RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W TY1B-MR1Q04214 1755 aa7.94□□□□□ -1.14
LCP5YER127W TY1B-MR2Q04670 1755 aaKnown RBP7.94□□□□□ -1.14
LCP5YER127W TY1B-LR1Q12088 1755 aaKnown RBP7.94□□□□□ -1.14
LCP5YER127W TY1B-NL1Q12112 1755 aa7.94□□□□□ -1.14
LCP5YER127W TY1B-GR1Q12141 1755 aa7.94□□□□□ -1.14
LCP5YER127W TY1B-BLQ12490 1755 aa7.94□□□□□ -1.14
LCP5YER127W ALG7P07286 448 aa7.93□□□□□ -1.14
LCP5YER127W PEX1P24004 1043 aa7.93□□□□□ -1.14
LCP5YER127W MVD1P32377 396 aaKnown RBP7.93□□□□□ -1.14
LCP5YER127W YHR033WP38690 423 aa7.93□□□□□ -1.14
LCP5YER127W FMO1P38866 432 aa7.93□□□□□ -1.14
LCP5YER127W TPM2P40414 161 aa7.93□□□□□ -1.14
LCP5YER127W BUD8P41698 603 aa7.93□□□□□ -1.14
LCP5YER127W ENP2P48234 707 aaKnown RBP7.93□□□□□ -1.14
LCP5YER127W HOL1P53389 586 aa7.93□□□□□ -1.14
LCP5YER127W IRC13Q08630 104 aa7.93□□□□□ -1.14
LCP5YER127W YOR378WQ08902 515 aa7.93□□□□□ -1.14
LCP5YER127W POM34Q12445 299 aa7.93□□□□□ -1.14
LCP5YER127W YEF3P16521 1044 aaKnown RBP7.92□□□□□ -1.14
LCP5YER127W IME1P21190 360 aa7.92□□□□□ -1.14
LCP5YER127W PRP22P24384 1145 aaKnown RBP7.92□□□□□ -1.14
LCP5YER127W KIN82P25341 720 aa7.92□□□□□ -1.14
LCP5YER127W CCT3P39077 534 aaKnown RBP7.92□□□□□ -1.14
LCP5YER127W TAF4P50105 388 aa7.92□□□□□ -1.14
LCP5YER127W PPN1Q04119 674 aa7.92□□□□□ -1.14
LCP5YER127W YLR040CQ07988 224 aa7.92□□□□□ -1.14
LCP5YER127W RPO21P04050 1733 aaKnown RBP7.92□□□□□ -1.14
LCP5YER127W ATP4P05626 244 aa7.91□□□□□ -1.14
LCP5YER127W MF(ALPHA)2P32435 120 aa7.91□□□□□ -1.14
LCP5YER127W SRP68P38687 599 aaKnown RBP7.91□□□□□ -1.14
LCP5YER127W BCD1P38772 366 aa7.91□□□□□ -1.14
LCP5YER127W REV7P38927 245 aa7.91□□□□□ -1.14
LCP5YER127W YJL163CP46996 555 aa7.91□□□□□ -1.14
LCP5YER127W GIP4P39732 760 aa7.9□□□□□ -1.14
LCP5YER127W EAF5P39995 279 aa7.9□□□□□ -1.14
LCP5YER127W UBC11P52492 156 aa7.9□□□□□ -1.14
LCP5YER127W ADY4Q05955 493 aa7.9□□□□□ -1.14
LCP5YER127W NUP170P38181 1502 aa7.89□□□□□ -1.15
LCP5YER127W YEL076C-AP0CX16 216 aa7.89□□□□□ -1.15
LCP5YER127W YLR464WP0CX17 216 aa7.89□□□□□ -1.15
LCP5YER127W ACO1P19414 778 aaKnown RBP RIP-Chip data7.89□□□□□ -1.15not detected
LCP5YER127W YPT7P32939 208 aa7.89□□□□□ -1.15
LCP5YER127W TRM2P33753 639 aa7.89□□□□□ -1.15
LCP5YER127W YEL076CP39971 216 aa7.89□□□□□ -1.15
LCP5YER127W MET14Q02196 202 aa7.89□□□□□ -1.15
LCP5YER127W NSE5Q03718 556 aa7.89□□□□□ -1.15
LCP5YER127W RGC1Q06108 1083 aaKnown RBP7.89□□□□□ -1.15
LCP5YER127W THI22Q06490 572 aa7.89□□□□□ -1.15
LCP5YER127W KCC4P25389 1037 aa7.88□□□□□ -1.15
LCP5YER127W PMI40P29952 429 aaKnown RBP7.88□□□□□ -1.15
