RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeastyeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDH1YPR002W TY4A-HQ6Q5P6 413 aa5.78□□□□□ -1.48
PDH1YPR002W RIF1P29539 1916 aa5.77□□□□□ -1.49
PDH1YPR002W SNF1P06782 633 aaKnown RBP5.77□□□□□ -1.49
PDH1YPR002W GPI10P30777 616 aa5.77□□□□□ -1.49
PDH1YPR002W SEC21P32074 935 aaKnown RBP5.77□□□□□ -1.49
PDH1YPR002W MET4P32389 672 aa5.77□□□□□ -1.49
PDH1YPR002W YME2P32843 850 aa5.77□□□□□ -1.49
PDH1YPR002W TFC4P33339 1025 aa5.77□□□□□ -1.49
PDH1YPR002W STE13P33894 931 aa5.77□□□□□ -1.49
PDH1YPR002W IRS4P36115 615 aaKnown RBP5.77□□□□□ -1.49
PDH1YPR002W TIF5P38431 405 aaKnown RBP5.77□□□□□ -1.49
PDH1YPR002W NDT80P38830 627 aa5.77□□□□□ -1.49
PDH1YPR002W ACO2P39533 789 aa5.77□□□□□ -1.49
PDH1YPR002W PSY2P40164 858 aa5.77□□□□□ -1.49
PDH1YPR002W YIR007WP40566 764 aa5.77□□□□□ -1.49
PDH1YPR002W GSM1P42950 618 aa5.77□□□□□ -1.49
PDH1YPR002W COS5P47187 383 aa5.77□□□□□ -1.49
PDH1YPR002W PCL10P53124 433 aa5.77□□□□□ -1.49
PDH1YPR002W CDC55Q00362 526 aa5.77□□□□□ -1.49
PDH1YPR002W OYE2Q03558 400 aaKnown RBP5.77□□□□□ -1.49
PDH1YPR002W SHE9Q04172 456 aa5.77□□□□□ -1.49
PDH1YPR002W CUR1Q06469 252 aa5.77□□□□□ -1.49
PDH1YPR002W ACK1Q07622 623 aaPredicted RBP5.77□□□□□ -1.49
PDH1YPR002W GPI13Q07830 1017 aa5.77□□□□□ -1.49
PDH1YPR002W RLP24Q07915 199 aaKnown RBP5.77□□□□□ -1.49
PDH1YPR002W OXR1Q08952 273 aa5.77□□□□□ -1.49
PDH1YPR002W YML002WP0CF17 737 aa5.76□□□□□ -1.49
PDH1YPR002W CBF1P17106 351 aa5.76□□□□□ -1.49
PDH1YPR002W SFL1P20134 766 aa5.76□□□□□ -1.49
PDH1YPR002W KIP1P28742 1111 aa5.76□□□□□ -1.49
PDH1YPR002W TRM2P33753 639 aa5.76□□□□□ -1.49
PDH1YPR002W SET3P36124 751 aa5.76□□□□□ -1.49
PDH1YPR002W PBP2P38151 413 aaKnown RBP RIP-Chip data5.76□□□□□ -1.49not detected
PDH1YPR002W EXO5P38289 585 aa5.76□□□□□ -1.49
PDH1YPR002W MSG5P38590 489 aa5.76□□□□□ -1.49
PDH1YPR002W APM2P38700 605 aa5.76□□□□□ -1.49
PDH1YPR002W TIF4631P39935 952 aaKnown RBP5.76□□□□□ -1.49
PDH1YPR002W ULP2P40537 1034 aaPredicted RBP5.76□□□□□ -1.49
PDH1YPR002W SEC26P41810 973 aaKnown RBP5.76□□□□□ -1.49
PDH1YPR002W ATG36P46983 293 aa5.76□□□□□ -1.49
PDH1YPR002W LSB1P53281 241 aa5.76□□□□□ -1.49
PDH1YPR002W JJJ1P53863 590 aa5.76□□□□□ -1.49
PDH1YPR002W ARK1P53974 638 aa5.76□□□□□ -1.49
PDH1YPR002W WHI4Q07655 649 aaKnown RBP5.76□□□□□ -1.49
PDH1YPR002W GPN2Q08726 347 aaPredicted RBP5.76□□□□□ -1.49
PDH1YPR002W TIF6Q12522 245 aaKnown RBP5.76□□□□□ -1.49
PDH1YPR002W GCR1P07261 785 aa5.76□□□□□ -1.49
PDH1YPR002W BUD14P27637 709 aa5.76□□□□□ -1.49
PDH1YPR002W MLS1P30952 554 aa5.76□□□□□ -1.49
PDH1YPR002W CDC11P32458 415 aa5.76□□□□□ -1.49
