RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C AEP2P22136 580 aa3.88□□□□□ -1.79
SHG1YBR258C ERG6P25087 383 aaKnown RBP3.88□□□□□ -1.79
SHG1YBR258C IMG2P25642 146 aaPredicted RBP3.88□□□□□ -1.79
SHG1YBR258C SEC65P29478 273 aa3.88□□□□□ -1.79
SHG1YBR258C PET127P32606 800 aa3.88□□□□□ -1.79
SHG1YBR258C TOM20P35180 183 aa3.88□□□□□ -1.79
SHG1YBR258C YKL222CP35995 705 aa3.88□□□□□ -1.79
SHG1YBR258C YKR075CP36155 307 aa3.88□□□□□ -1.79
SHG1YBR258C CCT3P39077 534 aaKnown RBP3.88□□□□□ -1.79
SHG1YBR258C GET2P40056 285 aa3.88□□□□□ -1.79
SHG1YBR258C AIM21P40563 679 aa3.88□□□□□ -1.79
SHG1YBR258C YJL163CP46996 555 aa3.88□□□□□ -1.79
SHG1YBR258C NOP9P47077 666 aaKnown RBP3.88□□□□□ -1.79
SHG1YBR258C PTA1Q01329 785 aaPredicted RBP3.88□□□□□ -1.79
SHG1YBR258C YHM2Q04013 314 aa3.88□□□□□ -1.79
SHG1YBR258C PUS9Q12069 462 aa3.88□□□□□ -1.79
SHG1YBR258C ROM2P51862 1356 aaKnown RBP3.88□□□□□ -1.79
SHG1YBR258C ALG7P07286 448 aa3.87□□□□□ -1.79
SHG1YBR258C PEX1P24004 1043 aa3.87□□□□□ -1.79
SHG1YBR258C TAF5P38129 798 aa3.87□□□□□ -1.79
SHG1YBR258C FAT1P38225 669 aa3.87□□□□□ -1.79
SHG1YBR258C BCD1P38772 366 aa3.87□□□□□ -1.79
SHG1YBR258C RSC8P43609 557 aaKnown RBP3.87□□□□□ -1.79
SHG1YBR258C YJR120WP47157 116 aa3.87□□□□□ -1.79
SHG1YBR258C MSE1P48525 536 aa3.87□□□□□ -1.79
SHG1YBR258C UBC11P52492 156 aa3.87□□□□□ -1.79
SHG1YBR258C NOP15P53927 220 aaPredicted RBP3.87□□□□□ -1.79
SHG1YBR258C CTK1Q03957 528 aaKnown RBP3.87□□□□□ -1.79
SHG1YBR258C IOC4Q04213 475 aa3.87□□□□□ -1.79
SHG1YBR258C THI22Q06490 572 aa3.87□□□□□ -1.79
SHG1YBR258C RMP1Q12530 201 aa3.87□□□□□ -1.79
SHG1YBR258C RPS17AP02407 136 aaKnown RBP3.86□□□□□ -1.79
SHG1YBR258C TUB2P02557 457 aaKnown RBP3.86□□□□□ -1.79
SHG1YBR258C RPS17BP14127 136 aaKnown RBP3.86□□□□□ -1.79
SHG1YBR258C CDC26P14724 124 aa3.86□□□□□ -1.79
SHG1YBR258C FRS1P15624 595 aaKnown RBP3.86□□□□□ -1.79
SHG1YBR258C ACO1P19414 778 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
SHG1YBR258C FMO1P38866 432 aa3.86□□□□□ -1.79
SHG1YBR258C NUP60P39705 539 aa3.86□□□□□ -1.79
SHG1YBR258C BIT61P47041 543 aa3.86□□□□□ -1.79
SHG1YBR258C BFA1P47113 574 aa3.86□□□□□ -1.79
SHG1YBR258C MTL1P53214 551 aa3.86□□□□□ -1.79
SHG1YBR258C SUN4P53616 420 aa3.86□□□□□ -1.79
SHG1YBR258C RCR2Q03446 210 aaKnown RBP3.86□□□□□ -1.79
SHG1YBR258C SKY1Q03656 742 aa3.86□□□□□ -1.79
SHG1YBR258C NSE5Q03718 556 aa3.86□□□□□ -1.79
SHG1YBR258C YPS7Q06325 596 aa3.86□□□□□ -1.79
SHG1YBR258C OMS1Q06668 471 aa3.86□□□□□ -1.79
SHG1YBR258C VPS36Q06696 566 aa3.86□□□□□ -1.79
SHG1YBR258C ISA1Q07821 250 aaPredicted RBP3.86□□□□□ -1.79
SHG1YBR258C YOL073CQ08232 322 aa3.86□□□□□ -1.79
SHG1YBR258C VHS3Q08438 674 aa3.86□□□□□ -1.79
SHG1YBR258C CUP1-1P0CX80 61 aa3.85□□□□□ -1.79
SHG1YBR258C CUP1-2P0CX81 61 aa3.85□□□□□ -1.79
SHG1YBR258C MF(ALPHA)2P32435 120 aa3.85□□□□□ -1.79
SHG1YBR258C DAL3P32459 195 aa3.85□□□□□ -1.79
SHG1YBR258C HIR1P32479 840 aa3.85□□□□□ -1.79
SHG1YBR258C SER1P33330 395 aaKnown RBP3.85□□□□□ -1.79
SHG1YBR258C FMP52P40008 231 aa3.85□□□□□ -1.79
SHG1YBR258C ENP2P48234 707 aaKnown RBP3.85□□□□□ -1.79
SHG1YBR258C FOL1P53848 824 aa3.85□□□□□ -1.79
SHG1YBR258C YMR210WQ03649 449 aa3.85□□□□□ -1.79
SHG1YBR258C STP4Q07351 490 aa3.85□□□□□ -1.79
SHG1YBR258C IRC13Q08630 104 aa3.85□□□□□ -1.79
SHG1YBR258C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
SHG1YBR258C MHP1P43638 1398 aa3.85□□□□□ -1.79
SHG1YBR258C YRF1-3P0CX14 1859 aa3.84□□□□□ -1.79
SHG1YBR258C YRF1-7P0CX15 1859 aa3.84□□□□□ -1.79
SHG1YBR258C YRF1-6P53819 1859 aa3.84□□□□□ -1.79
SHG1YBR258C ERG20P08524 352 aaKnown RBP3.84□□□□□ -1.79
SHG1YBR258C HEM12P32347 362 aaPredicted RBP3.84□□□□□ -1.79
SHG1YBR258C PLC1P32383 869 aa3.84□□□□□ -1.79
SHG1YBR258C BIT2P38346 545 aa3.84□□□□□ -1.79
SHG1YBR258C EMP65P40085 556 aa3.84□□□□□ -1.79
SHG1YBR258C YNL195CP40168 261 aa3.84□□□□□ -1.79
SHG1YBR258C VID28P40547 921 aa3.84□□□□□ -1.79
SHG1YBR258C RNR4P49723 345 aaKnown RBP3.84□□□□□ -1.79
SHG1YBR258C PEX8P53248 589 aa3.84□□□□□ -1.79
SHG1YBR258C FHN1P53279 174 aa3.84□□□□□ -1.79
SHG1YBR258C YAP1802P53309 568 aa3.84□□□□□ -1.79
SHG1YBR258C PPN1Q04119 674 aa3.84□□□□□ -1.79
SHG1YBR258C SGO1Q08490 590 aa3.84□□□□□ -1.79
SHG1YBR258C YPR027CQ12079 277 aa3.84□□□□□ -1.79
SHG1YBR258C CLF1Q12309 687 aaPredicted RBP3.84□□□□□ -1.79
SHG1YBR258C POM34Q12445 299 aa3.84□□□□□ -1.79
SHG1YBR258C ECM3Q99252 613 aa3.84□□□□□ -1.79
SHG1YBR258C GLN4P13188 809 aaKnown RBP3.83□□□□□ -1.8
SHG1YBR258C YEF3P16521 1044 aaKnown RBP3.83□□□□□ -1.8
SHG1YBR258C KIN82P25341 720 aa3.83□□□□□ -1.8
SHG1YBR258C SUL1P38359 859 aa3.83□□□□□ -1.8
SHG1YBR258C HRB1P38922 454 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
SHG1YBR258C BUD8P41698 603 aa3.83□□□□□ -1.8
SHG1YBR258C TEL2P53038 688 aa3.83□□□□□ -1.8
SHG1YBR258C PEX14P53112 341 aa3.83□□□□□ -1.8
SHG1YBR258C SLI1P53304 468 aa3.83□□□□□ -1.8
SHG1YBR258C SPO1P53541 631 aa3.83□□□□□ -1.8
SHG1YBR258C RGC1Q06108 1083 aaKnown RBP3.83□□□□□ -1.8
SHG1YBR258C YKL033W-AQ86ZR7 236 aa3.83□□□□□ -1.8
SHG1YBR258C SPT7P35177 1332 aa3.83□□□□□ -1.8
SHG1YBR258C TOP1P04786 769 aa3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms