RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W KSP1P38691 1029 aaKnown RBP3.62□□□□□ -1.83
CTK3YML112W KHA1P40309 873 aa3.62□□□□□ -1.83
CTK3YML112W YIL077CP40508 320 aa3.62□□□□□ -1.83
CTK3YML112W MPS3P47069 682 aa3.62□□□□□ -1.83
CTK3YML112W BFA1P47113 574 aa3.62□□□□□ -1.83
CTK3YML112W RFX1P48743 811 aa3.62□□□□□ -1.83
CTK3YML112W SDA1P53313 767 aaKnown RBP3.62□□□□□ -1.83
CTK3YML112W SPC98P53540 846 aa3.62□□□□□ -1.83
CTK3YML112W YNL162W-AQ3E7A8 72 aa3.62□□□□□ -1.83
CTK3YML112W IMG2P25642 146 aaPredicted RBP3.61□□□□□ -1.83
CTK3YML112W PET127P32606 800 aa3.61□□□□□ -1.83
CTK3YML112W CTP1P38152 299 aa3.61□□□□□ -1.83
CTK3YML112W COS111P38308 924 aa3.61□□□□□ -1.83
CTK3YML112W PAC2P39937 518 aa3.61□□□□□ -1.83
CTK3YML112W BIT61P47041 543 aa3.61□□□□□ -1.83
CTK3YML112W NMA2P53204 395 aa3.61□□□□□ -1.83
CTK3YML112W DNM1P54861 757 aa3.61□□□□□ -1.83
CTK3YML112W YMR210WQ03649 449 aa3.61□□□□□ -1.83
CTK3YML112W YFT2Q06676 274 aa3.61□□□□□ -1.83
CTK3YML112W KIN82P25341 720 aa3.6□□□□□ -1.83
CTK3YML112W CKB2P38930 258 aa3.6□□□□□ -1.83
CTK3YML112W MNN1P39106 762 aa3.6□□□□□ -1.83
CTK3YML112W VBA4Q04602 768 aaKnown RBP3.6□□□□□ -1.83
CTK3YML112W THI7Q05998 598 aa3.6□□□□□ -1.83
CTK3YML112W YLR407WQ06070 228 aa3.6□□□□□ -1.83
CTK3YML112W NTH1P32356 751 aa3.59□□□□□ -1.83
CTK3YML112W MSS1P32559 526 aaPredicted RBP3.59□□□□□ -1.83
CTK3YML112W YKU70P32807 602 aa3.59□□□□□ -1.83
CTK3YML112W APL3P38065 1025 aa3.59□□□□□ -1.83
CTK3YML112W YMC2P38087 329 aa3.59□□□□□ -1.83
CTK3YML112W MUP3P38734 546 aa3.59□□□□□ -1.83
CTK3YML112W TDA3P38758 523 aa3.59□□□□□ -1.83
CTK3YML112W YSH1Q06224 779 aaPredicted RBP3.59□□□□□ -1.83
CTK3YML112W RPS9BP05755 195 aaKnown RBP3.58□□□□□ -1.84
CTK3YML112W MDM10P18409 493 aa3.58□□□□□ -1.84
CTK3YML112W RPA135P22138 1203 aaKnown RBP3.58□□□□□ -1.84
CTK3YML112W NMD2P38798 1089 aaKnown RBP3.58□□□□□ -1.84
CTK3YML112W RET2P43621 546 aa3.58□□□□□ -1.84
CTK3YML112W YJR096WP47137 282 aa3.58□□□□□ -1.84
CTK3YML112W HLJ1P48353 224 aa3.58□□□□□ -1.84
CTK3YML112W MRK1P50873 501 aa3.58□□□□□ -1.84
CTK3YML112W DIP5P53388 608 aa3.58□□□□□ -1.84
CTK3YML112W RCR2Q03446 210 aaKnown RBP3.58□□□□□ -1.84
CTK3YML112W SLK19Q08581 821 aaKnown RBP3.58□□□□□ -1.84
CTK3YML112W BMS1Q08965 1183 aaKnown RBP3.58□□□□□ -1.84
CTK3YML112W ADR1P07248 1323 aa3.58□□□□□ -1.84
CTK3YML112W LAM4P38800 1345 aa3.58□□□□□ -1.84
CTK3YML112W STE12P13574 688 aa3.57□□□□□ -1.84
CTK3YML112W VPS34P22543 875 aa3.57□□□□□ -1.84
CTK3YML112W PRP22P24384 1145 aaKnown RBP3.57□□□□□ -1.84
CTK3YML112W MIT1P40002 666 aa3.57□□□□□ -1.84
CTK3YML112W PXA1P41909 870 aa3.57□□□□□ -1.84
CTK3YML112W UTP14Q04500 899 aaKnown RBP3.57□□□□□ -1.84
CTK3YML112W YPS7Q06325 596 aa3.57□□□□□ -1.84
CTK3YML112W MRI1Q06489 411 aaKnown RBP3.57□□□□□ -1.84
CTK3YML112W RKI1Q12189 258 aa3.57□□□□□ -1.84
CTK3YML112W PHO5P00635 467 aa3.56□□□□□ -1.84
CTK3YML112W SWI6P09959 803 aa3.56□□□□□ -1.84
CTK3YML112W IME1P21190 360 aa3.56□□□□□ -1.84
CTK3YML112W SAT4P25333 603 aaKnown RBP3.56□□□□□ -1.84
CTK3YML112W PRP19P32523 503 aaKnown RBP3.56□□□□□ -1.84
CTK3YML112W TYS1P36421 394 aaKnown RBP3.56□□□□□ -1.84
CTK3YML112W PMC1P38929 1173 aaPredicted RBP3.56□□□□□ -1.84
CTK3YML112W BUD8P41698 603 aa3.56□□□□□ -1.84
CTK3YML112W HOF1Q05080 669 aa3.56□□□□□ -1.84
CTK3YML112W THI73Q07904 523 aa3.56□□□□□ -1.84
CTK3YML112W IZH3Q07959 543 aa3.56□□□□□ -1.84
CTK3YML112W ADE5,7P07244 802 aaKnown RBP3.55□□□□□ -1.84
CTK3YML112W HOM2P13663 365 aaKnown RBP3.55□□□□□ -1.84
CTK3YML112W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
CTK3YML112W ELF1P36053 145 aa3.55□□□□□ -1.84
CTK3YML112W CCT5P40413 562 aaKnown RBP3.55□□□□□ -1.84
CTK3YML112W ASN1P49089 572 aaKnown RBP3.55□□□□□ -1.84
CTK3YML112W UFO1Q04511 668 aa3.55□□□□□ -1.84
CTK3YML112W STP4Q07351 490 aa3.55□□□□□ -1.84
CTK3YML112W MDM20Q12387 796 aaKnown RBP3.55□□□□□ -1.84
CTK3YML112W RPS21BQ3E754 87 aaKnown RBP3.55□□□□□ -1.84
CTK3YML112W RPS17AP02407 136 aaKnown RBP3.54□□□□□ -1.84
CTK3YML112W RPS17BP14127 136 aaKnown RBP3.54□□□□□ -1.84
CTK3YML112W ORC2P32833 620 aa3.54□□□□□ -1.84
CTK3YML112W UGP1P32861 499 aaKnown RBP3.54□□□□□ -1.84
CTK3YML112W PMT6P42934 759 aa3.54□□□□□ -1.84
CTK3YML112W YGR153WP48238 217 aa3.54□□□□□ -1.84
CTK3YML112W SNF12P53628 566 aa3.54□□□□□ -1.84
CTK3YML112W NOP15P53927 220 aaPredicted RBP3.54□□□□□ -1.84
CTK3YML112W NGL2Q03264 515 aaKnown RBP3.54□□□□□ -1.84
CTK3YML112W MTQ2Q03920 221 aaPredicted RBP3.54□□□□□ -1.84
CTK3YML112W OSW1Q08692 278 aa3.54□□□□□ -1.84
CTK3YML112W SEC65P29478 273 aa3.53□□□□□ -1.84
CTK3YML112W YMC1P32331 307 aa3.53□□□□□ -1.84
CTK3YML112W HXT6P39003 570 aaKnown RBP3.53□□□□□ -1.84
CTK3YML112W HXT7P39004 570 aa3.53□□□□□ -1.84
CTK3YML112W DUN1P39009 513 aa3.53□□□□□ -1.84
CTK3YML112W TMN3P40071 706 aa3.53□□□□□ -1.84
CTK3YML112W ECM9Q02202 377 aa3.53□□□□□ -1.84
CTK3YML112W FMP30Q02883 468 aa3.53□□□□□ -1.84
CTK3YML112W PPN1Q04119 674 aa3.53□□□□□ -1.84
CTK3YML112W TPK2P06245 380 aa3.52□□□□□ -1.85
CTK3YML112W PRE4P30657 266 aa3.52□□□□□ -1.85
CTK3YML112W GZF3P42944 551 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms