RNA–Protein interactions for RNA: YBR288C

APM3, Transcript of Mu3-like subunit of the clathrin associated protein complex (AP-3), yeast

Gene APM3, Length 1,452 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APM3	YBR288C	TRS23	Q03784	219 aa		4.78	□□□□□ -1.64
APM3	YBR288C	MTQ2	Q03920	221 aa	Predicted RBP	4.78	□□□□□ -1.64
APM3	YBR288C	PPN1	Q04119	674 aa		4.78	□□□□□ -1.64
APM3	YBR288C	UTP14	Q04500	899 aa	Known RBP	4.78	□□□□□ -1.64
APM3	YBR288C	PRE4	P30657	266 aa		4.77	□□□□□ -1.65
APM3	YBR288C	HXT6	P39003	570 aa	Known RBP	4.77	□□□□□ -1.65
APM3	YBR288C	HXT7	P39004	570 aa		4.77	□□□□□ -1.65
APM3	YBR288C	DAK1	P54838	584 aa	Known RBP	4.77	□□□□□ -1.65
APM3	YBR288C	SEG1	Q04279	960 aa		4.77	□□□□□ -1.65
APM3	YBR288C	HFD1	Q04458	532 aa		4.77	□□□□□ -1.65
APM3	YBR288C	GLN4	P13188	809 aa	Known RBP	4.76	□□□□□ -1.65
APM3	YBR288C	TAX4	P47030	604 aa		4.76	□□□□□ -1.65
APM3	YBR288C	TAF4	P50105	388 aa		4.76	□□□□□ -1.65
APM3	YBR288C	TIM50	Q02776	476 aa		4.76	□□□□□ -1.65
APM3	YBR288C	YHM2	Q04013	314 aa		4.76	□□□□□ -1.65
APM3	YBR288C	ARG7	Q04728	441 aa		4.76	□□□□□ -1.65
APM3	YBR288C	NUP1	P20676	1076 aa		4.75	□□□□□ -1.65
APM3	YBR288C	PPE1	P38796	400 aa		4.75	□□□□□ -1.65
APM3	YBR288C	CRG1	P38892	291 aa	RIP-Chip data	4.75	□□□□□ -1.65	not detected
APM3	YBR288C	IES1	P43579	692 aa		4.75	□□□□□ -1.65
APM3	YBR288C	YGL117W	P53133	265 aa		4.75	□□□□□ -1.65
APM3	YBR288C	FDC1	Q03034	503 aa		4.75	□□□□□ -1.65
APM3	YBR288C	TUP1	P16649	713 aa		4.75	□□□□□ -1.65
APM3	YBR288C	FTR1	P40088	404 aa		4.75	□□□□□ -1.65
APM3	YBR288C	THI6	P41835	540 aa		4.75	□□□□□ -1.65
APM3	YBR288C	GZF3	P42944	551 aa	Known RBP	4.75	□□□□□ -1.65
APM3	YBR288C	AAD3	P25612	363 aa		4.74	□□□□□ -1.65
APM3	YBR288C	OAF3	P36023	863 aa		4.74	□□□□□ -1.65
APM3	YBR288C	CDS1	P38221	457 aa		4.74	□□□□□ -1.65
APM3	YBR288C	FAT1	P38225	669 aa		4.74	□□□□□ -1.65
APM3	YBR288C	UME1	Q03010	460 aa		4.74	□□□□□ -1.65
APM3	YBR288C	YTM1	Q12024	460 aa	Predicted RBP	4.74	□□□□□ -1.65
APM3	YBR288C	HFI1	Q12060	488 aa		4.74	□□□□□ -1.65
APM3	YBR288C	ICT1	Q12385	394 aa		4.74	□□□□□ -1.65
APM3	YBR288C	RPS21A	P0C0V8	87 aa	Known RBP	4.73	□□□□□ -1.65
APM3	YBR288C	MRPL7	P36519	292 aa		4.73	□□□□□ -1.65
APM3	YBR288C	OAF1	P39720	1047 aa	Predicted RBP	4.73	□□□□□ -1.65
APM3	YBR288C	YIP4	P53093	235 aa		4.73	□□□□□ -1.65
APM3	YBR288C	YGR054W	P53235	642 aa	Known RBP	4.73	□□□□□ -1.65
APM3	YBR288C	CPR8	P53728	308 aa		4.73	□□□□□ -1.65
APM3	YBR288C	YNR029C	P53729	429 aa	Known RBP	4.73	□□□□□ -1.65
APM3	YBR288C	MFM1	Q02783	413 aa		4.73	□□□□□ -1.65
APM3	YBR288C	NSE5	Q03718	556 aa		4.73	□□□□□ -1.65
APM3	YBR288C	NUP145	P49687	1317 aa		4.72	□□□□□ -1.65
APM3	YBR288C	PGK1	P00560	416 aa	Known RBP	4.72	□□□□□ -1.65
APM3	YBR288C	RIM4	P38741	713 aa		4.72	□□□□□ -1.65
APM3	YBR288C	PRM2	P40534	656 aa		4.72	□□□□□ -1.65
APM3	YBR288C	VID28	P40547	921 aa		4.72	□□□□□ -1.65
APM3	YBR288C	MNN11	P46985	422 aa	Known RBP	4.72	□□□□□ -1.65
APM3	YBR288C	YJR142W	P47173	342 aa		4.72	□□□□□ -1.65
APM3	YBR288C	PMT3	P47190	753 aa		4.72	□□□□□ -1.65
APM3	YBR288C	GLO1	P50107	326 aa		4.72	□□□□□ -1.65
APM3	YBR288C	EFR3	Q03653	782 aa	Known RBP	4.72	□□□□□ -1.65
APM3	YBR288C	YAP7	Q08182	245 aa		4.72	□□□□□ -1.65
APM3	YBR288C	YHR033W	P38690	423 aa		4.71	□□□□□ -1.66
APM3	YBR288C	PIH1	P38768	344 aa		4.71	□□□□□ -1.66
APM3	YBR288C	XBP1	P40489	647 aa		4.71	□□□□□ -1.66
APM3	YBR288C	BNA3	P47039	444 aa	Known RBP	4.71	□□□□□ -1.66
APM3	YBR288C	GPG1	P53130	126 aa		4.71	□□□□□ -1.66
APM3	YBR288C	PTA1	Q01329	785 aa	Predicted RBP	4.71	□□□□□ -1.66
APM3	YBR288C	ZPS1	Q12512	249 aa		4.71	□□□□□ -1.66
APM3	YBR288C	AI5_ALPHA	Q9ZZX1	630 aa		4.71	□□□□□ -1.66
APM3	YBR288C	CDC26	P14724	124 aa		4.7	□□□□□ -1.66
APM3	YBR288C	APN1	P22936	367 aa		4.7	□□□□□ -1.66
APM3	YBR288C	PTP1	P25044	335 aa		4.7	□□□□□ -1.66
APM3	YBR288C	TMT1	P32643	299 aa		4.7	□□□□□ -1.66
APM3	YBR288C	HOT13	P36078	116 aa		4.7	□□□□□ -1.66
APM3	YBR288C	CEF1	Q03654	590 aa	Predicted RBP	4.7	□□□□□ -1.66
APM3	YBR288C	HLR1	Q04429	423 aa		4.7	□□□□□ -1.66
APM3	YBR288C	APM4	Q99186	491 aa		4.7	□□□□□ -1.66
APM3	YBR288C	LEU2	P04173	364 aa	Predicted RBP	4.69	□□□□□ -1.66
APM3	YBR288C	CNE1	P27825	502 aa		4.69	□□□□□ -1.66
APM3	YBR288C	DID4	P36108	232 aa		4.69	□□□□□ -1.66
APM3	YBR288C	PIP2	P52960	996 aa		4.69	□□□□□ -1.66
APM3	YBR288C	YGR161W-C	Q3E744	92 aa		4.69	□□□□□ -1.66
APM3	YBR288C	MF(ALPHA)2	P32435	120 aa		4.69	□□□□□ -1.66
APM3	YBR288C	MTC7	P32633	139 aa		4.69	□□□□□ -1.66
APM3	YBR288C	EHT1	P38295	451 aa		4.69	□□□□□ -1.66
APM3	YBR288C	GPP1	P41277	250 aa	Known RBP	4.69	□□□□□ -1.66
APM3	YBR288C	BUD17	P53727	317 aa		4.69	□□□□□ -1.66
APM3	YBR288C	YPL216W	Q08964	1102 aa		4.69	□□□□□ -1.66
APM3	YBR288C	MBR1	P23493	339 aa		4.68	□□□□□ -1.66
APM3	YBR288C	YEL025C	P39991	1188 aa		4.68	□□□□□ -1.66
APM3	YBR288C	LTP1	P40347	161 aa		4.68	□□□□□ -1.66
APM3	YBR288C	NET1	P47035	1189 aa		4.68	□□□□□ -1.66
APM3	YBR288C	YCG1	Q06680	1035 aa		4.68	□□□□□ -1.66
APM3	YBR288C	AIM41	Q12032	185 aa		4.68	□□□□□ -1.66
APM3	YBR288C	CPA2	P03965	1118 aa	Known RBP	4.67	□□□□□ -1.66
APM3	YBR288C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
APM3	YBR288C	PMA2	P19657	947 aa		4.67	□□□□□ -1.66
APM3	YBR288C	YGR237C	P50089	785 aa		4.67	□□□□□ -1.66
APM3	YBR288C	YNL018C	P53976	612 aa		4.67	□□□□□ -1.66
APM3	YBR288C	SEC5	P89102	971 aa		4.67	□□□□□ -1.66
APM3	YBR288C	YDL073W	Q07454	984 aa		4.67	□□□□□ -1.66
APM3	YBR288C	FAP7	Q12055	197 aa	Predicted RBP	4.67	□□□□□ -1.66
APM3	YBR288C	RPL7A	P05737	244 aa	Known RBP	4.66	□□□□□ -1.66
APM3	YBR288C	DGR2	P32330	852 aa		4.66	□□□□□ -1.66
APM3	YBR288C	DHR2	P36009	735 aa	Predicted RBP	4.66	□□□□□ -1.66
APM3	YBR288C	YDL183C	P48569	320 aa		4.66	□□□□□ -1.66
APM3	YBR288C	COQ6	P53318	479 aa		4.66	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 20 ms