PDH1YPR002W UGA4P32837 571 aa5.76□□□□□ -1.49
PDH1YPR002W FZO1P38297 855 aa5.76□□□□□ -1.49
PDH1YPR002W HSM3P38348 480 aa5.76□□□□□ -1.49
PDH1YPR002W SPC72P39723 622 aa5.76□□□□□ -1.49
PDH1YPR002W ASG1P40467 964 aa5.76□□□□□ -1.49
PDH1YPR002W YIL001WP40560 513 aa5.76□□□□□ -1.49
PDH1YPR002W DIP5P53388 608 aa5.76□□□□□ -1.49
PDH1YPR002W RSC4Q02206 625 aa5.76□□□□□ -1.49
PDH1YPR002W TY1A-MR1Q04215 440 aa5.76□□□□□ -1.49
PDH1YPR002W PHO8P11491 566 aa5.75□□□□□ -1.49
PDH1YPR002W GCD2P12754 651 aaPredicted RBP5.75□□□□□ -1.49
PDH1YPR002W DIT1P21623 536 aa5.75□□□□□ -1.49
PDH1YPR002W NAB2P32505 525 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
PDH1YPR002W ZUO1P32527 433 aaKnown RBP5.75□□□□□ -1.49
PDH1YPR002W NCL1P38205 684 aaKnown RBP5.75□□□□□ -1.49
PDH1YPR002W VHC1P38329 1120 aa5.75□□□□□ -1.49
PDH1YPR002W SIP5P40210 489 aaKnown RBP5.75□□□□□ -1.49
PDH1YPR002W GPD2P41911 440 aaKnown RBP5.75□□□□□ -1.49
PDH1YPR002W VPS4P52917 437 aa5.75□□□□□ -1.49
PDH1YPR002W SNU71P53207 620 aaKnown RBP5.75□□□□□ -1.49
PDH1YPR002W ATG16Q03818 150 aa5.75□□□□□ -1.49
PDH1YPR002W YDR222WQ04925 415 aa5.75□□□□□ -1.49
PDH1YPR002W YDL124WQ07551 312 aaKnown RBP5.75□□□□□ -1.49
PDH1YPR002W ARP6Q12509 438 aa5.75□□□□□ -1.49
PDH1YPR002W SRD1P09007 221 aa5.74□□□□□ -1.49
PDH1YPR002W YMR085WP0CF18 432 aa5.74□□□□□ -1.49
PDH1YPR002W VMA4P22203 233 aaKnown RBP5.74□□□□□ -1.49
PDH1YPR002W CLB4P24871 460 aa5.74□□□□□ -1.49
PDH1YPR002W YKU70P32807 602 aa5.74□□□□□ -1.49
PDH1YPR002W YBL055CP34220 418 aaPredicted RBP5.74□□□□□ -1.49
PDH1YPR002W RPC37P36121 282 aa5.74□□□□□ -1.49
PDH1YPR002W MGE1P38523 228 aa5.74□□□□□ -1.49
PDH1YPR002W AIM46P38885 310 aa5.74□□□□□ -1.49
PDH1YPR002W SAM37P50110 327 aa5.74□□□□□ -1.49
PDH1YPR002W FMS1P50264 508 aa5.74□□□□□ -1.49
PDH1YPR002W ZIP2P53061 704 aa5.74□□□□□ -1.49
PDH1YPR002W NNF2P53253 936 aa5.74□□□□□ -1.49
PDH1YPR002W CUZ1P53899 274 aa5.74□□□□□ -1.49
PDH1YPR002W TIM8P57744 87 aa5.74□□□□□ -1.49
PDH1YPR002W YMR265CQ03508 461 aaKnown RBP5.74□□□□□ -1.49
PDH1YPR002W DON1Q05610 365 aa5.74□□□□□ -1.49
PDH1YPR002W BSC2Q05611 235 aa5.74□□□□□ -1.49
PDH1YPR002W RGA2Q06407 1009 aa5.74□□□□□ -1.49
PDH1YPR002W RRP15Q06511 250 aaPredicted RBP5.74□□□□□ -1.49
PDH1YPR002W RKM4Q12504 494 aa5.74□□□□□ -1.49
PDH1YPR002W THS1P04801 734 aaKnown RBP5.73□□□□□ -1.49
PDH1YPR002W PHR1P05066 565 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
PDH1YPR002W CDC33P07260 213 aaKnown RBP5.73□□□□□ -1.49
PDH1YPR002W PHO4P07270 312 aaKnown RBP5.73□□□□□ -1.49
PDH1YPR002W CHS2P14180 963 aa5.73□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms