL223W TKL2P33315 681 aa6.16□□□□□ -1.42
ATG4YNL223W OAF3P36023 863 aa6.16□□□□□ -1.42
ATG4YNL223W MRPL7P36519 292 aa6.16□□□□□ -1.42
ATG4YNL223W YBR284WP38150 797 aa6.16□□□□□ -1.42
ATG4YNL223W APN2P38207 520 aa6.16□□□□□ -1.42
ATG4YNL223W YHR202WP38887 602 aa6.16□□□□□ -1.42
ATG4YNL223W XDJ1P39102 459 aa6.16□□□□□ -1.42
ATG4YNL223W PRK1P40494 810 aa6.16□□□□□ -1.42
ATG4YNL223W SHR3Q02774 210 aa6.16□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms