RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT3YDR394W CPR7P47103 393 aa6.38□□□□□ -1.39
RPT3YDR394W HSH155P49955 971 aaKnown RBP6.38□□□□□ -1.39
RPT3YDR394W UTP6Q02354 440 aaKnown RBP6.38□□□□□ -1.39
RPT3YDR394W IWR1Q07532 353 aaPredicted RBP6.38□□□□□ -1.39
RPT3YDR394W CFT2Q12102 859 aaPredicted RBP6.38□□□□□ -1.39
RPT3YDR394W YOL087CQ99247 1116 aa6.38□□□□□ -1.39
RPT3YDR394W FKS1P38631 1876 aaKnown RBP6.37□□□□□ -1.39
RPT3YDR394W ADE3P07245 946 aaKnown RBP6.37□□□□□ -1.39
RPT3YDR394W SFL1P20134 766 aa6.37□□□□□ -1.39
RPT3YDR394W DAL2P25335 343 aa6.37□□□□□ -1.39
RPT3YDR394W EFT1P32324 842 aaKnown RBP6.37□□□□□ -1.39
RPT3YDR394W PLC1P32383 869 aa6.37□□□□□ -1.39
RPT3YDR394W DBP7P36120 742 aaKnown RBP6.37□□□□□ -1.39
RPT3YDR394W RPC37P36121 282 aa6.37□□□□□ -1.39
RPT3YDR394W TFA2P36145 328 aa6.37□□□□□ -1.39
RPT3YDR394W MRX3P38172 270 aa6.37□□□□□ -1.39
RPT3YDR394W GDT1P38301 280 aaPredicted RBP6.37□□□□□ -1.39
RPT3YDR394W EAF5P39995 279 aa6.37□□□□□ -1.39
RPT3YDR394W KAP123P40069 1113 aaKnown RBP6.37□□□□□ -1.39
RPT3YDR394W TED1P40533 473 aa6.37□□□□□ -1.39
RPT3YDR394W INP51P40559 946 aaKnown RBP6.37□□□□□ -1.39
RPT3YDR394W INA22P40576 216 aa6.37□□□□□ -1.39
RPT3YDR394W NMD5P46970 1048 aa6.37□□□□□ -1.39
RPT3YDR394W ASN1P49089 572 aaKnown RBP6.37□□□□□ -1.39
RPT3YDR394W CUL3P53202 744 aa6.37□□□□□ -1.39
RPT3YDR394W SOK2P53438 785 aaPredicted RBP6.37□□□□□ -1.39
RPT3YDR394W YNL146WP53906 100 aa6.37□□□□□ -1.39
RPT3YDR394W YMR102CQ03177 834 aa6.37□□□□□ -1.39
RPT3YDR394W PPM1Q04081 328 aa6.37□□□□□ -1.39
RPT3YDR394W YDR222WQ04925 415 aa6.37□□□□□ -1.39
RPT3YDR394W ECM7Q06200 448 aa6.37□□□□□ -1.39
RPT3YDR394W SEY1Q99287 776 aa6.37□□□□□ -1.39
RPT3YDR394W AI3P03877 415 aa6.36□□□□□ -1.39
RPT3YDR394W ARG4P04076 463 aaPredicted RBP6.36□□□□□ -1.39
RPT3YDR394W PMS1P14242 873 aa6.36□□□□□ -1.39
RPT3YDR394W CDC42P19073 191 aa6.36□□□□□ -1.39
RPT3YDR394W COX11P19516 300 aaKnown RBP6.36□□□□□ -1.39
RPT3YDR394W CDC10P25342 322 aaKnown RBP6.36□□□□□ -1.39
RPT3YDR394W ILV6P25605 309 aaKnown RBP6.36□□□□□ -1.39
RPT3YDR394W CAP1P28495 268 aaKnown RBP6.36□□□□□ -1.39
RPT3YDR394W YBL055CP34220 418 aaPredicted RBP6.36□□□□□ -1.39
RPT3YDR394W SQT1P35184 431 aa6.36□□□□□ -1.39
RPT3YDR394W OAF3P36023 863 aa6.36□□□□□ -1.39
RPT3YDR394W ECM2P38241 364 aaKnown RBP6.36□□□□□ -1.39
RPT3YDR394W YSW1P38280 609 aa6.36□□□□□ -1.39
RPT3YDR394W CCT2P39076 527 aaKnown RBP6.36□□□□□ -1.39
RPT3YDR394W GIP2P40036 548 aa6.36□□□□□ -1.39
RPT3YDR394W SMX2P40204 77 aaKnown RBP6.36□□□□□ -1.39
RPT3YDR394W AIM21P40563 679 aa6.36□□□□□ -1.39
RPT3YDR394W SCD6P45978 349 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39 RIP-Chip
RPT3YDR394W YGR130CP53278 816 aa6.36□□□□□ -1.39
RPT3YDR394W YML119WQ03208 357 aa6.36□□□□□ -1.39
RPT3YDR394W DUS4Q06063 367 aa6.36□□□□□ -1.39
RPT3YDR394W GPI13Q07830 1017 aa6.36□□□□□ -1.39
RPT3YDR394W AI5_BETAQ9ZZX0 354 aa6.36□□□□□ -1.39
RPT3YDR394W PYC1P11154 1178 aaKnown RBP6.35□□□□□ -1.39
RPT3YDR394W FUS1P11710 512 aa6.35□□□□□ -1.39
RPT3YDR394W SPO16P17122 198 aa6.35□□□□□ -1.39
RPT3YDR394W RNR1P21524 888 aaKnown RBP6.35□□□□□ -1.39
RPT3YDR394W CDC11P32458 415 aa6.35□□□□□ -1.39
RPT3YDR394W GCD6P32501 712 aaKnown RBP6.35□□□□□ -1.39
RPT3YDR394W TIM23P32897 222 aa6.35□□□□□ -1.39
RPT3YDR394W LOS1P33418 1100 aaPredicted RBP6.35□□□□□ -1.39
RPT3YDR394W IRS4P36115 615 aaKnown RBP6.35□□□□□ -1.39
RPT3YDR394W PNT1P38969 423 aa6.35□□□□□ -1.39
RPT3YDR394W ASG1P40467 964 aa6.35□□□□□ -1.39
RPT3YDR394W QDR1P40475 563 aa6.35□□□□□ -1.39
RPT3YDR394W DAS1P47005 663 aa6.35□□□□□ -1.39
RPT3YDR394W ORC5P50874 479 aa6.35□□□□□ -1.39
RPT3YDR394W ATG1P53104 897 aa6.35□□□□□ -1.39
RPT3YDR394W DRN1P53255 507 aaKnown RBP6.35□□□□□ -1.39
RPT3YDR394W CPR6P53691 371 aaKnown RBP6.35□□□□□ -1.39
RPT3YDR394W BIO5P53744 561 aaKnown RBP6.35□□□□□ -1.39
RPT3YDR394W SHR3Q02774 210 aa6.35□□□□□ -1.39
RPT3YDR394W SLD5Q03406 294 aa6.35□□□□□ -1.39
RPT3YDR394W YMR321CQ04898 105 aa6.35□□□□□ -1.39
RPT3YDR394W HFI1Q12060 488 aa6.35□□□□□ -1.39
RPT3YDR394W TY4B-PA0A0B7P3V8 1104 aa6.34□□□□□ -1.39
RPT3YDR394W TUB3P09734 445 aaKnown RBP6.34□□□□□ -1.39
RPT3YDR394W YML002WP0CF17 737 aa6.34□□□□□ -1.39
RPT3YDR394W YER152CP10356 443 aa6.34□□□□□ -1.39
RPT3YDR394W PRE10P21242 288 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
RPT3YDR394W KIN82P25341 720 aa6.34□□□□□ -1.39
RPT3YDR394W YCR051WP25631 222 aa6.34□□□□□ -1.39
RPT3YDR394W CBF2P32504 956 aa6.34□□□□□ -1.39
RPT3YDR394W ABD1P32783 436 aaPredicted RBP6.34□□□□□ -1.39
RPT3YDR394W MMS4P38257 691 aa6.34□□□□□ -1.39
RPT3YDR394W MSG5P38590 489 aa6.34□□□□□ -1.39
RPT3YDR394W LSB6P42951 607 aa6.34□□□□□ -1.39
RPT3YDR394W URB2P47108 1174 aa6.34□□□□□ -1.39
RPT3YDR394W PUS2P53167 370 aa6.34□□□□□ -1.39
RPT3YDR394W UFO1Q04511 668 aa6.34□□□□□ -1.39
RPT3YDR394W TAF10Q12030 206 aa6.34□□□□□ -1.39
RPT3YDR394W SGT2Q12118 346 aaKnown RBP6.34□□□□□ -1.39
RPT3YDR394W YLL058WQ12198 575 aa6.34□□□□□ -1.39
RPT3YDR394W TY4A-HQ6Q5P6 413 aa6.34□□□□□ -1.39
RPT3YDR394W ECM3Q99252 613 aa6.34□□□□□ -1.39
RPT3YDR394W EST1P17214 699 aaPredicted RBP6.33□□□□□ -1.4
RPT3YDR394W IME1P21190 360 aa6.33□□□□□ -1.4
RPT3YDR394W TMT1P32643 299 aa6.33□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 190.2 ms