RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W ABF1P14164 731 aa3.45□□□□□ -1.86
SSF2YDR312W IME1P21190 360 aa3.45□□□□□ -1.86
SSF2YDR312W FEN2P25621 512 aaKnown RBP3.45□□□□□ -1.86
SSF2YDR312W DID4P36108 232 aa3.45□□□□□ -1.86
SSF2YDR312W BIT61P47041 543 aa3.45□□□□□ -1.86
SSF2YDR312W STP4Q07351 490 aa3.45□□□□□ -1.86
SSF2YDR312W RPS17AP02407 136 aaKnown RBP3.44□□□□□ -1.86
SSF2YDR312W RPS17BP14127 136 aaKnown RBP3.44□□□□□ -1.86
SSF2YDR312W KCC4P25389 1037 aa3.44□□□□□ -1.86
SSF2YDR312W EUG1P32474 517 aa3.44□□□□□ -1.86
SSF2YDR312W MUP3P38734 546 aa3.44□□□□□ -1.86
SSF2YDR312W PAC2P39937 518 aa3.44□□□□□ -1.86
SSF2YDR312W BUD8P41698 603 aa3.44□□□□□ -1.86
SSF2YDR312W MPS3P47069 682 aa3.44□□□□□ -1.86
SSF2YDR312W YJR120WP47157 116 aa3.44□□□□□ -1.86
SSF2YDR312W YDL086WQ07505 273 aa3.44□□□□□ -1.86
SSF2YDR312W POM34Q12445 299 aa3.44□□□□□ -1.86
SSF2YDR312W TMA17Q12513 150 aa3.44□□□□□ -1.86
SSF2YDR312W APM4Q99186 491 aa3.44□□□□□ -1.86
SSF2YDR312W SER1P33330 395 aaKnown RBP3.43□□□□□ -1.86
SSF2YDR312W KSP1P38691 1029 aaKnown RBP3.43□□□□□ -1.86
SSF2YDR312W YHR097CP38809 366 aaKnown RBP3.43□□□□□ -1.86
SSF2YDR312W GPP2P40106 250 aaKnown RBP3.43□□□□□ -1.86
SSF2YDR312W YIL077CP40508 320 aa3.43□□□□□ -1.86
SSF2YDR312W VID28P40547 921 aa3.43□□□□□ -1.86
SSF2YDR312W RFX1P48743 811 aa3.43□□□□□ -1.86
SSF2YDR312W MRK1P50873 501 aa3.43□□□□□ -1.86
SSF2YDR312W PTA1Q01329 785 aaPredicted RBP3.43□□□□□ -1.86
SSF2YDR312W VBA4Q04602 768 aaKnown RBP3.43□□□□□ -1.86
SSF2YDR312W THI7Q05998 598 aa3.43□□□□□ -1.86
SSF2YDR312W BMS1Q08965 1183 aaKnown RBP3.43□□□□□ -1.86
SSF2YDR312W SCC2Q04002 1493 aa3.43□□□□□ -1.86
SSF2YDR312W RPS9BP05755 195 aaKnown RBP3.42□□□□□ -1.86
SSF2YDR312W CDC26P14724 124 aa3.42□□□□□ -1.86
SSF2YDR312W MDM10P18409 493 aa3.42□□□□□ -1.86
SSF2YDR312W CTP1P38152 299 aa3.42□□□□□ -1.86
SSF2YDR312W COS111P38308 924 aa3.42□□□□□ -1.86
SSF2YDR312W DUN1P39009 513 aa3.42□□□□□ -1.86
SSF2YDR312W KHA1P40309 873 aa3.42□□□□□ -1.86
SSF2YDR312W IES1P43579 692 aa3.42□□□□□ -1.86
SSF2YDR312W DUG1P43616 481 aaKnown RBP3.42□□□□□ -1.86
SSF2YDR312W SPC98P53540 846 aa3.42□□□□□ -1.86
SSF2YDR312W YFT2Q06676 274 aa3.42□□□□□ -1.86
SSF2YDR312W TRM732Q03496 1420 aa3.42□□□□□ -1.86
SSF2YDR312W SEC15P22224 910 aa3.41□□□□□ -1.86
SSF2YDR312W VPS34P22543 875 aa3.41□□□□□ -1.86
SSF2YDR312W KIN82P25341 720 aa3.41□□□□□ -1.86
SSF2YDR312W MSS1P32559 526 aaPredicted RBP3.41□□□□□ -1.86
SSF2YDR312W YMC2P38087 329 aa3.41□□□□□ -1.86
SSF2YDR312W YBR071WP38243 211 aa3.41□□□□□ -1.86
SSF2YDR312W PXA1P41909 870 aa3.41□□□□□ -1.86
SSF2YDR312W NMA2P53204 395 aa3.41□□□□□ -1.86
SSF2YDR312W YSH1Q06224 779 aaPredicted RBP3.41□□□□□ -1.86
SSF2YDR312W MRI1Q06489 411 aaKnown RBP3.41□□□□□ -1.86
SSF2YDR312W SIN3P22579 1536 aa3.41□□□□□ -1.86
SSF2YDR312W ATP12P22135 325 aa3.4□□□□□ -1.86
SSF2YDR312W NTH1P32356 751 aa3.4□□□□□ -1.86
SSF2YDR312W APL3P38065 1025 aa3.4□□□□□ -1.86
SSF2YDR312W MIT1P40002 666 aa3.4□□□□□ -1.86
SSF2YDR312W SNM1P40993 198 aa3.4□□□□□ -1.86
SSF2YDR312W NIT2P47016 307 aa3.4□□□□□ -1.86
SSF2YDR312W TAF4P50105 388 aa3.4□□□□□ -1.86
SSF2YDR312W HOF1Q05080 669 aa3.4□□□□□ -1.86
SSF2YDR312W TRE2Q08693 809 aa3.4□□□□□ -1.86
SSF2YDR312W YPR027CQ12079 277 aa3.4□□□□□ -1.86
SSF2YDR312W RMP1Q12530 201 aa3.4□□□□□ -1.86
SSF2YDR312W LAM4P38800 1345 aa3.4□□□□□ -1.87
SSF2YDR312W VPS15P22219 1454 aa3.4□□□□□ -1.87
SSF2YDR312W PHO5P00635 467 aa3.39□□□□□ -1.87
SSF2YDR312W SSB1P11484 613 aaKnown RBP3.39□□□□□ -1.87
SSF2YDR312W STE12P13574 688 aa3.39□□□□□ -1.87
SSF2YDR312W AEP2P22136 580 aa3.39□□□□□ -1.87
SSF2YDR312W RPA135P22138 1203 aaKnown RBP3.39□□□□□ -1.87
SSF2YDR312W PRP22P24384 1145 aaKnown RBP3.39□□□□□ -1.87
SSF2YDR312W PRE4P30657 266 aa3.39□□□□□ -1.87
SSF2YDR312W MF(ALPHA)2P32435 120 aa3.39□□□□□ -1.87
SSF2YDR312W ORC2P32833 620 aa3.39□□□□□ -1.87
SSF2YDR312W ENP1P38333 483 aaKnown RBP3.39□□□□□ -1.87
SSF2YDR312W SSB2P40150 613 aaKnown RBP3.39□□□□□ -1.87
SSF2YDR312W COG6P53959 839 aa3.39□□□□□ -1.87
SSF2YDR312W SKY1Q03656 742 aa3.39□□□□□ -1.87
SSF2YDR312W SLK19Q08581 821 aaKnown RBP3.39□□□□□ -1.87
SSF2YDR312W RKI1Q12189 258 aa3.39□□□□□ -1.87
SSF2YDR312W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
SSF2YDR312W NUP159P40477 1460 aa3.39□□□□□ -1.87
SSF2YDR312W DNF2Q12675 1612 aa3.39□□□□□ -1.87
SSF2YDR312W HOM2P13663 365 aaKnown RBP3.38□□□□□ -1.87
SSF2YDR312W HXT4P32467 576 aa3.38□□□□□ -1.87
SSF2YDR312W CDS1P38221 457 aa3.38□□□□□ -1.87
SSF2YDR312W PAF1P38351 445 aa3.38□□□□□ -1.87
SSF2YDR312W PMC1P38929 1173 aaPredicted RBP3.38□□□□□ -1.87
SSF2YDR312W PMT6P42934 759 aa3.38□□□□□ -1.87
SSF2YDR312W RNR4P49723 345 aaKnown RBP3.38□□□□□ -1.87
SSF2YDR312W DIP5P53388 608 aa3.38□□□□□ -1.87
SSF2YDR312W FOL1P53848 824 aa3.38□□□□□ -1.87
SSF2YDR312W NSE5Q03718 556 aa3.38□□□□□ -1.87
SSF2YDR312W PPN1Q04119 674 aa3.38□□□□□ -1.87
SSF2YDR312W IZH3Q07959 543 aa3.38□□□□□ -1.87
SSF2YDR312W OSW1Q08692 278 aa3.38□□□□□ -1.87
SSF2YDR312W YOR093CQ12275 1648 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 61.2 ms