RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C ECM13P38195 257 aa12.18□□□□□ -0.46
YKR040CYKR040C SET5P38890 526 aaKnown RBP12.18□□□□□ -0.46
YKR040CYKR040C UFE1P41834 346 aa12.18□□□□□ -0.46
YKR040CYKR040C TOF2Q02208 771 aa12.18□□□□□ -0.46
YKR040CYKR040C SEG1Q04279 960 aa12.18□□□□□ -0.46
YKR040CYKR040C GYL1Q04322 720 aa12.18□□□□□ -0.46
YKR040CYKR040C AIM32Q04689 311 aa12.18□□□□□ -0.46
YKR040CYKR040C SVS1Q12254 260 aa12.18□□□□□ -0.46
YKR040CYKR040C CLC1P17891 233 aa12.17□□□□□ -0.46
YKR040CYKR040C ARP1P38696 384 aa12.17□□□□□ -0.46
YKR040CYKR040C TMN3P40071 706 aa12.17□□□□□ -0.46
YKR040CYKR040C GYP8P43570 497 aa12.17□□□□□ -0.46
YKR040CYKR040C COQ6P53318 479 aa12.17□□□□□ -0.46
YKR040CYKR040C YGR283CP53336 341 aaPredicted RBP12.17□□□□□ -0.46
YKR040CYKR040C JJJ1P53863 590 aa12.17□□□□□ -0.46
YKR040CYKR040C YNL144CP53907 740 aa12.17□□□□□ -0.46
YKR040CYKR040C IMP4P53941 290 aaKnown RBP12.17□□□□□ -0.46
YKR040CYKR040C ELP3Q02908 557 aaKnown RBP12.17□□□□□ -0.46
YKR040CYKR040C YMR018WQ04364 514 aa12.17□□□□□ -0.46
YKR040CYKR040C SIL1Q08199 421 aa12.17□□□□□ -0.46
YKR040CYKR040C YOR387CQ08910 206 aa12.17□□□□□ -0.46
YKR040CYKR040C PAB1P04147 577 aaKnown RBP RIP-Chip data12.16□□□□□ -0.46not detected
YKR040CYKR040C ABD1P32783 436 aaPredicted RBP12.16□□□□□ -0.46
YKR040CYKR040C PTC3P34221 468 aaKnown RBP12.16□□□□□ -0.46
YKR040CYKR040C BLI1P35727 113 aa12.16□□□□□ -0.46
YKR040CYKR040C NEM1P38757 446 aa12.16□□□□□ -0.46
YKR040CYKR040C LYS9P38999 446 aa12.16□□□□□ -0.46
YKR040CYKR040C CHS6P40955 746 aa12.16□□□□□ -0.46
YKR040CYKR040C ATH1P48016 1211 aa12.16□□□□□ -0.46
YKR040CYKR040C COP1P53622 1201 aaKnown RBP12.16□□□□□ -0.46
YKR040CYKR040C PIR3Q03180 325 aa12.16□□□□□ -0.46
YKR040CYKR040C DAS2Q12084 232 aa12.16□□□□□ -0.46
YKR040CYKR040C RPS9AO13516 197 aaKnown RBP12.15□□□□□ -0.46
YKR040CYKR040C ENO2P00925 437 aaKnown RBP12.15□□□□□ -0.46
YKR040CYKR040C ADE3P07245 946 aaKnown RBP12.15□□□□□ -0.46
YKR040CYKR040C FUS1P11710 512 aa12.15□□□□□ -0.46
YKR040CYKR040C TRX1P22217 103 aaKnown RBP12.15□□□□□ -0.46
YKR040CYKR040C YIH1P25637 258 aa12.15□□□□□ -0.46
YKR040CYKR040C PCH2P38126 564 aa12.15□□□□□ -0.46
YKR040CYKR040C NMD3P38861 518 aaKnown RBP12.15□□□□□ -0.46
YKR040CYKR040C YIL054WP40524 105 aa12.15□□□□□ -0.46
YKR040CYKR040C KTR6P54070 446 aa12.15□□□□□ -0.46
YKR040CYKR040C ECM38Q05902 660 aaPredicted RBP12.15□□□□□ -0.46
YKR040CYKR040C CIR2Q08822 631 aa12.15□□□□□ -0.46
YKR040CYKR040C CAP1P28495 268 aaKnown RBP12.14□□□□□ -0.47
YKR040CYKR040C SGE1P33335 543 aa12.14□□□□□ -0.47
YKR040CYKR040C SEG2P34250 1132 aa12.14□□□□□ -0.47
YKR040CYKR040C KTR4P38131 464 aa12.14□□□□□ -0.47
YKR040CYKR040C SWC5P38326 303 aa12.14□□□□□ -0.47
YKR040CYKR040C GGA2P38817 585 aaKnown RBP12.14□□□□□ -0.47
YKR040CYKR040C ASG1P40467 964 aa12.14□□□□□ -0.47
YKR040CYKR040C OSW7P43611 510 aa12.14□□□□□ -0.47
YKR040CYKR040C ALF1P53904 254 aa12.14□□□□□ -0.47
YKR040CYKR040C RKM2Q03942 479 aa12.14□□□□□ -0.47
YKR040CYKR040C AAD4Q07747 329 aa12.14□□□□□ -0.47
YKR040CYKR040C MPD2Q99316 277 aa12.14□□□□□ -0.47
YKR040CYKR040C YPK1P12688 680 aaKnown RBP12.13□□□□□ -0.47
YKR040CYKR040C CYC8P14922 966 aa12.13□□□□□ -0.47
YKR040CYKR040C SPC72P39723 622 aa12.13□□□□□ -0.47
YKR040CYKR040C DOT6P40059 670 aaKnown RBP12.13□□□□□ -0.47
YKR040CYKR040C RTT101P47050 842 aa12.13□□□□□ -0.47
YKR040CYKR040C YJR079WP47126 109 aa12.13□□□□□ -0.47
YKR040CYKR040C PEX31P53203 462 aa12.13□□□□□ -0.47
YKR040CYKR040C YNR061CP53747 219 aa12.13□□□□□ -0.47
YKR040CYKR040C YNL108CP53929 270 aa12.13□□□□□ -0.47
YKR040CYKR040C CTR9P89105 1077 aa12.13□□□□□ -0.47
YKR040CYKR040C YPL014WQ02606 381 aa12.13□□□□□ -0.47
YKR040CYKR040C ATG16Q03818 150 aa12.13□□□□□ -0.47
YKR040CYKR040C SOV1Q04748 898 aa12.13□□□□□ -0.47
YKR040CYKR040C ERG11P10614 530 aa12.12□□□□□ -0.47
YKR040CYKR040C GFA1P14742 717 aaKnown RBP12.12□□□□□ -0.47
YKR040CYKR040C MRM1P25270 412 aa12.12□□□□□ -0.47
YKR040CYKR040C RAD57P25301 460 aa12.12□□□□□ -0.47
YKR040CYKR040C GPI10P30777 616 aa12.12□□□□□ -0.47
YKR040CYKR040C DBF4P32325 704 aa12.12□□□□□ -0.47
YKR040CYKR040C TMA108P40462 946 aa12.12□□□□□ -0.47
YKR040CYKR040C SND1Q04007 877 aa12.12□□□□□ -0.47
YKR040CYKR040C RTN1Q04947 295 aaKnown RBP12.12□□□□□ -0.47
YKR040CYKR040C YLR001CQ07895 862 aa12.12□□□□□ -0.47
YKR040CYKR040C THI21Q08975 551 aa12.12□□□□□ -0.47
YKR040CYKR040C REV1P12689 985 aa12.11□□□□□ -0.47
YKR040CYKR040C KIN3P22209 435 aa12.11□□□□□ -0.47
YKR040CYKR040C SWE1P32944 819 aa12.11□□□□□ -0.47
YKR040CYKR040C RRT2P38332 387 aa12.11□□□□□ -0.47
YKR040CYKR040C HIS2P38635 335 aa12.11□□□□□ -0.47
YKR040CYKR040C PRM9P39551 298 aa12.11□□□□□ -0.47
YKR040CYKR040C RSM26P47141 266 aa12.11□□□□□ -0.47
YKR040CYKR040C CDC55Q00362 526 aa12.11□□□□□ -0.47
YKR040CYKR040C INA17Q02888 182 aa12.11□□□□□ -0.47
YKR040CYKR040C IVY1Q04934 453 aa12.11□□□□□ -0.47
YKR040CYKR040C YDL073WQ07454 984 aa12.11□□□□□ -0.47
YKR040CYKR040C PUF3Q07807 879 aaKnown RBP RIP-Chip data12.11□□□□□ -0.47not detected
YKR040CYKR040C FLC1Q08967 793 aa12.11□□□□□ -0.47
YKR040CYKR040C PUF2Q12221 1075 aaKnown RBP RIP-Chip data12.11□□□□□ -0.47not detected
YKR040CYKR040C CET1O13297 549 aaPredicted RBP12.1□□□□□ -0.47
YKR040CYKR040C SEC23P15303 768 aaKnown RBP12.1□□□□□ -0.47
YKR040CYKR040C HXT1P32465 570 aa12.1□□□□□ -0.47
YKR040CYKR040C SEC6P32844 805 aa12.1□□□□□ -0.47
YKR040CYKR040C URA8P38627 578 aaPredicted RBP12.1□□□□□ -0.47
YKR040CYKR040C HXT5P38695 592 aa12.1□□□□□ -0.47
Retrieved 100 of 5,963 RNA–protein pairs in 60.3 ms