LCP5YER127W SFB3P38810 929 aa7.88□□□□□ -1.15
LCP5YER127W IRC5P43610 853 aa7.88□□□□□ -1.15
LCP5YER127W OMS1Q06668 471 aa7.88□□□□□ -1.15
LCP5YER127W ZRT2Q12436 422 aa7.88□□□□□ -1.15
LCP5YER127W GAL1P04385 528 aa7.87□□□□□ -1.15
LCP5YER127W BCS1P32839 456 aa7.87□□□□□ -1.15
LCP5YER127W YKL133CP36066 463 aa7.87□□□□□ -1.15
LCP5YER127W YIL092WP40497 633 aa7.87□□□□□ -1.15
LCP5YER127W YIL077CP40508 320 aa7.87□□□□□ -1.15
LCP5YER127W YOL073CQ08232 322 aa7.87□□□□□ -1.15
LCP5YER127W PPR1P07272 904 aaPredicted RBP7.86□□□□□ -1.15
LCP5YER127W COS111P38308 924 aa7.86□□□□□ -1.15
LCP5YER127W PIG2P40187 538 aa7.86□□□□□ -1.15
LCP5YER127W PIP2P52960 996 aa7.86□□□□□ -1.15
LCP5YER127W PAN2P53010 1115 aaPredicted RBP7.86□□□□□ -1.15
LCP5YER127W SNQ2P32568 1501 aaKnown RBP7.86□□□□□ -1.15
LCP5YER127W FEN2P25621 512 aaKnown RBP7.85□□□□□ -1.15
LCP5YER127W PRE4P30657 266 aa7.85□□□□□ -1.15
LCP5YER127W PPS1P38148 807 aa7.85□□□□□ -1.15
LCP5YER127W STL1P39932 569 aa7.85□□□□□ -1.15
LCP5YER127W TAN1P53072 289 aaPredicted RBP7.85□□□□□ -1.15
LCP5YER127W KIN4Q01919 800 aa7.85□□□□□ -1.15
LCP5YER127W URN1Q06525 465 aaKnown RBP7.85□□□□□ -1.15
LCP5YER127W NUR1Q12066 484 aa7.85□□□□□ -1.15
LCP5YER127W YKL033W-AQ86ZR7 236 aa7.85□□□□□ -1.15
LCP5YER127W PTP2P29461 750 aa7.84□□□□□ -1.15
LCP5YER127W YKL222CP35995 705 aa7.84□□□□□ -1.15
LCP5YER127W FMP52P40008 231 aa7.84□□□□□ -1.15
LCP5YER127W SPO1P53541 631 aa7.84□□□□□ -1.15
LCP5YER127W SQS1P53866 767 aaKnown RBP7.84□□□□□ -1.15
LCP5YER127W MTD1Q02046 320 aaKnown RBP7.84□□□□□ -1.15
LCP5YER127W IRC20Q06554 1556 aa7.84□□□□□ -1.15
LCP5YER127W DNF2Q12675 1612 aa7.83□□□□□ -1.16
LCP5YER127W HRB1P38922 454 aaKnown RBP RIP-Chip data7.83□□□□□ -1.16not detected
LCP5YER127W AIM21P40563 679 aa7.83□□□□□ -1.16
LCP5YER127W SUN4P53616 420 aa7.83□□□□□ -1.16
LCP5YER127W CNM67P53865 581 aaKnown RBP7.83□□□□□ -1.16
LCP5YER127W YMR206WQ03695 313 aa7.83□□□□□ -1.16
LCP5YER127W MLC2Q06580 163 aa7.83□□□□□ -1.16
LCP5YER127W YFT2Q06676 274 aa7.83□□□□□ -1.16
LCP5YER127W TUB2P02557 457 aaKnown RBP7.82□□□□□ -1.16
LCP5YER127W RIM4P38741 713 aa7.82□□□□□ -1.16
LCP5YER127W SAW1P39735 261 aa7.82□□□□□ -1.16
LCP5YER127W PRM2P40534 656 aa7.82□□□□□ -1.16
LCP5YER127W HIS6P40545 261 aa7.82□□□□□ -1.16
LCP5YER127W RFX1P48743 811 aa7.82□□□□□ -1.16
LCP5YER127W CHS5Q12114 671 aaKnown RBP7.82□□□□□ -1.16
LCP5YER127W TRM3Q07527 1436 aa7.81□□□□□ -1.16
LCP5YER127W PRP28P23394 588 aa7.81□□□□□ -1.16
LCP5YER127W PHO3P24031 467 aa7.81□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 110.5 ms