RNA–Protein interactions for RNA: YEL047C

FRD1, Transcript of Soluble fumarate reductase, yeast

Gene FRD1, Length 1,413 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRD1	YEL047C	APC5	Q08683	685 aa		11.98	□□□□□ -0.49
FRD1	YEL047C	SPE3	Q12074	293 aa	Known RBP	11.98	□□□□□ -0.49
FRD1	YEL047C	VPS5	Q92331	675 aa		11.98	□□□□□ -0.49
FRD1	YEL047C	CCH1	P50077	2039 aa		11.98	□□□□□ -0.49
FRD1	YEL047C	GFA1	P14742	717 aa	Known RBP	11.97	□□□□□ -0.49
FRD1	YEL047C	CKI1	P20485	582 aa		11.97	□□□□□ -0.49
FRD1	YEL047C	ISF1	P32488	338 aa		11.97	□□□□□ -0.49
FRD1	YEL047C	SSP1	P38871	571 aa		11.97	□□□□□ -0.49
FRD1	YEL047C	NUP60	P39705	539 aa		11.97	□□□□□ -0.49
FRD1	YEL047C	SPC72	P39723	622 aa		11.97	□□□□□ -0.49
FRD1	YEL047C	KHA1	P40309	873 aa		11.97	□□□□□ -0.49
FRD1	YEL047C	NOG2	P53742	486 aa	Known RBP	11.97	□□□□□ -0.49
FRD1	YEL047C	INA17	Q02888	182 aa		11.97	□□□□□ -0.49
FRD1	YEL047C	PML39	Q03760	334 aa		11.97	□□□□□ -0.49
FRD1	YEL047C	YMR114C	Q04471	368 aa	Known RBP	11.97	□□□□□ -0.49
FRD1	YEL047C	LCB4	Q12246	624 aa		11.97	□□□□□ -0.49
FRD1	YEL047C	ARP7	Q12406	477 aa		11.97	□□□□□ -0.49
FRD1	YEL047C	KEX2	P13134	814 aa		11.96	□□□□□ -0.49
FRD1	YEL047C	SWC5	P38326	303 aa		11.96	□□□□□ -0.49
FRD1	YEL047C	RCK2	P38623	610 aa		11.96	□□□□□ -0.49
FRD1	YEL047C	TMA108	P40462	946 aa		11.96	□□□□□ -0.49
FRD1	YEL047C	NSE5	Q03718	556 aa		11.96	□□□□□ -0.49
FRD1	YEL047C	UFO1	Q04511	668 aa		11.96	□□□□□ -0.49
FRD1	YEL047C	IVY1	Q04934	453 aa		11.96	□□□□□ -0.49
FRD1	YEL047C	YLR462W	O13556	202 aa		11.95	□□□□□ -0.5
FRD1	YEL047C	RAM1	P22007	431 aa		11.95	□□□□□ -0.5
FRD1	YEL047C	PPH22	P23595	377 aa		11.95	□□□□□ -0.5
FRD1	YEL047C	PPZ1	P26570	692 aa		11.95	□□□□□ -0.5
FRD1	YEL047C	YHL049C	P38722	271 aa		11.95	□□□□□ -0.5
FRD1	YEL047C	LYS9	P38999	446 aa		11.95	□□□□□ -0.5
FRD1	YEL047C	LCP5	P40079	357 aa	Predicted RBP	11.95	□□□□□ -0.5
FRD1	YEL047C	YFL064C	P43540	174 aa		11.95	□□□□□ -0.5
FRD1	YEL047C	KTR6	P54070	446 aa		11.95	□□□□□ -0.5
FRD1	YEL047C	BET4	Q00618	327 aa		11.95	□□□□□ -0.5
FRD1	YEL047C	RKM2	Q03942	479 aa		11.95	□□□□□ -0.5
FRD1	YEL047C	SML1	Q04964	104 aa		11.95	□□□□□ -0.5
FRD1	YEL047C	MCM16	Q12262	181 aa		11.95	□□□□□ -0.5
FRD1	YEL047C	LPX1	Q12405	387 aa	Known RBP	11.95	□□□□□ -0.5
FRD1	YEL047C	YBL111C	Q3E7Y5	667 aa		11.95	□□□□□ -0.5
FRD1	YEL047C	CCP1	P00431	361 aa		11.94	□□□□□ -0.5
FRD1	YEL047C	MTF1	P14908	341 aa	Known RBP	11.94	□□□□□ -0.5
FRD1	YEL047C	PAP1	P29468	568 aa	Known RBP	11.94	□□□□□ -0.5
FRD1	YEL047C	YBL055C	P34220	418 aa	Predicted RBP	11.94	□□□□□ -0.5
FRD1	YEL047C	COY1	P34237	679 aa		11.94	□□□□□ -0.5
FRD1	YEL047C	SAP185	P40856	1058 aa		11.94	□□□□□ -0.5
FRD1	YEL047C	CDC55	Q00362	526 aa		11.94	□□□□□ -0.5
FRD1	YEL047C	LEE1	Q02799	301 aa	Known RBP	11.94	□□□□□ -0.5
FRD1	YEL047C	PIR3	Q03180	325 aa		11.94	□□□□□ -0.5
FRD1	YEL047C	AIM32	Q04689	311 aa		11.94	□□□□□ -0.5
FRD1	YEL047C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	11.94	□□□□□ -0.5	not detected
FRD1	YEL047C	CAP1	P28495	268 aa	Known RBP	11.94	□□□□□ -0.5
FRD1	YEL047C	HSP78	P33416	811 aa		11.94	□□□□□ -0.5
FRD1	YEL047C	YKL097C	P34245	136 aa		11.94	□□□□□ -0.5
FRD1	YEL047C	PMC1	P38929	1173 aa	Predicted RBP	11.94	□□□□□ -0.5
FRD1	YEL047C	YNL040W	P53960	456 aa	Predicted RBP	11.94	□□□□□ -0.5
FRD1	YEL047C	YDR344C	Q05510	147 aa		11.94	□□□□□ -0.5
FRD1	YEL047C	YOR387C	Q08910	206 aa		11.94	□□□□□ -0.5
FRD1	YEL047C	BET2	P20133	325 aa		11.93	□□□□□ -0.5
FRD1	YEL047C	STE11	P23561	717 aa		11.93	□□□□□ -0.5
FRD1	YEL047C	YIH1	P25637	258 aa		11.93	□□□□□ -0.5
FRD1	YEL047C	PMT7	Q06644	662 aa		11.93	□□□□□ -0.5
FRD1	YEL047C	THI21	Q08975	551 aa		11.93	□□□□□ -0.5
FRD1	YEL047C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	11.93	□□□□□ -0.5	not detected
FRD1	YEL047C	SIR1	P21691	654 aa		11.92	□□□□□ -0.5
FRD1	YEL047C	ECM13	P38195	257 aa		11.92	□□□□□ -0.5
FRD1	YEL047C	SMF1	P38925	575 aa		11.92	□□□□□ -0.5
FRD1	YEL047C	LSB6	P42951	607 aa		11.92	□□□□□ -0.5
FRD1	YEL047C	SPO21	Q12411	609 aa		11.92	□□□□□ -0.5
FRD1	YEL047C	RAD10	P06838	210 aa		11.91	□□□□□ -0.5
FRD1	YEL047C	IMG2	P25642	146 aa	Predicted RBP	11.91	□□□□□ -0.5
FRD1	YEL047C	HXT3	P32466	567 aa	Known RBP	11.91	□□□□□ -0.5
FRD1	YEL047C	YIL161W	P40449	235 aa	Known RBP	11.91	□□□□□ -0.5
FRD1	YEL047C	COQ6	P53318	479 aa		11.91	□□□□□ -0.5
FRD1	YEL047C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	11.91	□□□□□ -0.5	not detected
FRD1	YEL047C	ARA2	Q04212	335 aa		11.91	□□□□□ -0.5
FRD1	YEL047C	KAP95	Q06142	861 aa	Known RBP	11.91	□□□□□ -0.5
FRD1	YEL047C	AAD4	Q07747	329 aa		11.91	□□□□□ -0.5
FRD1	YEL047C	CIR2	Q08822	631 aa		11.91	□□□□□ -0.5
FRD1	YEL047C	YPK1	P12688	680 aa	Known RBP	11.9	□□□□□ -0.5
FRD1	YEL047C	MET16	P18408	261 aa	Predicted RBP	11.9	□□□□□ -0.5
FRD1	YEL047C	ERP2	P39704	215 aa		11.9	□□□□□ -0.5
FRD1	YEL047C	NDC80	P40460	691 aa		11.9	□□□□□ -0.5
FRD1	YEL047C	MKT1	P40850	830 aa	Known RBP	11.9	□□□□□ -0.5
FRD1	YEL047C	UFE1	P41834	346 aa		11.9	□□□□□ -0.5
FRD1	YEL047C	PEX31	P53203	462 aa		11.9	□□□□□ -0.5
FRD1	YEL047C	CWC22	P53333	577 aa	Known RBP	11.9	□□□□□ -0.5
FRD1	YEL047C	YNL108C	P53929	270 aa		11.9	□□□□□ -0.5
FRD1	YEL047C	RAD59	Q12223	238 aa		11.9	□□□□□ -0.5
FRD1	YEL047C	SVS1	Q12254	260 aa		11.9	□□□□□ -0.5
FRD1	YEL047C	ENO2	P00925	437 aa	Known RBP	11.89	□□□□□ -0.51
FRD1	YEL047C	PDR1	P12383	1068 aa		11.89	□□□□□ -0.51
FRD1	YEL047C	MEI4	P29467	408 aa		11.89	□□□□□ -0.51
FRD1	YEL047C	URA8	P38627	578 aa	Predicted RBP	11.89	□□□□□ -0.51
FRD1	YEL047C	CNN1	P43618	361 aa		11.89	□□□□□ -0.51
FRD1	YEL047C	TRM112	P53738	135 aa	Predicted RBP	11.89	□□□□□ -0.51
FRD1	YEL047C	TMN2	Q04562	672 aa		11.89	□□□□□ -0.51
FRD1	YEL047C	POB3	Q04636	552 aa	Known RBP	11.89	□□□□□ -0.51
FRD1	YEL047C	ESC2	Q06340	456 aa		11.89	□□□□□ -0.51
FRD1	YEL047C	PMS1	P14242	873 aa		11.88	□□□□□ -0.51
FRD1	YEL047C	ALY2	P47029	1046 aa		11.88	□□□□□ -0.51

Retrieved 100 of 5,963 RNA–protein pairs in 35 ms