RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C NIS1P53939 407 aa4.24□□□□□ -1.73
PTA1YAL043C GPD1Q00055 391 aaKnown RBP4.24□□□□□ -1.73
PTA1YAL043C SLU7Q02775 382 aaKnown RBP4.24□□□□□ -1.73
PTA1YAL043C IWR1Q07532 353 aaPredicted RBP4.24□□□□□ -1.73
PTA1YAL043C CDC53Q12018 815 aaKnown RBP4.24□□□□□ -1.73
PTA1YAL043C TRM11Q12463 433 aa4.24□□□□□ -1.73
PTA1YAL043C TEF1P02994 458 aaKnown RBP4.24□□□□□ -1.73
PTA1YAL043C DED1P06634 604 aaKnown RBP4.24□□□□□ -1.73
PTA1YAL043C CDC10P25342 322 aaKnown RBP4.24□□□□□ -1.73
PTA1YAL043C GLC3P32775 704 aa4.24□□□□□ -1.73
PTA1YAL043C RAD5P32849 1169 aaPredicted RBP4.24□□□□□ -1.73
PTA1YAL043C CBF5P33322 483 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73not detected
PTA1YAL043C TRM5P38793 499 aa4.24□□□□□ -1.73
PTA1YAL043C NMD3P38861 518 aaKnown RBP4.24□□□□□ -1.73
PTA1YAL043C FLC2P39719 783 aa4.24□□□□□ -1.73
PTA1YAL043C EAF5P39995 279 aa4.24□□□□□ -1.73
PTA1YAL043C RPS7BP48164 190 aaKnown RBP4.24□□□□□ -1.73
PTA1YAL043C PCL10P53124 433 aa4.24□□□□□ -1.73
PTA1YAL043C USE1P53146 245 aa4.24□□□□□ -1.73
PTA1YAL043C SFB2P53953 876 aa4.24□□□□□ -1.73
PTA1YAL043C UBP2Q01476 1272 aa4.24□□□□□ -1.73
PTA1YAL043C EEB1Q02891 456 aa4.24□□□□□ -1.73
PTA1YAL043C VPS16Q03308 798 aa4.24□□□□□ -1.73
PTA1YAL043C SLD5Q03406 294 aa4.24□□□□□ -1.73
PTA1YAL043C YMR027WQ04371 470 aa4.24□□□□□ -1.73
PTA1YAL043C SPC24Q04477 213 aa4.24□□□□□ -1.73
PTA1YAL043C YET3Q07451 203 aa4.24□□□□□ -1.73
PTA1YAL043C YLL058WQ12198 575 aa4.24□□□□□ -1.73
PTA1YAL043C SEC39Q12745 709 aa4.24□□□□□ -1.73
PTA1YAL043C ILV2P07342 687 aaKnown RBP4.23□□□□□ -1.73
PTA1YAL043C HEM15P16622 393 aa4.23□□□□□ -1.73
PTA1YAL043C CLB4P24871 460 aa4.23□□□□□ -1.73
PTA1YAL043C RPC82P32349 654 aa4.23□□□□□ -1.73
PTA1YAL043C DAL1P32375 460 aa4.23□□□□□ -1.73
PTA1YAL043C UTR4P32626 227 aa4.23□□□□□ -1.73
PTA1YAL043C BCS1P32839 456 aa4.23□□□□□ -1.73
PTA1YAL043C YBR032WP38223 100 aa4.23□□□□□ -1.73
PTA1YAL043C YHL008CP38750 627 aa4.23□□□□□ -1.73
PTA1YAL043C AVT2P39981 480 aa4.23□□□□□ -1.73
PTA1YAL043C YFL012WP43580 148 aa4.23□□□□□ -1.73
PTA1YAL043C RTT102P53330 157 aa4.23□□□□□ -1.73
PTA1YAL043C SHR3Q02774 210 aa4.23□□□□□ -1.73
PTA1YAL043C MTG1Q03151 367 aaPredicted RBP4.23□□□□□ -1.73
PTA1YAL043C YDR476CQ03362 224 aa4.23□□□□□ -1.73
PTA1YAL043C YMR160WQ03823 816 aa4.23□□□□□ -1.73
PTA1YAL043C PPM1Q04081 328 aa4.23□□□□□ -1.73
PTA1YAL043C YET2Q04210 160 aa4.23□□□□□ -1.73
PTA1YAL043C YKU80Q04437 629 aa4.23□□□□□ -1.73
PTA1YAL043C MAG2Q06436 670 aaKnown RBP4.23□□□□□ -1.73
