RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W MAL31P38156 614 aa5.58□□□□□ -1.52
UBP9YER098W EAF5P39995 279 aa5.58□□□□□ -1.52
UBP9YER098W APT1P49435 187 aaKnown RBP5.58□□□□□ -1.52
UBP9YER098W HOL1P53389 586 aa5.58□□□□□ -1.52
UBP9YER098W SDH1Q00711 640 aa5.58□□□□□ -1.52
UBP9YER098W CMS1Q07897 291 aaKnown RBP5.58□□□□□ -1.52
UBP9YER098W CWC2Q12046 339 aaPredicted RBP5.58□□□□□ -1.52
UBP9YER098W OSW2Q12202 724 aa5.58□□□□□ -1.52
UBP9YER098W DNF3Q12674 1656 aa5.57□□□□□ -1.52
UBP9YER098W BNR1P40450 1375 aa5.57□□□□□ -1.52
UBP9YER098W JIP3O13555 125 aa5.57□□□□□ -1.52
UBP9YER098W GLN4P13188 809 aaKnown RBP5.57□□□□□ -1.52
UBP9YER098W GFA1P14742 717 aaKnown RBP5.57□□□□□ -1.52
UBP9YER098W PHO3P24031 467 aa5.57□□□□□ -1.52
UBP9YER098W APL2P36000 726 aaPredicted RBP5.57□□□□□ -1.52
UBP9YER098W CCZ1P38273 704 aa5.57□□□□□ -1.52
UBP9YER098W CTF18P49956 741 aa5.57□□□□□ -1.52
UBP9YER098W TSR2Q06672 205 aaKnown RBP5.57□□□□□ -1.52
UBP9YER098W CLF1Q12309 687 aaPredicted RBP5.57□□□□□ -1.52
UBP9YER098W NHA1Q99271 985 aa5.57□□□□□ -1.52
UBP9YER098W CDC31P06704 161 aaKnown RBP5.57□□□□□ -1.52
UBP9YER098W RPS4AP0CX35 261 aaKnown RBP5.57□□□□□ -1.52
UBP9YER098W RPS4BP0CX36 261 aaKnown RBP5.57□□□□□ -1.52
UBP9YER098W UBC1P21734 215 aaKnown RBP5.57□□□□□ -1.52
UBP9YER098W FLR1P38124 548 aa5.57□□□□□ -1.52
UBP9YER098W RRM3P38766 723 aa5.57□□□□□ -1.52
UBP9YER098W CCT4P39078 528 aaKnown RBP5.57□□□□□ -1.52
UBP9YER098W SAW1P39735 261 aa5.57□□□□□ -1.52
UBP9YER098W BFA1P47113 574 aa5.57□□□□□ -1.52
UBP9YER098W ARP4P80428 489 aa5.57□□□□□ -1.52
UBP9YER098W YKR011CQ02209 353 aa5.57□□□□□ -1.52
UBP9YER098W YPL277CQ08989 487 aa5.57□□□□□ -1.52
UBP9YER098W HAL9Q12180 1030 aa5.57□□□□□ -1.52
UBP9YER098W MED1Q12321 566 aa5.57□□□□□ -1.52
UBP9YER098W SWI1P09547 1314 aa5.56□□□□□ -1.52
UBP9YER098W PRP16P15938 1071 aaPredicted RBP5.56□□□□□ -1.52
UBP9YER098W RDS1P25611 832 aa5.56□□□□□ -1.52
UBP9YER098W PSO2P30620 661 aa5.56□□□□□ -1.52
UBP9YER098W RPD3P32561 433 aa5.56□□□□□ -1.52
UBP9YER098W ECM21P38167 1117 aaKnown RBP5.56□□□□□ -1.52
UBP9YER098W ESL1P40456 1118 aa5.56□□□□□ -1.52
UBP9YER098W SRB7P47822 140 aa5.56□□□□□ -1.52
UBP9YER098W PCL10P53124 433 aa5.56□□□□□ -1.52
UBP9YER098W NDL1Q06568 189 aa5.56□□□□□ -1.52
UBP9YER098W NSI1Q12457 570 aa5.56□□□□□ -1.52
UBP9YER098W SMC6Q12749 1114 aa5.56□□□□□ -1.52
UBP9YER098W PRE10P21242 288 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
UBP9YER098W MRPS28P21771 286 aa5.55□□□□□ -1.52
UBP9YER098W IMP2'P32351 346 aa5.55□□□□□ -1.52
UBP9YER098W SHM2P37291 469 aaKnown RBP5.55□□□□□ -1.52
UBP9YER098W TOM71P38825 639 aaKnown RBP5.55□□□□□ -1.52
UBP9YER098W VID28P40547 921 aa5.55□□□□□ -1.52
UBP9YER098W YIR007WP40566 764 aa5.55□□□□□ -1.52
UBP9YER098W THI21Q08975 551 aa5.55□□□□□ -1.52
UBP9YER098W SVS1Q12254 260 aa5.55□□□□□ -1.52
UBP9YER098W CPA2P03965 1118 aaKnown RBP5.55□□□□□ -1.52
UBP9YER098W SWI6P09959 803 aa5.55□□□□□ -1.52
UBP9YER098W KRS1P15180 591 aaKnown RBP5.55□□□□□ -1.52
UBP9YER098W STE11P23561 717 aa5.55□□□□□ -1.52
UBP9YER098W RER1P25560 188 aa5.55□□□□□ -1.52
UBP9YER098W TYE7P33122 291 aaPredicted RBP5.55□□□□□ -1.52
UBP9YER098W STE13P33894 931 aa5.55□□□□□ -1.52
UBP9YER098W POA1P38218 177 aa5.55□□□□□ -1.52
UBP9YER098W SSZ1P38788 538 aaKnown RBP5.55□□□□□ -1.52
UBP9YER098W SEC9P40357 651 aa5.55□□□□□ -1.52
UBP9YER098W ZIP2P53061 704 aa5.55□□□□□ -1.52
UBP9YER098W SEC5P89102 971 aa5.55□□□□□ -1.52
UBP9YER098W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
UBP9YER098W ATG23Q06671 453 aa5.55□□□□□ -1.52
UBP9YER098W ATG9Q12142 997 aa5.55□□□□□ -1.52
UBP9YER098W TY1A-NL1Q12391 440 aaKnown RBP5.55□□□□□ -1.52
UBP9YER098W ARP7Q12406 477 aa5.55□□□□□ -1.52
UBP9YER098W DDP1Q99321 188 aaKnown RBP5.55□□□□□ -1.52
UBP9YER098W CDC16P09798 840 aa5.54□□□□□ -1.52
UBP9YER098W CDC26P14724 124 aa5.54□□□□□ -1.52
UBP9YER098W RPO26P20435 155 aa5.54□□□□□ -1.52
UBP9YER098W YHL012WP38709 493 aa5.54□□□□□ -1.52
UBP9YER098W CAJ1P39101 391 aa5.54□□□□□ -1.52
UBP9YER098W IAH1P41734 238 aa5.54□□□□□ -1.52
UBP9YER098W YJR039WP47107 1121 aa5.54□□□□□ -1.52
UBP9YER098W PUS2P53167 370 aa5.54□□□□□ -1.52
UBP9YER098W BET4Q00618 327 aa5.54□□□□□ -1.52
UBP9YER098W NGL1Q08213 363 aaKnown RBP5.54□□□□□ -1.52
UBP9YER098W SNU66Q12420 587 aaPredicted RBP5.54□□□□□ -1.52
UBP9YER098W RAD1P06777 1100 aa5.54□□□□□ -1.52
UBP9YER098W ARD1P07347 238 aaPredicted RBP5.54□□□□□ -1.52
UBP9YER098W HXT4P32467 576 aa5.54□□□□□ -1.52
UBP9YER098W SKI2P35207 1287 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
UBP9YER098W RRN3P36070 627 aa5.54□□□□□ -1.52
UBP9YER098W MUD2P36084 527 aaKnown RBP5.54□□□□□ -1.52
UBP9YER098W APM3P38153 483 aa5.54□□□□□ -1.52
UBP9YER098W SPC72P39723 622 aa5.54□□□□□ -1.52
UBP9YER098W INP52P50942 1183 aa5.54□□□□□ -1.52
UBP9YER098W CAF130P53280 1122 aaPredicted RBP5.54□□□□□ -1.52
UBP9YER098W NOP15P53927 220 aaPredicted RBP5.54□□□□□ -1.52
UBP9YER098W RSB1Q08417 382 aa5.54□□□□□ -1.52
UBP9YER098W MCH5Q08777 521 aa5.54□□□□□ -1.52
UBP9YER098W KCS1Q12494 1050 aa5.54□□□□□ -1.52
UBP9YER098W CDC37P06101 506 aaKnown RBP5.53□□□□□ -1.52
UBP9YER098W SAM35P14693 329 aa5.53□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms