RNA–Protein interactions for RNA: YOR373W

NUD1, Transcript of Component of the spindle pole body outer plaque, yeast

Gene NUD1, Length 2,556 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUD1	YOR373W	CCP1	P00431	361 aa		5.93	□□□□□ -1.46
NUD1	YOR373W	MBR1	P23493	339 aa		5.93	□□□□□ -1.46
NUD1	YOR373W	SEC21	P32074	935 aa	Known RBP	5.93	□□□□□ -1.46
NUD1	YOR373W	YKL023W	P36103	277 aa	Known RBP	5.93	□□□□□ -1.46
NUD1	YOR373W	VID24	P38263	362 aa		5.93	□□□□□ -1.46
NUD1	YOR373W	GGA2	P38817	585 aa	Known RBP	5.93	□□□□□ -1.46
NUD1	YOR373W	CTM1	P38818	585 aa		5.93	□□□□□ -1.46
NUD1	YOR373W	ENT3	P47160	408 aa		5.93	□□□□□ -1.46
NUD1	YOR373W	ASN1	P49089	572 aa	Known RBP	5.93	□□□□□ -1.46
NUD1	YOR373W	ALG11	P53954	548 aa	Known RBP	5.93	□□□□□ -1.46
NUD1	YOR373W	NSE5	Q03718	556 aa		5.93	□□□□□ -1.46
NUD1	YOR373W	RNH1	Q04740	348 aa		5.93	□□□□□ -1.46
NUD1	YOR373W	ALR1	Q08269	859 aa		5.93	□□□□□ -1.46
NUD1	YOR373W	NEW1	Q08972	1196 aa	Known RBP	5.93	□□□□□ -1.46
NUD1	YOR373W	YOR022C	Q12204	715 aa		5.93	□□□□□ -1.46
NUD1	YOR373W	RSA4	P25382	515 aa	Known RBP	5.92	□□□□□ -1.46
NUD1	YOR373W	ADK2	P26364	225 aa		5.92	□□□□□ -1.46
NUD1	YOR373W	CDC27	P38042	758 aa		5.92	□□□□□ -1.46
NUD1	YOR373W	FTR1	P40088	404 aa		5.92	□□□□□ -1.46
NUD1	YOR373W	CCT5	P40413	562 aa	Known RBP	5.92	□□□□□ -1.46
NUD1	YOR373W	TMA108	P40462	946 aa		5.92	□□□□□ -1.46
NUD1	YOR373W	CCM1	P48237	864 aa	Predicted RBP	5.92	□□□□□ -1.46
NUD1	YOR373W	INP52	P50942	1183 aa		5.92	□□□□□ -1.46
NUD1	YOR373W	YDR344C	Q05510	147 aa		5.92	□□□□□ -1.46
NUD1	YOR373W	PIG1	Q06216	648 aa		5.92	□□□□□ -1.46
NUD1	YOR373W	MRI1	Q06489	411 aa	Known RBP	5.92	□□□□□ -1.46
NUD1	YOR373W	YDL057W	Q07379	328 aa		5.92	□□□□□ -1.46
NUD1	YOR373W	GIS3	Q12418	502 aa		5.92	□□□□□ -1.46
NUD1	YOR373W	SPO16	P17122	198 aa		5.92	□□□□□ -1.46
NUD1	YOR373W	PPS1	P38148	807 aa		5.92	□□□□□ -1.46
NUD1	YOR373W	YBR284W	P38150	797 aa		5.92	□□□□□ -1.46
NUD1	YOR373W	TGL3	P40308	642 aa		5.92	□□□□□ -1.46
NUD1	YOR373W	ULP2	P40537	1034 aa	Predicted RBP	5.92	□□□□□ -1.46
NUD1	YOR373W	MAL11	P53048	616 aa		5.92	□□□□□ -1.46
NUD1	YOR373W	RFS1	P38234	210 aa	Known RBP	5.91	□□□□□ -1.46
NUD1	YOR373W	YHL041W	P38730	149 aa		5.91	□□□□□ -1.46
NUD1	YOR373W	COS5	P47187	383 aa		5.91	□□□□□ -1.46
NUD1	YOR373W	NBP1	P52919	319 aa	Predicted RBP	5.91	□□□□□ -1.46
NUD1	YOR373W	TOF1	P53840	1238 aa		5.91	□□□□□ -1.46
NUD1	YOR373W	ADA2	Q02336	434 aa		5.91	□□□□□ -1.46
NUD1	YOR373W	APN1	P22936	367 aa		5.91	□□□□□ -1.46
NUD1	YOR373W	TBS1	P38114	1094 aa		5.91	□□□□□ -1.46
NUD1	YOR373W	LRP1	P38801	184 aa	Known RBP	5.91	□□□□□ -1.46
NUD1	YOR373W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5.91	□□□□□ -1.46	not detected
NUD1	YOR373W	RSC58	Q07979	502 aa		5.91	□□□□□ -1.46
NUD1	YOR373W	KGD2	P19262	463 aa	Predicted RBP	5.9	□□□□□ -1.46
NUD1	YOR373W	ROX1	P25042	368 aa		5.9	□□□□□ -1.46
NUD1	YOR373W	PIM1	P36775	1133 aa		5.9	□□□□□ -1.46
NUD1	YOR373W	YBR184W	P38299	523 aa		5.9	□□□□□ -1.46
NUD1	YOR373W	EFM2	P38347	419 aa		5.9	□□□□□ -1.46
NUD1	YOR373W	NPR3	P38742	1146 aa		5.9	□□□□□ -1.46
NUD1	YOR373W	FAA3	P39002	694 aa		5.9	□□□□□ -1.46
NUD1	YOR373W	SAD1	P43589	448 aa		5.9	□□□□□ -1.46
NUD1	YOR373W	ESC8	Q08119	714 aa		5.9	□□□□□ -1.46
NUD1	YOR373W	OSH2	Q12451	1283 aa		5.9	□□□□□ -1.46
NUD1	YOR373W	PET123	P17558	318 aa		5.9	□□□□□ -1.47
NUD1	YOR373W	CCL1	P37366	393 aa		5.9	□□□□□ -1.47
NUD1	YOR373W	RGD1	P38339	666 aa		5.9	□□□□□ -1.47
NUD1	YOR373W	POP2	P39008	433 aa		5.9	□□□□□ -1.47
NUD1	YOR373W	GPP2	P40106	250 aa	Known RBP	5.9	□□□□□ -1.47
NUD1	YOR373W	GCD10	P41814	478 aa		5.9	□□□□□ -1.47
NUD1	YOR373W	ORC5	P50874	479 aa		5.9	□□□□□ -1.47
NUD1	YOR373W	KXD1	P53158	218 aa		5.9	□□□□□ -1.47
NUD1	YOR373W	FAP7	Q12055	197 aa	Predicted RBP	5.9	□□□□□ -1.47
NUD1	YOR373W	NCR1	Q12200	1170 aa		5.9	□□□□□ -1.47
NUD1	YOR373W	RRP36	Q12481	300 aa	Predicted RBP	5.9	□□□□□ -1.47
NUD1	YOR373W	GAL80	P04387	435 aa		5.89	□□□□□ -1.47
NUD1	YOR373W	NIP100	P33420	868 aa		5.89	□□□□□ -1.47
NUD1	YOR373W	PXA2	P34230	853 aa		5.89	□□□□□ -1.47
NUD1	YOR373W	ERC1	P38767	581 aa		5.89	□□□□□ -1.47
NUD1	YOR373W	KAP123	P40069	1113 aa	Known RBP	5.89	□□□□□ -1.47
NUD1	YOR373W	RET2	P43621	546 aa		5.89	□□□□□ -1.47
NUD1	YOR373W	SUM1	P46676	1062 aa		5.89	□□□□□ -1.47
NUD1	YOR373W	SAE2	P46946	345 aa		5.89	□□□□□ -1.47
NUD1	YOR373W	FYV8	P46949	817 aa	Known RBP	5.89	□□□□□ -1.47
NUD1	YOR373W	RPA49	Q01080	415 aa	Predicted RBP	5.89	□□□□□ -1.47
NUD1	YOR373W	RCR2	Q03446	210 aa	Known RBP	5.89	□□□□□ -1.47
NUD1	YOR373W	APC11	Q12157	165 aa		5.89	□□□□□ -1.47
NUD1	YOR373W	PKH2	Q12236	1081 aa	Known RBP	5.89	□□□□□ -1.47
NUD1	YOR373W	SCM3	Q12334	223 aa		5.89	□□□□□ -1.47
NUD1	YOR373W	TSC13	Q99190	310 aa		5.89	□□□□□ -1.47
NUD1	YOR373W	ASP3-2	P0CX77	362 aa		5.89	□□□□□ -1.47
NUD1	YOR373W	ASP3-3	P0CX78	362 aa		5.89	□□□□□ -1.47
NUD1	YOR373W	ASP3-4	P0CX79	362 aa		5.89	□□□□□ -1.47
NUD1	YOR373W	ASP3-1	P0CZ17	362 aa		5.89	□□□□□ -1.47
NUD1	YOR373W	HMG2	P12684	1045 aa		5.89	□□□□□ -1.47
NUD1	YOR373W	COX11	P19516	300 aa	Known RBP	5.89	□□□□□ -1.47
NUD1	YOR373W	MUD1	P32605	298 aa	Known RBP	5.89	□□□□□ -1.47
NUD1	YOR373W	LCB2	P40970	561 aa		5.89	□□□□□ -1.47
NUD1	YOR373W	YML6	P51998	286 aa		5.89	□□□□□ -1.47
NUD1	YOR373W	RTA1	P53047	317 aa		5.89	□□□□□ -1.47
NUD1	YOR373W	YLR001C	Q07895	862 aa		5.89	□□□□□ -1.47
NUD1	YOR373W	TRE2	Q08693	809 aa		5.89	□□□□□ -1.47
NUD1	YOR373W	HSP60	P19882	572 aa	Known RBP	5.88	□□□□□ -1.47
NUD1	YOR373W	PGS1	P25578	521 aa		5.88	□□□□□ -1.47
NUD1	YOR373W	CSE2	P33308	149 aa		5.88	□□□□□ -1.47
NUD1	YOR373W	NUT1	P53114	1132 aa		5.88	□□□□□ -1.47
NUD1	YOR373W	TIM8	P57744	87 aa		5.88	□□□□□ -1.47
NUD1	YOR373W	SPP1	Q03012	353 aa		5.88	□□□□□ -1.47
NUD1	YOR373W	TIF35	Q04067	274 aa	Known RBP	5.88	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 141.7 ms