RNA–Protein interactions for RNA: YMR139W

RIM11, Transcript of Protein kinase, yeast

Gene RIM11, Length 1,113 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM11	YMR139W	RPN10	P38886	268 aa	Known RBP	4.02	□□□□□ -1.77
RIM11	YMR139W	RPN11	P43588	306 aa	Known RBP	4.02	□□□□□ -1.77
RIM11	YMR139W	WAR1	Q03631	944 aa		4.02	□□□□□ -1.77
RIM11	YMR139W	THI7	Q05998	598 aa		4.02	□□□□□ -1.77
RIM11	YMR139W	FKS1	P38631	1876 aa	Known RBP	4.02	□□□□□ -1.77
RIM11	YMR139W	MET3	P08536	511 aa		4.01	□□□□□ -1.77
RIM11	YMR139W	CDC43	P18898	376 aa		4.01	□□□□□ -1.77
RIM11	YMR139W	COQ1	P18900	473 aa		4.01	□□□□□ -1.77
RIM11	YMR139W	MGM1	P32266	881 aa		4.01	□□□□□ -1.77
RIM11	YMR139W	FLO10	P36170	1169 aa		4.01	□□□□□ -1.77
RIM11	YMR139W	GRX7	P38068	203 aa		4.01	□□□□□ -1.77
RIM11	YMR139W	RRP8	P38961	392 aa	Known RBP	4.01	□□□□□ -1.77
RIM11	YMR139W	NOC2	P39744	710 aa	Known RBP	4.01	□□□□□ -1.77
RIM11	YMR139W	NUG1	P40010	520 aa	Known RBP	4.01	□□□□□ -1.77
RIM11	YMR139W	YIR042C	P40586	236 aa		4.01	□□□□□ -1.77
RIM11	YMR139W	TAH11	P47112	604 aa		4.01	□□□□□ -1.77
RIM11	YMR139W	GLO1	P50107	326 aa		4.01	□□□□□ -1.77
RIM11	YMR139W	RAI1	P53063	387 aa	Known RBP	4.01	□□□□□ -1.77
RIM11	YMR139W	SEC5	P89102	971 aa		4.01	□□□□□ -1.77
RIM11	YMR139W	DLT1	Q04216	342 aa		4.01	□□□□□ -1.77
RIM11	YMR139W	INM2	Q05533	292 aa		4.01	□□□□□ -1.77
RIM11	YMR139W	DCS2	Q12123	353 aa		4.01	□□□□□ -1.77
RIM11	YMR139W	BUG1	Q12191	341 aa		4.01	□□□□□ -1.77
RIM11	YMR139W	CYB2	P00175	591 aa		4	□□□□□ -1.77
RIM11	YMR139W	CHO2	P05374	869 aa	Known RBP	4	□□□□□ -1.77
RIM11	YMR139W	RPL22A	P05749	121 aa	Known RBP	4	□□□□□ -1.77
RIM11	YMR139W	SWI4	P25302	1093 aa	Known RBP	4	□□□□□ -1.77
RIM11	YMR139W	URA1	P28272	314 aa	Predicted RBP	4	□□□□□ -1.77
RIM11	YMR139W	BMH2	P34730	273 aa	Known RBP	4	□□□□□ -1.77
RIM11	YMR139W	PSY4	P38193	441 aa		4	□□□□□ -1.77
RIM11	YMR139W	TCD1	P38756	429 aa		4	□□□□□ -1.77
RIM11	YMR139W	NPR2	P39923	615 aa		4	□□□□□ -1.77
RIM11	YMR139W	ELO3	P40319	345 aa		4	□□□□□ -1.77
RIM11	YMR139W	TFG2	P41896	400 aa	Predicted RBP	4	□□□□□ -1.77
RIM11	YMR139W	YJR107W	P47145	328 aa		4	□□□□□ -1.77
RIM11	YMR139W	VPS73	P53142	486 aa	Known RBP	4	□□□□□ -1.77
RIM11	YMR139W	HDA1	P53973	706 aa		4	□□□□□ -1.77
RIM11	YMR139W	YLR225C	Q05948	407 aa	Known RBP	4	□□□□□ -1.77
RIM11	YMR139W	TFC6	Q06339	672 aa		4	□□□□□ -1.77
RIM11	YMR139W	DIB1	Q06819	143 aa	Predicted RBP	4	□□□□□ -1.77
RIM11	YMR139W	CTI6	Q08923	506 aa		4	□□□□□ -1.77
RIM11	YMR139W	GET3	Q12154	354 aa	Known RBP	4	□□□□□ -1.77
RIM11	YMR139W	SFI1	Q12369	946 aa		4	□□□□□ -1.77
RIM11	YMR139W	MET6	P05694	767 aa	Known RBP	3.99	□□□□□ -1.77
RIM11	YMR139W	VPS1	P21576	704 aa	Known RBP	3.99	□□□□□ -1.77
RIM11	YMR139W	SEC21	P32074	935 aa	Known RBP	3.99	□□□□□ -1.77
RIM11	YMR139W	ASF1	P32447	279 aa		3.99	□□□□□ -1.77
RIM11	YMR139W	MYO3	P36006	1272 aa		3.99	□□□□□ -1.77
RIM11	YMR139W	SPL2	P38839	148 aa		3.99	□□□□□ -1.77
RIM11	YMR139W	CEP3	P40969	608 aa		3.99	□□□□□ -1.77
RIM11	YMR139W	CUE3	P53137	624 aa	Known RBP	3.99	□□□□□ -1.77
RIM11	YMR139W	RPS15	Q01855	142 aa	Known RBP	3.99	□□□□□ -1.77
RIM11	YMR139W	SYF1	Q04048	859 aa	Predicted RBP	3.99	□□□□□ -1.77
RIM11	YMR139W	CDC15	P27636	974 aa		3.98	□□□□□ -1.77
RIM11	YMR139W	RPC82	P32349	654 aa		3.98	□□□□□ -1.77
RIM11	YMR139W	SPC110	P32380	944 aa		3.98	□□□□□ -1.77
RIM11	YMR139W	ANP1	P32629	500 aa		3.98	□□□□□ -1.77
RIM11	YMR139W	LTV1	P34078	463 aa		3.98	□□□□□ -1.77
RIM11	YMR139W	CTF13	P35203	478 aa		3.98	□□□□□ -1.77
RIM11	YMR139W	PTK1	P36002	662 aa	Predicted RBP	3.98	□□□□□ -1.77
RIM11	YMR139W	RXT2	P38255	430 aa		3.98	□□□□□ -1.77
RIM11	YMR139W	PCL5	P38794	229 aa		3.98	□□□□□ -1.77
RIM11	YMR139W	CSM2	P40465	213 aa		3.98	□□□□□ -1.77
RIM11	YMR139W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.98	□□□□□ -1.77	not detected
RIM11	YMR139W	RPT4	P53549	437 aa	Known RBP	3.98	□□□□□ -1.77
RIM11	YMR139W	VPS75	P53853	264 aa		3.98	□□□□□ -1.77
RIM11	YMR139W	SRP1	Q02821	542 aa	Known RBP	3.98	□□□□□ -1.77
RIM11	YMR139W	EEB1	Q02891	456 aa		3.98	□□□□□ -1.77
RIM11	YMR139W	GDE1	Q02979	1223 aa		3.98	□□□□□ -1.77
RIM11	YMR139W	IRC4	Q03036	179 aa		3.98	□□□□□ -1.77
RIM11	YMR139W	SSL1	Q04673	461 aa	Predicted RBP	3.98	□□□□□ -1.77
RIM11	YMR139W	GFD1	Q04839	188 aa	Known RBP	3.98	□□□□□ -1.77
RIM11	YMR139W	ADY4	Q05955	493 aa		3.98	□□□□□ -1.77
RIM11	YMR139W	COG4	Q06096	861 aa		3.98	□□□□□ -1.77
RIM11	YMR139W	RIX7	Q07844	837 aa	Known RBP	3.98	□□□□□ -1.77
RIM11	YMR139W	TMA16	Q08687	178 aa		3.98	□□□□□ -1.77
RIM11	YMR139W	APL4	Q12028	832 aa		3.98	□□□□□ -1.77
RIM11	YMR139W	CAF20	P12962	161 aa	Known RBP	3.97	□□□□□ -1.77
RIM11	YMR139W	PHO13	P19881	312 aa		3.97	□□□□□ -1.77
RIM11	YMR139W	RNR3	P21672	869 aa	Known RBP	3.97	□□□□□ -1.77
RIM11	YMR139W	KIN3	P22209	435 aa		3.97	□□□□□ -1.77
RIM11	YMR139W	MAK31	P23059	88 aa		3.97	□□□□□ -1.77
RIM11	YMR139W	MCM3	P24279	971 aa	Known RBP	3.97	□□□□□ -1.77
RIM11	YMR139W	LCB1	P25045	558 aa	Known RBP	3.97	□□□□□ -1.77
RIM11	YMR139W	BMH1	P29311	267 aa	Known RBP	3.97	□□□□□ -1.77
RIM11	YMR139W	SAC6	P32599	642 aa	Known RBP	3.97	□□□□□ -1.77
RIM11	YMR139W	RPT3	P33298	428 aa	Known RBP	3.97	□□□□□ -1.77
RIM11	YMR139W	ADE17	P38009	592 aa	Known RBP	3.97	□□□□□ -1.77
RIM11	YMR139W	MAL31	P38156	614 aa		3.97	□□□□□ -1.77
RIM11	YMR139W	RTS1	P38903	757 aa		3.97	□□□□□ -1.77
RIM11	YMR139W	OSW7	P43611	510 aa		3.97	□□□□□ -1.77
RIM11	YMR139W	VPS60	Q03390	229 aa		3.97	□□□□□ -1.77
RIM11	YMR139W	HCR1	Q05775	265 aa	Known RBP	3.97	□□□□□ -1.77
RIM11	YMR139W	CRR1	Q05790	422 aa		3.97	□□□□□ -1.77
RIM11	YMR139W	MRD1	Q06106	887 aa	Known RBP	3.97	□□□□□ -1.77
RIM11	YMR139W	MMR1	Q06324	491 aa		3.97	□□□□□ -1.77
RIM11	YMR139W	YCG1	Q06680	1035 aa		3.97	□□□□□ -1.77
RIM11	YMR139W	YOR111W	Q99210	232 aa		3.97	□□□□□ -1.77
RIM11	YMR139W	QCR6	P00127	147 aa		3.96	□□□□□ -1.78
RIM11	YMR139W	HIS4	P00815	799 aa	Known RBP	3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 36.2 ms