RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W PFF1P38244 976 aa8.31□□□□□ -1.08
UFD1YGR048W LYS14P40971 790 aa8.31□□□□□ -1.08
UFD1YGR048W FAR7P43592 221 aa8.31□□□□□ -1.08
UFD1YGR048W NMD5P46970 1048 aa8.31□□□□□ -1.08
UFD1YGR048W MDV1P47025 714 aa8.31□□□□□ -1.08
UFD1YGR048W IMD3P50095 523 aaKnown RBP8.31□□□□□ -1.08
UFD1YGR048W USE1P53146 245 aa8.31□□□□□ -1.08
UFD1YGR048W FCP1Q03254 732 aa8.31□□□□□ -1.08
UFD1YGR048W ABZ2Q03266 374 aa8.31□□□□□ -1.08
UFD1YGR048W MTC5Q03897 1148 aa8.31□□□□□ -1.08
UFD1YGR048W YDR444WQ04093 687 aa8.31□□□□□ -1.08
UFD1YGR048W TDA5Q06417 326 aaKnown RBP8.31□□□□□ -1.08
UFD1YGR048W YPR084WQ06821 456 aa8.31□□□□□ -1.08
UFD1YGR048W ACF2Q12168 779 aa8.31□□□□□ -1.08
UFD1YGR048W RAD61Q99359 647 aa8.31□□□□□ -1.08
UFD1YGR048W CDC6P09119 513 aa8.3□□□□□ -1.08
UFD1YGR048W ILS1P09436 1072 aaKnown RBP8.3□□□□□ -1.08
UFD1YGR048W ERG11P10614 530 aa8.3□□□□□ -1.08
UFD1YGR048W MSS116P15424 664 aaKnown RBP8.3□□□□□ -1.08
UFD1YGR048W PEX1P24004 1043 aa8.3□□□□□ -1.08
UFD1YGR048W SAS3P34218 831 aa8.3□□□□□ -1.08
UFD1YGR048W SPC42P36094 363 aa8.3□□□□□ -1.08
UFD1YGR048W NUP133P36161 1157 aa8.3□□□□□ -1.08
UFD1YGR048W GRX7P38068 203 aa8.3□□□□□ -1.08
UFD1YGR048W ATP3P38077 311 aaKnown RBP8.3□□□□□ -1.08
UFD1YGR048W GIP1P38229 639 aa8.3□□□□□ -1.08
UFD1YGR048W STN1P38960 494 aa8.3□□□□□ -1.08
UFD1YGR048W CCT6P39079 546 aa8.3□□□□□ -1.08
UFD1YGR048W FTR1P40088 404 aa8.3□□□□□ -1.08
UFD1YGR048W DPH1P40487 425 aaKnown RBP8.3□□□□□ -1.08
UFD1YGR048W TY4A-JP47023 414 aa8.3□□□□□ -1.08
UFD1YGR048W GDE1Q02979 1223 aa8.3□□□□□ -1.08
UFD1YGR048W DIG1Q03063 452 aaKnown RBP8.3□□□□□ -1.08
UFD1YGR048W YML020WQ03722 664 aa8.3□□□□□ -1.08
UFD1YGR048W FMN1Q03778 218 aa8.3□□□□□ -1.08
UFD1YGR048W RAD30Q04049 632 aa8.3□□□□□ -1.08
UFD1YGR048W SMP3Q04174 516 aa8.3□□□□□ -1.08
UFD1YGR048W RGA2Q06407 1009 aa8.3□□□□□ -1.08
UFD1YGR048W MLH2Q07980 695 aa8.3□□□□□ -1.08
UFD1YGR048W YAP7Q08182 245 aa8.3□□□□□ -1.08
UFD1YGR048W ATG29Q12092 213 aa8.3□□□□□ -1.08
UFD1YGR048W MNL2Q12205 849 aa8.3□□□□□ -1.08
UFD1YGR048W ARP6Q12509 438 aa8.3□□□□□ -1.08
UFD1YGR048W PTC5Q12511 572 aa8.3□□□□□ -1.08
UFD1YGR048W LCB1P25045 558 aaKnown RBP8.29□□□□□ -1.08
UFD1YGR048W RPC53P25441 422 aa8.29□□□□□ -1.08
UFD1YGR048W SUV3P32580 737 aa8.29□□□□□ -1.08
UFD1YGR048W MCD4P36051 919 aa8.29□□□□□ -1.08
UFD1YGR048W SLM4P38247 162 aa8.29□□□□□ -1.08
UFD1YGR048W LSM12P38828 187 aaKnown RBP8.29□□□□□ -1.08
UFD1YGR048W YER137CP40083 148 aaKnown RBP8.29□□□□□ -1.08
UFD1YGR048W RPT2P40327 437 aaKnown RBP8.29□□□□□ -1.08
UFD1YGR048W YFH7P43591 353 aa8.29□□□□□ -1.08
UFD1YGR048W YJR008WP47085 338 aa8.29□□□□□ -1.08
UFD1YGR048W BIR1P47134 954 aa8.29□□□□□ -1.08
UFD1YGR048W SSN8P47821 323 aa8.29□□□□□ -1.08
UFD1YGR048W ALT1P52893 592 aa8.29□□□□□ -1.08
UFD1YGR048W PAN2P53010 1115 aaPredicted RBP8.29□□□□□ -1.08
UFD1YGR048W YNL108CP53929 270 aa8.29□□□□□ -1.08
UFD1YGR048W ISU1Q03020 165 aa8.29□□□□□ -1.08
UFD1YGR048W URC2Q04411 772 aa8.29□□□□□ -1.08
UFD1YGR048W ADY3Q07732 790 aa8.29□□□□□ -1.08
UFD1YGR048W ALE1Q08548 619 aa8.29□□□□□ -1.08
UFD1YGR048W ENV9Q08651 330 aa8.29□□□□□ -1.08
UFD1YGR048W AIM41Q12032 185 aa8.29□□□□□ -1.08
UFD1YGR048W BAG7Q12128 409 aa8.29□□□□□ -1.08
UFD1YGR048W DBP10Q12389 995 aaKnown RBP8.29□□□□□ -1.08
UFD1YGR048W FAS2P19097 1887 aaKnown RBP8.28□□□□□ -1.08
UFD1YGR048W ILV2P07342 687 aaKnown RBP8.28□□□□□ -1.08
UFD1YGR048W FUS1P11710 512 aa8.28□□□□□ -1.08
UFD1YGR048W PEP5P12868 1029 aa8.28□□□□□ -1.08
UFD1YGR048W RED1P14291 827 aa8.28□□□□□ -1.08
UFD1YGR048W CAD1P24813 409 aaKnown RBP8.28□□□□□ -1.08
UFD1YGR048W SWI4P25302 1093 aaKnown RBP8.28□□□□□ -1.08
UFD1YGR048W YDJ1P25491 409 aaKnown RBP8.28□□□□□ -1.08
UFD1YGR048W ISF1P32488 338 aa8.28□□□□□ -1.08
UFD1YGR048W PEX5P35056 612 aa8.28□□□□□ -1.08
UFD1YGR048W NTR2P36118 322 aaPredicted RBP8.28□□□□□ -1.08
UFD1YGR048W YBL086CP38177 466 aa8.28□□□□□ -1.08
UFD1YGR048W RCK2P38623 610 aa8.28□□□□□ -1.08
UFD1YGR048W STP2P38704 541 aa8.28□□□□□ -1.08
UFD1YGR048W YER156CP40093 338 aaKnown RBP8.28□□□□□ -1.08
UFD1YGR048W ESL1P40456 1118 aa8.28□□□□□ -1.08
UFD1YGR048W ATG32P40458 529 aa8.28□□□□□ -1.08
UFD1YGR048W YFL034WP43564 1073 aa8.28□□□□□ -1.08
UFD1YGR048W IRC5P43610 853 aa8.28□□□□□ -1.08
UFD1YGR048W BNA3P47039 444 aaKnown RBP8.28□□□□□ -1.08
UFD1YGR048W PSP2P50109 593 aaKnown RBP8.28□□□□□ -1.08
UFD1YGR048W ATG1P53104 897 aa8.28□□□□□ -1.08
UFD1YGR048W MDM1Q01846 1127 aa8.28□□□□□ -1.08
UFD1YGR048W SHR3Q02774 210 aa8.28□□□□□ -1.08
UFD1YGR048W PNG1Q02890 363 aa8.28□□□□□ -1.08
UFD1YGR048W PMT7Q06644 662 aa8.28□□□□□ -1.08
UFD1YGR048W APC5Q08683 685 aa8.28□□□□□ -1.08
UFD1YGR048W YOR289WQ12012 251 aaPredicted RBP8.28□□□□□ -1.08
UFD1YGR048W VCX1Q99385 411 aa8.28□□□□□ -1.08
UFD1YGR048W EXO70P19658 623 aa8.27□□□□□ -1.09
UFD1YGR048W GLG1P36143 616 aa8.27□□□□□ -1.09
UFD1YGR048W ETR1P38071 380 aa8.27□□□□□ -1.09
UFD1YGR048W ECM2P38241 364 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 66.9 ms