RNA–Protein interactions for RNA: YCL069W

VBA3, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA3, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA3YCL069W YNL034WP53963 612 aa8.73□□□□□ -1.01
VBA3YCL069W YNL018CP53976 612 aa8.73□□□□□ -1.01
VBA3YCL069W ADA2Q02336 434 aa8.73□□□□□ -1.01
VBA3YCL069W YDR278CQ05612 105 aa8.73□□□□□ -1.01
VBA3YCL069W DIS3Q08162 1001 aaKnown RBP8.73□□□□□ -1.01
VBA3YCL069W MDM38Q08179 573 aa8.73□□□□□ -1.01
VBA3YCL069W PGS1P25578 521 aa8.72□□□□□ -1.01
VBA3YCL069W SRB4P32569 687 aa8.72□□□□□ -1.01
VBA3YCL069W BLI1P35727 113 aa8.72□□□□□ -1.01
VBA3YCL069W STB5P38699 743 aa8.72□□□□□ -1.01
VBA3YCL069W KAP114P53067 1004 aa8.72□□□□□ -1.01
VBA3YCL069W BOP3P53958 396 aa8.72□□□□□ -1.01
VBA3YCL069W YLR257WQ06146 321 aaKnown RBP8.72□□□□□ -1.01
VBA3YCL069W VAC14Q06708 880 aa8.72□□□□□ -1.01
VBA3YCL069W MNL2Q12205 849 aa8.72□□□□□ -1.01
VBA3YCL069W YDR034W-BQ6Q5X2 51 aa8.72□□□□□ -1.01
VBA3YCL069W POL3P15436 1097 aa8.71□□□□□ -1.02
VBA3YCL069W EST1P17214 699 aaPredicted RBP8.71□□□□□ -1.02
VBA3YCL069W RRT2P38332 387 aa8.71□□□□□ -1.02
VBA3YCL069W HIS2P38635 335 aa8.71□□□□□ -1.02
VBA3YCL069W CDC1P40986 491 aa8.71□□□□□ -1.02
VBA3YCL069W TAF1P46677 1066 aa8.71□□□□□ -1.02
VBA3YCL069W BRO1P48582 844 aa8.71□□□□□ -1.02
VBA3YCL069W NGL3Q03210 505 aa8.71□□□□□ -1.02
VBA3YCL069W YMR114CQ04471 368 aaKnown RBP8.71□□□□□ -1.02
VBA3YCL069W SML1Q04964 104 aa8.71□□□□□ -1.02
VBA3YCL069W RCL1Q08096 367 aaPredicted RBP8.71□□□□□ -1.02
VBA3YCL069W DDC1Q08949 612 aa8.71□□□□□ -1.02
VBA3YCL069W SPE1P08432 466 aa8.7□□□□□ -1.02
VBA3YCL069W PDE1P22434 369 aa8.7□□□□□ -1.02
VBA3YCL069W RGD1P38339 666 aa8.7□□□□□ -1.02
VBA3YCL069W TMN3P40071 706 aa8.7□□□□□ -1.02
VBA3YCL069W ASG1P40467 964 aa8.7□□□□□ -1.02
VBA3YCL069W SNZ3P43545 298 aa8.7□□□□□ -1.02
VBA3YCL069W BTN2P53286 410 aa8.7□□□□□ -1.02
VBA3YCL069W SNZ2P53824 298 aa8.7□□□□□ -1.02
VBA3YCL069W TAF9Q05027 157 aa8.7□□□□□ -1.02
VBA3YCL069W ESC2Q06340 456 aa8.7□□□□□ -1.02
VBA3YCL069W MCM16Q12262 181 aa8.7□□□□□ -1.02
VBA3YCL069W GFA1P14742 717 aaKnown RBP8.69□□□□□ -1.02
VBA3YCL069W CKI1P20485 582 aa8.69□□□□□ -1.02
VBA3YCL069W SPT5P27692 1063 aaKnown RBP8.69□□□□□ -1.02
VBA3YCL069W DBF4P32325 704 aa8.69□□□□□ -1.02
VBA3YCL069W SRB2P34162 210 aa8.69□□□□□ -1.02
VBA3YCL069W YER189WP40104 122 aa8.69□□□□□ -1.02
VBA3YCL069W NIS1P53939 407 aa8.69□□□□□ -1.02
VBA3YCL069W ELP3Q02908 557 aaKnown RBP8.69□□□□□ -1.02
VBA3YCL069W HER2Q03557 464 aa8.69□□□□□ -1.02
VBA3YCL069W AIM39Q08223 395 aa8.69□□□□□ -1.02
VBA3YCL069W NBP2Q12163 236 aa8.69□□□□□ -1.02
VBA3YCL069W AEP2P22136 580 aa8.68□□□□□ -1.02
VBA3YCL069W PAP1P29468 568 aaKnown RBP8.68□□□□□ -1.02
VBA3YCL069W ABD1P32783 436 aaPredicted RBP8.68□□□□□ -1.02
VBA3YCL069W SEG2P34250 1132 aa8.68□□□□□ -1.02
VBA3YCL069W RAD55P38953 406 aa8.68□□□□□ -1.02
VBA3YCL069W AVT2P39981 480 aa8.68□□□□□ -1.02
VBA3YCL069W NDC80P40460 691 aa8.68□□□□□ -1.02
VBA3YCL069W GUF1P46943 645 aa8.68□□□□□ -1.02
VBA3YCL069W VTC4P47075 721 aa8.68□□□□□ -1.02
VBA3YCL069W VPS25P47142 202 aa8.68□□□□□ -1.02
VBA3YCL069W ATG16Q03818 150 aa8.68□□□□□ -1.02
VBA3YCL069W YLR462WO13556 202 aa8.67□□□□□ -1.02
VBA3YCL069W PUT4P15380 627 aa8.67□□□□□ -1.02
VBA3YCL069W TRX1P22217 103 aaKnown RBP8.67□□□□□ -1.02
VBA3YCL069W SEC1P30619 724 aaKnown RBP8.67□□□□□ -1.02
VBA3YCL069W MET4P32389 672 aa8.67□□□□□ -1.02
VBA3YCL069W YBR053CP38235 358 aa8.67□□□□□ -1.02
VBA3YCL069W YHL049CP38722 271 aa8.67□□□□□ -1.02
VBA3YCL069W RIM4P38741 713 aa8.67□□□□□ -1.02
VBA3YCL069W SMF1P38925 575 aa8.67□□□□□ -1.02
VBA3YCL069W FHL1P39521 936 aa8.67□□□□□ -1.02
VBA3YCL069W SPC72P39723 622 aa8.67□□□□□ -1.02
VBA3YCL069W PAC1P39946 494 aaKnown RBP8.67□□□□□ -1.02
VBA3YCL069W LCP5P40079 357 aaPredicted RBP8.67□□□□□ -1.02
VBA3YCL069W YFL064CP43540 174 aa8.67□□□□□ -1.02
VBA3YCL069W TUB4P53378 473 aa8.67□□□□□ -1.02
VBA3YCL069W NOG2P53742 486 aaKnown RBP8.67□□□□□ -1.02
VBA3YCL069W MTD1Q02046 320 aaKnown RBP8.67□□□□□ -1.02
VBA3YCL069W GCN5Q03330 439 aa8.67□□□□□ -1.02
VBA3YCL069W AGE1Q04412 482 aa8.67□□□□□ -1.02
VBA3YCL069W HRD3Q05787 833 aa8.67□□□□□ -1.02
VBA3YCL069W YBL111CQ3E7Y5 667 aa8.67□□□□□ -1.02
VBA3YCL069W ADE3P07245 946 aaKnown RBP8.66□□□□□ -1.02
VBA3YCL069W SYN8P31377 255 aa8.66□□□□□ -1.02
VBA3YCL069W HSL7P38274 827 aa8.66□□□□□ -1.02
VBA3YCL069W NMD3P38861 518 aaKnown RBP8.66□□□□□ -1.02
VBA3YCL069W PRK1P40494 810 aa8.66□□□□□ -1.02
VBA3YCL069W YIL054WP40524 105 aa8.66□□□□□ -1.02
VBA3YCL069W RPS0BP46654 252 aaKnown RBP8.66□□□□□ -1.02
VBA3YCL069W CEG1Q01159 459 aaPredicted RBP8.66□□□□□ -1.02
VBA3YCL069W YPL062WQ02781 134 aa8.66□□□□□ -1.02
VBA3YCL069W SXM1Q04175 944 aaKnown RBP8.66□□□□□ -1.02
VBA3YCL069W ERV41Q04651 352 aa8.66□□□□□ -1.02
VBA3YCL069W ECM22Q05958 814 aaPredicted RBP8.66□□□□□ -1.02
VBA3YCL069W PIG1Q06216 648 aa8.66□□□□□ -1.02
VBA3YCL069W PUF3Q07807 879 aaKnown RBP RIP-Chip data8.66□□□□□ -1.02not detected
VBA3YCL069W VPS5Q92331 675 aa8.66□□□□□ -1.02
VBA3YCL069W YBL055CP34220 418 aaPredicted RBP8.65□□□□□ -1.02
VBA3YCL069W TSA1P34760 196 aaKnown RBP8.65□□□□□ -1.02
VBA3YCL069W REI1P38344 393 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms