RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeastyeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN6YDL097C SNU56Q03782 492 aaKnown RBP4.79□□□□□ -1.64
RPN6YDL097C TIF35Q04067 274 aaKnown RBP4.79□□□□□ -1.64
RPN6YDL097C YML096WQ04489 525 aa4.79□□□□□ -1.64
RPN6YDL097C FMP45Q07651 309 aa4.79□□□□□ -1.64
RPN6YDL097C MSL5Q12186 476 aaKnown RBP RIP-Chip data4.79□□□□□ -1.64not detected
RPN6YDL097C FUR4P05316 633 aaKnown RBP4.78□□□□□ -1.64
RPN6YDL097C TCP1P12612 559 aaKnown RBP4.78□□□□□ -1.64
RPN6YDL097C MET4P32389 672 aa4.78□□□□□ -1.64
RPN6YDL097C PIM1P36775 1133 aa4.78□□□□□ -1.64
RPN6YDL097C YFL034WP43564 1073 aa4.78□□□□□ -1.64
RPN6YDL097C FLC3P53121 802 aa4.78□□□□□ -1.64
RPN6YDL097C CAF130P53280 1122 aaPredicted RBP4.78□□□□□ -1.64
RPN6YDL097C CEG1Q01159 459 aaPredicted RBP4.78□□□□□ -1.64
RPN6YDL097C ISR1Q06098 443 aaKnown RBP4.78□□□□□ -1.64
RPN6YDL097C YOL024WQ08172 172 aa4.78□□□□□ -1.64
RPN6YDL097C CBC2Q08920 208 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
RPN6YDL097C FRE7Q12333 620 aa4.78□□□□□ -1.64
RPN6YDL097C TRS33Q99394 268 aa4.78□□□□□ -1.64
RPN6YDL097C DYN1P36022 4092 aa4.78□□□□□ -1.64
RPN6YDL097C MRPL40P36534 297 aa4.77□□□□□ -1.65
RPN6YDL097C ERC1P38767 581 aa4.77□□□□□ -1.65
RPN6YDL097C RPN3P40016 523 aaKnown RBP4.77□□□□□ -1.65
RPN6YDL097C ALR2P43553 858 aa4.77□□□□□ -1.65
RPN6YDL097C AIM23P47015 356 aa4.77□□□□□ -1.65
RPN6YDL097C BIR1P47134 954 aa4.77□□□□□ -1.65
RPN6YDL097C PYK2P52489 506 aaKnown RBP4.77□□□□□ -1.65
RPN6YDL097C CSM3Q04659 317 aa4.77□□□□□ -1.65
RPN6YDL097C RRP15Q06511 250 aaPredicted RBP4.77□□□□□ -1.65
RPN6YDL097C CDD1Q06549 142 aa4.77□□□□□ -1.65
RPN6YDL097C YOL073CQ08232 322 aa4.77□□□□□ -1.65
RPN6YDL097C GPM2Q12008 311 aa4.77□□□□□ -1.65
RPN6YDL097C YRA1Q12159 226 aaKnown RBP4.77□□□□□ -1.65
RPN6YDL097C HIS4P00815 799 aaKnown RBP4.76□□□□□ -1.65
RPN6YDL097C TPK1P06244 397 aa4.76□□□□□ -1.65
RPN6YDL097C DBP5P20449 482 aaKnown RBP4.76□□□□□ -1.65
RPN6YDL097C TKL2P33315 681 aa4.76□□□□□ -1.65
RPN6YDL097C TBS1P38114 1094 aa4.76□□□□□ -1.65
RPN6YDL097C AIM9P40053 627 aaKnown RBP4.76□□□□□ -1.65
RPN6YDL097C QDR1P40475 563 aa4.76□□□□□ -1.65
RPN6YDL097C ULP2P40537 1034 aaPredicted RBP4.76□□□□□ -1.65
RPN6YDL097C NCS2P53923 493 aaPredicted RBP4.76□□□□□ -1.65
RPN6YDL097C YPL014WQ02606 381 aa4.76□□□□□ -1.65
RPN6YDL097C SPO21Q12411 609 aa4.76□□□□□ -1.65
RPN6YDL097C ATE1P16639 503 aa4.75□□□□□ -1.65
RPN6YDL097C GSY1P23337 708 aa4.75□□□□□ -1.65
RPN6YDL097C CWP1P28319 239 aa4.75□□□□□ -1.65
RPN6YDL097C SHE3P38272 425 aaKnown RBP4.75□□□□□ -1.65
RPN6YDL097C YBR225WP38321 900 aa4.75□□□□□ -1.65
RPN6YDL097C YHR078WP38799 552 aa4.75□□□□□ -1.65
RPN6YDL097C DUN1P39009 513 aa4.75□□□□□ -1.65
RPN6YDL097C AVT2P39981 480 aa4.75□□□□□ -1.65
RPN6YDL097C SHQ1P40486 507 aaPredicted RBP4.75□□□□□ -1.65
RPN6YDL097C CIS3P47001 227 aa4.75□□□□□ -1.65
RPN6YDL097C NOP13P53883 403 aaKnown RBP RIP-Chip data4.75□□□□□ -1.65not detected
RPN6YDL097C HDA3Q06623 655 aa4.75□□□□□ -1.65
RPN6YDL097C WHI5Q12416 295 aa4.75□□□□□ -1.65
RPN6YDL097C SEC39Q12745 709 aa4.75□□□□□ -1.65
RPN6YDL097C RPP2BP02400 110 aaKnown RBP4.74□□□□□ -1.65
RPN6YDL097C YCK2P23292 546 aaKnown RBP4.74□□□□□ -1.65
RPN6YDL097C CIN8P27895 1000 aa4.74□□□□□ -1.65
RPN6YDL097C MCX1P38323 520 aaPredicted RBP4.74□□□□□ -1.65
RPN6YDL097C YHR054CP38780 354 aa4.74□□□□□ -1.65
RPN6YDL097C MGS1P40151 587 aa4.74□□□□□ -1.65
RPN6YDL097C SCD6P45978 349 aaKnown RBP RIP-Chip data4.74□□□□□ -1.65not detected
RPN6YDL097C DSE4P53753 1117 aa4.74□□□□□ -1.65
RPN6YDL097C ADY4Q05955 493 aa4.74□□□□□ -1.65
RPN6YDL097C NUT2Q06213 157 aa4.74□□□□□ -1.65
RPN6YDL097C THI73Q07904 523 aa4.74□□□□□ -1.65
RPN6YDL097C SAM4Q08985 325 aaKnown RBP4.74□□□□□ -1.65
RPN6YDL097C LCB4Q12246 624 aa4.74□□□□□ -1.65
RPN6YDL097C TY1A-DR3Q12441 440 aa4.74□□□□□ -1.65
RPN6YDL097C SKM1Q12469 655 aa4.74□□□□□ -1.65
RPN6YDL097C ABF1P14164 731 aa4.73□□□□□ -1.65
RPN6YDL097C VPS35P34110 944 aa4.73□□□□□ -1.65
RPN6YDL097C MTD1Q02046 320 aaKnown RBP4.73□□□□□ -1.65
RPN6YDL097C VHS1Q03785 461 aa4.73□□□□□ -1.65
RPN6YDL097C TSR1Q07381 788 aaKnown RBP4.73□□□□□ -1.65
RPN6YDL097C MCA1Q08601 432 aa4.73□□□□□ -1.65
RPN6YDL097C YOR387CQ08910 206 aa4.73□□□□□ -1.65
RPN6YDL097C TMS1Q12116 473 aa4.73□□□□□ -1.65
RPN6YDL097C LPX1Q12405 387 aaKnown RBP4.73□□□□□ -1.65
RPN6YDL097C NAG1Q8TGN9 163 aa4.73□□□□□ -1.65
RPN6YDL097C FRT1Q99332 602 aa4.73□□□□□ -1.65
RPN6YDL097C MDN1Q12019 4910 aaKnown RBP4.73□□□□□ -1.65
RPN6YDL097C CYT1P07143 309 aa4.72□□□□□ -1.65
RPN6YDL097C SSD1P24276 1250 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65not detected
RPN6YDL097C LDB16P25587 256 aa4.72□□□□□ -1.65
RPN6YDL097C PYC2P32327 1180 aaKnown RBP4.72□□□□□ -1.65
RPN6YDL097C PET10P36139 283 aa4.72□□□□□ -1.65
RPN6YDL097C AHP1P38013 176 aaKnown RBP4.72□□□□□ -1.65
RPN6YDL097C BRN1P38170 754 aa4.72□□□□□ -1.65
RPN6YDL097C MUM2P38236 366 aa4.72□□□□□ -1.65
RPN6YDL097C SSN3P39073 555 aa4.72□□□□□ -1.65
RPN6YDL097C YIL092WP40497 633 aa4.72□□□□□ -1.65
RPN6YDL097C ORC5P50874 479 aa4.72□□□□□ -1.65
RPN6YDL097C SHE10P53075 577 aa4.72□□□□□ -1.65
RPN6YDL097C VTC3Q02725 835 aa4.72□□□□□ -1.65
RPN6YDL097C ECM22Q05958 814 aaPredicted RBP4.72□□□□□ -1.65
RPN6YDL097C LSO1Q3E827 93 aa4.72□□□□□ -1.65
RPN6YDL097C GLT1Q12680 2145 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms