RNA–Protein interactions for RNA: YPL106C

SSE1, Transcript of ATPase component of heat shock protein Hsp90 chaperone complex, yeast

Gene SSE1, Length 2,082 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSE1	YPL106C	RPS21B	Q3E754	87 aa	Known RBP	3	□□□□□ -1.93
SSE1	YPL106C	APM4	Q99186	491 aa		3	□□□□□ -1.93
SSE1	YPL106C	TOP1	P04786	769 aa		3	□□□□□ -1.93
SSE1	YPL106C	KAR1	P11927	433 aa		3	□□□□□ -1.93
SSE1	YPL106C	OAF3	P36023	863 aa		3	□□□□□ -1.93
SSE1	YPL106C	YKR075C	P36155	307 aa		3	□□□□□ -1.93
SSE1	YPL106C	VHR1	P40522	640 aa		3	□□□□□ -1.93
SSE1	YPL106C	PFA3	P42836	336 aa		3	□□□□□ -1.93
SSE1	YPL106C	ASI2	P53895	289 aa		3	□□□□□ -1.93
SSE1	YPL106C	SKY1	Q03656	742 aa		3	□□□□□ -1.93
SSE1	YPL106C	YDR132C	Q03900	495 aa		3	□□□□□ -1.93
SSE1	YPL106C	MUS81	Q04149	632 aa	Predicted RBP	3	□□□□□ -1.93
SSE1	YPL106C	ACK1	Q07622	623 aa	Predicted RBP	3	□□□□□ -1.93
SSE1	YPL106C	YOR378W	Q08902	515 aa		3	□□□□□ -1.93
SSE1	YPL106C	YPR027C	Q12079	277 aa		3	□□□□□ -1.93
SSE1	YPL106C	SWM1	Q12379	170 aa		3	□□□□□ -1.93
SSE1	YPL106C	NPC2	Q12408	173 aa		3	□□□□□ -1.93
SSE1	YPL106C	YML133C	Q03099	1374 aa		3	□□□□□ -1.93
SSE1	YPL106C	YLL067C	Q07888	1374 aa		3	□□□□□ -1.93
SSE1	YPL106C	YLL066C	Q99208	1374 aa		3	□□□□□ -1.93
SSE1	YPL106C	USO1	P25386	1790 aa		3	□□□□□ -1.93
SSE1	YPL106C	ATP4	P05626	244 aa		2.99	□□□□□ -1.93
SSE1	YPL106C	TUB3	P09734	445 aa	Known RBP	2.99	□□□□□ -1.93
SSE1	YPL106C	SEC65	P29478	273 aa		2.99	□□□□□ -1.93
SSE1	YPL106C	SEC21	P32074	935 aa	Known RBP	2.99	□□□□□ -1.93
SSE1	YPL106C	DAS1	P47005	663 aa		2.99	□□□□□ -1.93
SSE1	YPL106C	SPC105	P53148	917 aa		2.99	□□□□□ -1.93
SSE1	YPL106C	YBP2	P53169	641 aa		2.99	□□□□□ -1.93
SSE1	YPL106C	BRE5	P53741	515 aa	Known RBP	2.99	□□□□□ -1.93
SSE1	YPL106C	PKH1	Q03407	766 aa		2.99	□□□□□ -1.93
SSE1	YPL106C	ASM4	Q05166	528 aa		2.99	□□□□□ -1.93
SSE1	YPL106C	PHM6	Q05637	104 aa		2.99	□□□□□ -1.93
SSE1	YPL106C	NYV1	Q12255	253 aa		2.99	□□□□□ -1.93
SSE1	YPL106C	MPD2	Q99316	277 aa		2.99	□□□□□ -1.93
SSE1	YPL106C	CDC20	P26309	610 aa		2.99	□□□□□ -1.93
SSE1	YPL106C	HIR1	P32479	840 aa		2.99	□□□□□ -1.93
SSE1	YPL106C	NGG1	P32494	702 aa		2.99	□□□□□ -1.93
SSE1	YPL106C	MSS4	P38994	779 aa		2.99	□□□□□ -1.93
SSE1	YPL106C	EMP65	P40085	556 aa		2.99	□□□□□ -1.93
SSE1	YPL106C	SPT20	P50875	604 aa		2.99	□□□□□ -1.93
SSE1	YPL106C	SLD3	P53135	668 aa		2.99	□□□□□ -1.93
SSE1	YPL106C	KCS1	Q12494	1050 aa		2.99	□□□□□ -1.93
SSE1	YPL106C	SWI6	P09959	803 aa		2.98	□□□□□ -1.93
SSE1	YPL106C	SST2	P11972	698 aa	Known RBP	2.98	□□□□□ -1.93
SSE1	YPL106C	YEF3	P16521	1044 aa	Known RBP	2.98	□□□□□ -1.93
SSE1	YPL106C	COX11	P19516	300 aa	Known RBP	2.98	□□□□□ -1.93
SSE1	YPL106C	HEM12	P32347	362 aa	Predicted RBP	2.98	□□□□□ -1.93
SSE1	YPL106C	SER1	P33330	395 aa	Known RBP	2.98	□□□□□ -1.93
SSE1	YPL106C	FAT1	P38225	669 aa		2.98	□□□□□ -1.93
SSE1	YPL106C	SIC1	P38634	284 aa		2.98	□□□□□ -1.93
SSE1	YPL106C	YHR202W	P38887	602 aa		2.98	□□□□□ -1.93
SSE1	YPL106C	SET2	P46995	733 aa	Known RBP	2.98	□□□□□ -1.93
SSE1	YPL106C	RNR4	P49723	345 aa	Known RBP	2.98	□□□□□ -1.93
SSE1	YPL106C	LEE1	Q02799	301 aa	Known RBP	2.98	□□□□□ -1.93
SSE1	YPL106C	YLR224W	Q05947	369 aa		2.98	□□□□□ -1.93
SSE1	YPL106C	PEX19	Q07418	342 aa		2.98	□□□□□ -1.93
SSE1	YPL106C	PEX15	Q08215	383 aa		2.98	□□□□□ -1.93
SSE1	YPL106C	PSK1	P31374	1356 aa		2.98	□□□□□ -1.93
SSE1	YPL106C	PRP4	P20053	465 aa	Known RBP	2.97	□□□□□ -1.93
SSE1	YPL106C	HCA4	P20448	770 aa	Known RBP	2.97	□□□□□ -1.93
SSE1	YPL106C	AKL1	P38080	1108 aa	Known RBP	2.97	□□□□□ -1.93
SSE1	YPL106C	APN2	P38207	520 aa		2.97	□□□□□ -1.93
SSE1	YPL106C	BEM4	P39011	633 aa		2.97	□□□□□ -1.93
SSE1	YPL106C	PLB1	P39105	664 aa		2.97	□□□□□ -1.93
SSE1	YPL106C	PRP31	P49704	494 aa	Predicted RBP	2.97	□□□□□ -1.93
SSE1	YPL106C	YLR407W	Q06070	228 aa		2.97	□□□□□ -1.93
SSE1	YPL106C	MHP1	P43638	1398 aa		2.97	□□□□□ -1.93
SSE1	YPL106C	YLR415C	O13578	112 aa		2.97	□□□□□ -1.93
SSE1	YPL106C	TRM2	P33753	639 aa		2.97	□□□□□ -1.93
SSE1	YPL106C	NIC96	P34077	839 aa		2.97	□□□□□ -1.93
SSE1	YPL106C	YPT53	P36019	220 aa		2.97	□□□□□ -1.93
SSE1	YPL106C	TRZ1	P36159	838 aa	Predicted RBP	2.97	□□□□□ -1.93
SSE1	YPL106C	NOP15	P53927	220 aa	Predicted RBP	2.97	□□□□□ -1.93
SSE1	YPL106C	MET14	Q02196	202 aa		2.97	□□□□□ -1.93
SSE1	YPL106C	SLU7	Q02775	382 aa	Known RBP	2.97	□□□□□ -1.93
SSE1	YPL106C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	2.97	□□□□□ -1.93	not detected
SSE1	YPL106C	TRM11	Q12463	433 aa		2.97	□□□□□ -1.93
SSE1	YPL106C	GLN4	P13188	809 aa	Known RBP	2.96	□□□□□ -1.94
SSE1	YPL106C	ADE2	P21264	571 aa	Known RBP	2.96	□□□□□ -1.94
SSE1	YPL106C	YKU70	P32807	602 aa		2.96	□□□□□ -1.94
SSE1	YPL106C	APT2	P36973	181 aa		2.96	□□□□□ -1.94
SSE1	YPL106C	YBR259W	P38338	688 aa		2.96	□□□□□ -1.94
SSE1	YPL106C	RPP1	P38786	293 aa		2.96	□□□□□ -1.94
SSE1	YPL106C	GID8	P40208	455 aa		2.96	□□□□□ -1.94
SSE1	YPL106C	ARG5,6	Q01217	863 aa		2.96	□□□□□ -1.94
SSE1	YPL106C	YMR210W	Q03649	449 aa		2.96	□□□□□ -1.94
SSE1	YPL106C	ECM38	Q05902	660 aa	Predicted RBP	2.96	□□□□□ -1.94
SSE1	YPL106C	ADE6	P38972	1358 aa	Known RBP	2.96	□□□□□ -1.94
SSE1	YPL106C	CAD1	P24813	409 aa	Known RBP	2.96	□□□□□ -1.94
SSE1	YPL106C	KAR4	P25583	335 aa		2.96	□□□□□ -1.94
SSE1	YPL106C	IMG2	P25642	146 aa	Predicted RBP	2.96	□□□□□ -1.94
SSE1	YPL106C	CTF13	P35203	478 aa		2.96	□□□□□ -1.94
SSE1	YPL106C	APL2	P36000	726 aa	Predicted RBP	2.96	□□□□□ -1.94
SSE1	YPL106C	ECM1	P39715	212 aa		2.96	□□□□□ -1.94
SSE1	YPL106C	VID28	P40547	921 aa		2.96	□□□□□ -1.94
SSE1	YPL106C	PIP2	P52960	996 aa		2.96	□□□□□ -1.94
SSE1	YPL106C	PDS5	Q04264	1277 aa		2.96	□□□□□ -1.94
SSE1	YPL106C	MCM21	Q06675	368 aa		2.96	□□□□□ -1.94
SSE1	YPL106C	PUS9	Q12069	462 aa		2.96	□□□□□ -1.94
SSE1	YPL106C	RPS17A	P02407	136 aa	Known RBP	2.95	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 34.8 ms