RNA–Protein interactions for RNA: YPR129W

SCD6, Transcript of Repressor of translation initiation, yeast

Gene SCD6, Length 1,050 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCD6	YPR129W	SKI3	P17883	1432 aa	Known RBP	4.19	□□□□□ -1.74
SCD6	YPR129W	GAL11	P19659	1081 aa		4.18	□□□□□ -1.74
SCD6	YPR129W	PEX1	P24004	1043 aa		4.18	□□□□□ -1.74
SCD6	YPR129W	BYE1	P36106	594 aa		4.18	□□□□□ -1.74
SCD6	YPR129W	BET3	P36149	193 aa		4.18	□□□□□ -1.74
SCD6	YPR129W	PAF1	P38351	445 aa		4.18	□□□□□ -1.74
SCD6	YPR129W	MIP6	P38760	659 aa	Known RBP	4.18	□□□□□ -1.74
SCD6	YPR129W	RSC8	P43609	557 aa	Known RBP	4.18	□□□□□ -1.74
SCD6	YPR129W	YGR151C	P53287	111 aa		4.18	□□□□□ -1.74
SCD6	YPR129W	SPC98	P53540	846 aa		4.18	□□□□□ -1.74
SCD6	YPR129W	REC102	Q02721	264 aa		4.18	□□□□□ -1.74
SCD6	YPR129W	GGA1	Q06336	557 aa		4.18	□□□□□ -1.74
SCD6	YPR129W	GLE1	Q12315	538 aa		4.18	□□□□□ -1.74
SCD6	YPR129W	VPS5	Q92331	675 aa		4.18	□□□□□ -1.74
SCD6	YPR129W	SUP35	P05453	685 aa	Known RBP	4.17	□□□□□ -1.74
SCD6	YPR129W	RNR1	P21524	888 aa	Known RBP	4.17	□□□□□ -1.74
SCD6	YPR129W	IME2	P32581	645 aa		4.17	□□□□□ -1.74
SCD6	YPR129W	RGT1	P32862	1170 aa		4.17	□□□□□ -1.74
SCD6	YPR129W	MIT1	P40002	666 aa		4.17	□□□□□ -1.74
SCD6	YPR129W	BNA2	P47125	453 aa		4.17	□□□□□ -1.74
SCD6	YPR129W	COG8	Q04632	607 aa		4.17	□□□□□ -1.74
SCD6	YPR129W	BMS1	Q08965	1183 aa	Known RBP	4.17	□□□□□ -1.74
SCD6	YPR129W	ABF1	P14164	731 aa		4.16	□□□□□ -1.74
SCD6	YPR129W	RPL5	P26321	297 aa	Known RBP	4.16	□□□□□ -1.74
SCD6	YPR129W	YMC1	P32331	307 aa		4.16	□□□□□ -1.74
SCD6	YPR129W	PMC1	P38929	1173 aa	Predicted RBP	4.16	□□□□□ -1.74
SCD6	YPR129W	TAX4	P47030	604 aa		4.16	□□□□□ -1.74
SCD6	YPR129W	HOS2	P53096	452 aa	Predicted RBP	4.16	□□□□□ -1.74
SCD6	YPR129W	HFD1	Q04458	532 aa		4.16	□□□□□ -1.74
SCD6	YPR129W	HSP42	Q12329	375 aa		4.16	□□□□□ -1.74
SCD6	YPR129W	PHO5	P00635	467 aa		4.15	□□□□□ -1.75
SCD6	YPR129W	MBR1	P23493	339 aa		4.15	□□□□□ -1.75
SCD6	YPR129W	BLI1	P35727	113 aa		4.15	□□□□□ -1.75
SCD6	YPR129W	KSP1	P38691	1029 aa	Known RBP	4.15	□□□□□ -1.75
SCD6	YPR129W	VPS27	P40343	622 aa	Known RBP	4.15	□□□□□ -1.75
SCD6	YPR129W	CCT5	P40413	562 aa	Known RBP	4.15	□□□□□ -1.75
SCD6	YPR129W	DSN1	P40568	576 aa		4.15	□□□□□ -1.75
SCD6	YPR129W	IES1	P43579	692 aa		4.15	□□□□□ -1.75
SCD6	YPR129W	TIM54	P47045	478 aa		4.15	□□□□□ -1.75
SCD6	YPR129W	HUL5	P53119	910 aa		4.15	□□□□□ -1.75
SCD6	YPR129W	YNL247W	P53852	767 aa	Known RBP	4.15	□□□□□ -1.75
SCD6	YPR129W	BNI5	P53890	448 aa	Known RBP	4.15	□□□□□ -1.75
SCD6	YPR129W	YOR389W	Q08912	624 aa		4.15	□□□□□ -1.75
SCD6	YPR129W	ULA1	Q12059	462 aa		4.15	□□□□□ -1.75
SCD6	YPR129W	SGS1	P35187	1447 aa		4.14	□□□□□ -1.75
SCD6	YPR129W	NOC2	P39744	710 aa	Known RBP	4.14	□□□□□ -1.75
SCD6	YPR129W	RAD26	P40352	1085 aa		4.14	□□□□□ -1.75
SCD6	YPR129W	ULP2	P40537	1034 aa	Predicted RBP	4.14	□□□□□ -1.75
SCD6	YPR129W	YFL052W	P43551	465 aa		4.14	□□□□□ -1.75
SCD6	YPR129W	ASN1	P49089	572 aa	Known RBP	4.14	□□□□□ -1.75
SCD6	YPR129W	ESF2	P53743	316 aa	Known RBP	4.14	□□□□□ -1.75
SCD6	YPR129W	YPL068C	Q02749	293 aa		4.14	□□□□□ -1.75
SCD6	YPR129W	TMA64	Q04600	565 aa	Known RBP	4.14	□□□□□ -1.75
SCD6	YPR129W	ERV41	Q04651	352 aa		4.14	□□□□□ -1.75
SCD6	YPR129W	YDL086W	Q07505	273 aa		4.14	□□□□□ -1.75
SCD6	YPR129W	NFI1	Q12216	726 aa		4.14	□□□□□ -1.75
SCD6	YPR129W	LSP1	Q12230	341 aa	Known RBP	4.14	□□□□□ -1.75
SCD6	YPR129W	TCB3	Q03640	1545 aa	Known RBP	4.14	□□□□□ -1.75
SCD6	YPR129W	SRP54	P20424	541 aa	Known RBP	4.13	□□□□□ -1.75
SCD6	YPR129W	PRP28	P23394	588 aa		4.13	□□□□□ -1.75
SCD6	YPR129W	MPE1	P35728	441 aa	Known RBP	4.13	□□□□□ -1.75
SCD6	YPR129W	BIT2	P38346	545 aa		4.13	□□□□□ -1.75
SCD6	YPR129W	YHR020W	P38708	688 aa	Known RBP	4.13	□□□□□ -1.75
SCD6	YPR129W	GID8	P40208	455 aa		4.13	□□□□□ -1.75
SCD6	YPR129W	FAF1	P40546	346 aa	Predicted RBP	4.13	□□□□□ -1.75
SCD6	YPR129W	NOP9	P47077	666 aa	Known RBP	4.13	□□□□□ -1.75
SCD6	YPR129W	STP1	Q00947	519 aa		4.13	□□□□□ -1.75
SCD6	YPR129W	RRB1	Q04225	511 aa	Known RBP	4.13	□□□□□ -1.75
SCD6	YPR129W	THI22	Q06490	572 aa		4.13	□□□□□ -1.75
SCD6	YPR129W	YPR172W	Q06608	200 aa		4.13	□□□□□ -1.75
SCD6	YPR129W	CLN1	P20437	546 aa		4.12	□□□□□ -1.75
SCD6	YPR129W	OPI1	P21957	404 aa		4.12	□□□□□ -1.75
SCD6	YPR129W	PWP2	P25635	923 aa	Known RBP	4.12	□□□□□ -1.75
SCD6	YPR129W	EFB1	P32471	206 aa	Known RBP	4.12	□□□□□ -1.75
SCD6	YPR129W	BCS1	P32839	456 aa		4.12	□□□□□ -1.75
SCD6	YPR129W	PEX5	P35056	612 aa		4.12	□□□□□ -1.75
SCD6	YPR129W	RPC37	P36121	282 aa		4.12	□□□□□ -1.75
SCD6	YPR129W	MUM2	P38236	366 aa		4.12	□□□□□ -1.75
SCD6	YPR129W	ERP2	P39704	215 aa		4.12	□□□□□ -1.75
SCD6	YPR129W	PIG2	P40187	538 aa		4.12	□□□□□ -1.75
SCD6	YPR129W	MEP2	P41948	499 aa		4.12	□□□□□ -1.75
SCD6	YPR129W	RTA1	P53047	317 aa		4.12	□□□□□ -1.75
SCD6	YPR129W	HEL2	Q05580	639 aa	Known RBP	4.12	□□□□□ -1.75
SCD6	YPR129W	ARR1	Q06596	294 aa		4.12	□□□□□ -1.75
SCD6	YPR129W	DIA2	Q08496	732 aa	Predicted RBP	4.12	□□□□□ -1.75
SCD6	YPR129W	GEP3	Q08622	556 aa		4.12	□□□□□ -1.75
SCD6	YPR129W	APC5	Q08683	685 aa		4.12	□□□□□ -1.75
SCD6	YPR129W	FLC1	Q08967	793 aa		4.12	□□□□□ -1.75
SCD6	YPR129W	SAC3	P46674	1301 aa		4.12	□□□□□ -1.75
SCD6	YPR129W	THR4	P16120	514 aa	Known RBP	4.11	□□□□□ -1.75
SCD6	YPR129W	KAR3	P17119	729 aa		4.11	□□□□□ -1.75
SCD6	YPR129W	MSM1	P22438	575 aa		4.11	□□□□□ -1.75
SCD6	YPR129W	SWI3	P32591	825 aa		4.11	□□□□□ -1.75
SCD6	YPR129W	TOM20	P35180	183 aa		4.11	□□□□□ -1.75
SCD6	YPR129W	HOT13	P36078	116 aa		4.11	□□□□□ -1.75
SCD6	YPR129W	PAP2	P53632	584 aa	Known RBP	4.11	□□□□□ -1.75
SCD6	YPR129W	JJJ1	P53863	590 aa		4.11	□□□□□ -1.75
SCD6	YPR129W	VTC3	Q02725	835 aa		4.11	□□□□□ -1.75
SCD6	YPR129W	YDL121C	Q07541	149 aa		4.11	□□□□□ -1.75
SCD6	YPR129W	SGT2	Q12118	346 aa	Known RBP	4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 74.5 ms