RNA–Protein interactions for RNA: YKL193C

SDS22, Transcript of Regulatory subunit of the type 1 protein phosphatase (PP1) Glc7p, yeast

Gene SDS22, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDS22	YKL193C	GZF3	P42944	551 aa	Known RBP	4.21	□□□□□ -1.74
SDS22	YKL193C	BIT61	P47041	543 aa		4.21	□□□□□ -1.74
SDS22	YKL193C	BFA1	P47113	574 aa		4.21	□□□□□ -1.74
SDS22	YKL193C	ECM9	Q02202	377 aa		4.21	□□□□□ -1.74
SDS22	YKL193C	YMR210W	Q03649	449 aa		4.21	□□□□□ -1.74
SDS22	YKL193C	YPS7	Q06325	596 aa		4.21	□□□□□ -1.74
SDS22	YKL193C	CHS5	Q12114	671 aa	Known RBP	4.21	□□□□□ -1.74
SDS22	YKL193C	PRP28	P23394	588 aa		4.2	□□□□□ -1.74
SDS22	YKL193C	YIL077C	P40508	320 aa		4.2	□□□□□ -1.74
SDS22	YKL193C	GPP1	P41277	250 aa	Known RBP	4.2	□□□□□ -1.74
SDS22	YKL193C	IRC8	P47046	822 aa		4.2	□□□□□ -1.74
SDS22	YKL193C	RFX1	P48743	811 aa		4.2	□□□□□ -1.74
SDS22	YKL193C	YGR237C	P50089	785 aa		4.2	□□□□□ -1.74
SDS22	YKL193C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
SDS22	YKL193C	SEC65	P29478	273 aa		4.19	□□□□□ -1.74
SDS22	YKL193C	OAF1	P39720	1047 aa	Predicted RBP	4.19	□□□□□ -1.74
SDS22	YKL193C	NMA2	P53204	395 aa		4.19	□□□□□ -1.74
SDS22	YKL193C	NOP15	P53927	220 aa	Predicted RBP	4.19	□□□□□ -1.74
SDS22	YKL193C	VBA4	Q04602	768 aa	Known RBP	4.19	□□□□□ -1.74
SDS22	YKL193C	BMS1	Q08965	1183 aa	Known RBP	4.19	□□□□□ -1.74
SDS22	YKL193C	YTM1	Q12024	460 aa	Predicted RBP	4.19	□□□□□ -1.74
SDS22	YKL193C	FAP7	Q12055	197 aa	Predicted RBP	4.19	□□□□□ -1.74
SDS22	YKL193C	LAM4	P38800	1345 aa		4.19	□□□□□ -1.74
SDS22	YKL193C	RPS17A	P02407	136 aa	Known RBP	4.18	□□□□□ -1.74
SDS22	YKL193C	RPS9B	P05755	195 aa	Known RBP	4.18	□□□□□ -1.74
SDS22	YKL193C	RPS17B	P14127	136 aa	Known RBP	4.18	□□□□□ -1.74
SDS22	YKL193C	KIN82	P25341	720 aa		4.18	□□□□□ -1.74
SDS22	YKL193C	OAF3	P36023	863 aa		4.18	□□□□□ -1.74
SDS22	YKL193C	BUD8	P41698	603 aa		4.18	□□□□□ -1.74
SDS22	YKL193C	MNN11	P46985	422 aa	Known RBP	4.18	□□□□□ -1.74
SDS22	YKL193C	MPS3	P47069	682 aa		4.18	□□□□□ -1.74
SDS22	YKL193C	PIP2	P52960	996 aa		4.18	□□□□□ -1.74
SDS22	YKL193C	YHM2	Q04013	314 aa		4.18	□□□□□ -1.74
SDS22	YKL193C	YFT2	Q06676	274 aa		4.18	□□□□□ -1.74
SDS22	YKL193C	STP4	Q07351	490 aa		4.18	□□□□□ -1.74
SDS22	YKL193C	YDL086W	Q07505	273 aa		4.18	□□□□□ -1.74
SDS22	YKL193C	RPS21A	P0C0V8	87 aa	Known RBP	4.17	□□□□□ -1.74
SDS22	YKL193C	MSS1	P32559	526 aa	Predicted RBP	4.17	□□□□□ -1.74
SDS22	YKL193C	FAT1	P38225	669 aa		4.17	□□□□□ -1.74
SDS22	YKL193C	COS111	P38308	924 aa		4.17	□□□□□ -1.74
SDS22	YKL193C	ARG7	Q04728	441 aa		4.17	□□□□□ -1.74
SDS22	YKL193C	HFI1	Q12060	488 aa		4.17	□□□□□ -1.74
SDS22	YKL193C	FRE7	Q12333	620 aa		4.17	□□□□□ -1.74
SDS22	YKL193C	APM4	Q99186	491 aa		4.17	□□□□□ -1.74
SDS22	YKL193C	AIM44	Q99299	758 aa		4.17	□□□□□ -1.74
SDS22	YKL193C	TPK2	P06245	380 aa		4.16	□□□□□ -1.74
SDS22	YKL193C	GLN4	P13188	809 aa	Known RBP	4.16	□□□□□ -1.74
SDS22	YKL193C	ABF1	P14164	731 aa		4.16	□□□□□ -1.74
SDS22	YKL193C	SEC15	P22224	910 aa		4.16	□□□□□ -1.74
SDS22	YKL193C	CTP1	P38152	299 aa		4.16	□□□□□ -1.74
SDS22	YKL193C	UBP12	P39538	1254 aa		4.16	□□□□□ -1.74
SDS22	YKL193C	KHA1	P40309	873 aa		4.16	□□□□□ -1.74
SDS22	YKL193C	IES1	P43579	692 aa		4.16	□□□□□ -1.74
SDS22	YKL193C	PTA1	Q01329	785 aa	Predicted RBP	4.16	□□□□□ -1.74
SDS22	YKL193C	AI5_ALPHA	Q9ZZX1	630 aa		4.16	□□□□□ -1.74
SDS22	YKL193C	DID4	P36108	232 aa		4.15	□□□□□ -1.75
SDS22	YKL193C	DUN1	P39009	513 aa		4.15	□□□□□ -1.75
SDS22	YKL193C	PXA1	P41909	870 aa		4.15	□□□□□ -1.75
SDS22	YKL193C	CDC26	P14724	124 aa		4.14	□□□□□ -1.75
SDS22	YKL193C	PRP22	P24384	1145 aa	Known RBP	4.14	□□□□□ -1.75
SDS22	YKL193C	NTH1	P32356	751 aa		4.14	□□□□□ -1.75
SDS22	YKL193C	VID28	P40547	921 aa		4.14	□□□□□ -1.75
SDS22	YKL193C	TAF4	P50105	388 aa		4.14	□□□□□ -1.75
SDS22	YKL193C	YGL081W	P53156	320 aa		4.14	□□□□□ -1.75
SDS22	YKL193C	SPO1	P53541	631 aa		4.14	□□□□□ -1.75
SDS22	YKL193C	YSH1	Q06224	779 aa	Predicted RBP	4.14	□□□□□ -1.75
SDS22	YKL193C	MDM20	Q12387	796 aa	Known RBP	4.14	□□□□□ -1.75
SDS22	YKL193C	PRE4	P30657	266 aa		4.13	□□□□□ -1.75
SDS22	YKL193C	DAL3	P32459	195 aa		4.13	□□□□□ -1.75
SDS22	YKL193C	YEN1	P40028	759 aa		4.13	□□□□□ -1.75
SDS22	YKL193C	PMT6	P42934	759 aa		4.13	□□□□□ -1.75
SDS22	YKL193C	SNF12	P53628	566 aa		4.13	□□□□□ -1.75
SDS22	YKL193C	PPN1	Q04119	674 aa		4.13	□□□□□ -1.75
SDS22	YKL193C	IZH3	Q07959	543 aa		4.13	□□□□□ -1.75
SDS22	YKL193C	RKI1	Q12189	258 aa		4.13	□□□□□ -1.75
SDS22	YKL193C	AAD3	P25612	363 aa		4.12	□□□□□ -1.75
SDS22	YKL193C	SER1	P33330	395 aa	Known RBP	4.12	□□□□□ -1.75
SDS22	YKL193C	NSE5	Q03718	556 aa		4.12	□□□□□ -1.75
SDS22	YKL193C	TUP1	P16649	713 aa		4.11	□□□□□ -1.75
SDS22	YKL193C	MF(ALPHA)2	P32435	120 aa		4.11	□□□□□ -1.75
SDS22	YKL193C	GRX4	P32642	244 aa		4.11	□□□□□ -1.75
SDS22	YKL193C	ELF1	P36053	145 aa		4.11	□□□□□ -1.75
SDS22	YKL193C	APL3	P38065	1025 aa		4.11	□□□□□ -1.75
SDS22	YKL193C	CRG1	P38892	291 aa	RIP-Chip data	4.11	□□□□□ -1.75	not detected
SDS22	YKL193C	FTR1	P40088	404 aa		4.11	□□□□□ -1.75
SDS22	YKL193C	DIP5	P53388	608 aa		4.11	□□□□□ -1.75
SDS22	YKL193C	TIM50	Q02776	476 aa		4.11	□□□□□ -1.75
SDS22	YKL193C	YDR179W-A	Q03983	463 aa		4.11	□□□□□ -1.75
SDS22	YKL193C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
SDS22	YKL193C	HXT4	P32467	576 aa		4.1	□□□□□ -1.75
SDS22	YKL193C	MTC7	P32633	139 aa		4.1	□□□□□ -1.75
SDS22	YKL193C	CDS1	P38221	457 aa		4.1	□□□□□ -1.75
SDS22	YKL193C	TMN3	P40071	706 aa		4.1	□□□□□ -1.75
SDS22	YKL193C	PRM2	P40534	656 aa		4.1	□□□□□ -1.75
SDS22	YKL193C	FDC1	Q03034	503 aa		4.1	□□□□□ -1.75
SDS22	YKL193C	UFO1	Q04511	668 aa		4.1	□□□□□ -1.75
SDS22	YKL193C	LEU2	P04173	364 aa	Predicted RBP	4.09	□□□□□ -1.75
SDS22	YKL193C	EUG1	P32474	517 aa		4.09	□□□□□ -1.75
SDS22	YKL193C	YHR033W	P38690	423 aa		4.09	□□□□□ -1.75
SDS22	YKL193C	GPP2	P40106	250 aa	Known RBP	4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 62.9 ms