PTA1YAL043C RRP15Q06511 250 aaPredicted RBP4.23□□□□□ -1.73
PTA1YAL043C YPR172WQ06608 200 aa4.23□□□□□ -1.73
PTA1YAL043C VHS3Q08438 674 aa4.23□□□□□ -1.73
PTA1YAL043C REC8Q12188 680 aa4.23□□□□□ -1.73
PTA1YAL043C CLN1P20437 546 aa4.22□□□□□ -1.73
PTA1YAL043C TRX1P22217 103 aaKnown RBP4.22□□□□□ -1.73
PTA1YAL043C DGR2P32330 852 aa4.22□□□□□ -1.73
PTA1YAL043C PUP2P32379 260 aa4.22□□□□□ -1.73
PTA1YAL043C DPH5P32469 300 aaPredicted RBP4.22□□□□□ -1.73
PTA1YAL043C APN2P38207 520 aa4.22□□□□□ -1.73
PTA1YAL043C SHU2P38957 223 aa4.22□□□□□ -1.73
PTA1YAL043C PXA1P41909 870 aa4.22□□□□□ -1.73
PTA1YAL043C MAF1P41910 395 aa4.22□□□□□ -1.73
PTA1YAL043C STE20Q03497 939 aaKnown RBP4.22□□□□□ -1.73
PTA1YAL043C ACL4Q03771 387 aa4.22□□□□□ -1.73
PTA1YAL043C ATG16Q03818 150 aa4.22□□□□□ -1.73
PTA1YAL043C CRF1Q04930 467 aa4.22□□□□□ -1.73
PTA1YAL043C IVY1Q04934 453 aa4.22□□□□□ -1.73
PTA1YAL043C PHM6Q05637 104 aa4.22□□□□□ -1.73
PTA1YAL043C ADE13Q05911 482 aaKnown RBP4.22□□□□□ -1.73
PTA1YAL043C GGA1Q06336 557 aa4.22□□□□□ -1.73
PTA1YAL043C APC9Q12107 265 aa4.22□□□□□ -1.73
PTA1YAL043C RUP1Q12242 671 aa4.22□□□□□ -1.73
PTA1YAL043C ECM3Q99252 613 aa4.22□□□□□ -1.73
PTA1YAL043C HKR1P41809 1802 aa4.22□□□□□ -1.73
PTA1YAL043C GSC2P40989 1895 aa4.22□□□□□ -1.73
PTA1YAL043C CTT1P06115 562 aa4.22□□□□□ -1.73
PTA1YAL043C ARD1P07347 238 aaPredicted RBP4.22□□□□□ -1.73
PTA1YAL043C MCM5P29496 775 aaKnown RBP4.22□□□□□ -1.73
PTA1YAL043C IRE1P32361 1115 aa4.22□□□□□ -1.73
PTA1YAL043C RFC3P38629 340 aa4.22□□□□□ -1.73
PTA1YAL043C DYS1P38791 387 aa4.22□□□□□ -1.73
PTA1YAL043C AXL1P40851 1208 aa4.22□□□□□ -1.73
PTA1YAL043C ASN1P49089 572 aaKnown RBP4.22□□□□□ -1.73
PTA1YAL043C FPK1P53739 893 aa4.22□□□□□ -1.73
PTA1YAL043C YDR018CQ12185 396 aa4.22□□□□□ -1.73
PTA1YAL043C NFI1Q12216 726 aa4.22□□□□□ -1.73
PTA1YAL043C YPT6Q99260 215 aa4.22□□□□□ -1.73
PTA1YAL043C TY4B-PA0A0B7P3V8 1104 aa4.21□□□□□ -1.73
PTA1YAL043C BI2P03873 423 aa4.21□□□□□ -1.73
PTA1YAL043C BI4P03879 638 aa4.21□□□□□ -1.73
PTA1YAL043C SLY1P22213 666 aa4.21□□□□□ -1.73
PTA1YAL043C SPS22P25380 463 aa4.21□□□□□ -1.73
PTA1YAL043C YDJ1P25491 409 aaKnown RBP4.21□□□□□ -1.73
PTA1YAL043C PRR1P28708 518 aa4.21□□□□□ -1.73
PTA1YAL043C MEI4P29467 408 aa4.21□□□□□ -1.73
PTA1YAL043C TGL1P34163 548 aa4.21□□□□□ -1.73
PTA1YAL043C TDA11P38854 504 aa4.21□□□□□ -1.73
PTA1YAL043C VMA13P41807 478 aaKnown RBP4.21□□□□□ -1.73
PTA1YAL043C ZAP1P47043 880 aa4.21□□□□□ -1.73
PTA1YAL043C STB4P50104 949 aa4.21□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms