RNA–Protein interactions for RNA: YLR398C

SKI2, Transcript of Ski complex component and putative RNA helicase, yeastyeast

Gene SKI2, Length 3,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI2YLR398C PAC11P40960 533 aa6.4□□□□□ -1.39
SKI2YLR398C VPS16Q03308 798 aa6.4□□□□□ -1.39
SKI2YLR398C CFT2Q12102 859 aaPredicted RBP6.4□□□□□ -1.39
SKI2YLR398C COX6P00427 148 aa6.39□□□□□ -1.39
SKI2YLR398C RSR1P13856 272 aa6.39□□□□□ -1.39
SKI2YLR398C DBP5P20449 482 aaKnown RBP6.39□□□□□ -1.39
SKI2YLR398C UBA1P22515 1024 aaKnown RBP6.39□□□□□ -1.39
SKI2YLR398C SLA2P33338 968 aa6.39□□□□□ -1.39
SKI2YLR398C SPC34P36131 295 aa6.39□□□□□ -1.39
SKI2YLR398C GLG1P36143 616 aa6.39□□□□□ -1.39
SKI2YLR398C MRPL36P36531 177 aa6.39□□□□□ -1.39
SKI2YLR398C OAF1P39720 1047 aaPredicted RBP6.39□□□□□ -1.39
SKI2YLR398C DIG1Q03063 452 aaKnown RBP6.39□□□□□ -1.39
SKI2YLR398C CLU1Q03690 1277 aaKnown RBP6.39□□□□□ -1.39
SKI2YLR398C SPC2Q04969 178 aa6.39□□□□□ -1.39
SKI2YLR398C RGA2Q06407 1009 aa6.39□□□□□ -1.39
SKI2YLR398C MCP2Q06567 569 aa6.39□□□□□ -1.39
SKI2YLR398C YBR298C-AQ8TGK4 73 aa6.39□□□□□ -1.39
SKI2YLR398C RPL24BP24000 155 aaKnown RBP6.39□□□□□ -1.39
SKI2YLR398C GFD2P25370 566 aaKnown RBP6.39□□□□□ -1.39
SKI2YLR398C MDJ1P35191 511 aa6.39□□□□□ -1.39
SKI2YLR398C GUP1P53154 560 aa6.39□□□□□ -1.39
SKI2YLR398C ADE12P80210 433 aaKnown RBP6.39□□□□□ -1.39
SKI2YLR398C CWC15Q03772 175 aaKnown RBP6.39□□□□□ -1.39
SKI2YLR398C LOT6Q07923 191 aa6.39□□□□□ -1.39
SKI2YLR398C TCB1Q12466 1186 aa6.39□□□□□ -1.39
SKI2YLR398C LAG2Q92325 660 aa6.39□□□□□ -1.39
SKI2YLR398C PRP9P19736 530 aaKnown RBP6.39□□□□□ -1.39
SKI2YLR398C REB1P21538 810 aa6.39□□□□□ -1.39
SKI2YLR398C VPS51P36116 164 aa6.39□□□□□ -1.39
SKI2YLR398C MSG5P38590 489 aa6.39□□□□□ -1.39
SKI2YLR398C SET5P38890 526 aaKnown RBP6.39□□□□□ -1.39
SKI2YLR398C SEC31P38968 1273 aaKnown RBP6.39□□□□□ -1.39
SKI2YLR398C SPF1P39986 1215 aaKnown RBP6.39□□□□□ -1.39
SKI2YLR398C STB2P46679 850 aa6.39□□□□□ -1.39
SKI2YLR398C ORC3P54790 616 aa6.39□□□□□ -1.39
SKI2YLR398C CUS1Q02554 436 aaPredicted RBP6.39□□□□□ -1.39
SKI2YLR398C SWA2Q06677 668 aa6.39□□□□□ -1.39
SKI2YLR398C SOG2Q08817 791 aa6.39□□□□□ -1.39
SKI2YLR398C YPR204WQ08995 1032 aa6.39□□□□□ -1.39
SKI2YLR398C WHI5Q12416 295 aa6.39□□□□□ -1.39
SKI2YLR398C CHO2P05374 869 aaKnown RBP6.38□□□□□ -1.39
SKI2YLR398C YML002WP0CF17 737 aa6.38□□□□□ -1.39
SKI2YLR398C STE11P23561 717 aa6.38□□□□□ -1.39
SKI2YLR398C KRE2P27809 442 aa6.38□□□□□ -1.39
SKI2YLR398C NUP2P32499 720 aa6.38□□□□□ -1.39
SKI2YLR398C HCS1P34243 683 aa6.38□□□□□ -1.39
SKI2YLR398C PCI8P40512 444 aa6.38□□□□□ -1.39
SKI2YLR398C ULP2P40537 1034 aaPredicted RBP6.38□□□□□ -1.39
SKI2YLR398C PAN2P53010 1115 aaPredicted RBP6.38□□□□□ -1.39
SKI2YLR398C TEP1P53916 434 aa6.38□□□□□ -1.39
SKI2YLR398C YPL260WQ08977 551 aa6.38□□□□□ -1.39
SKI2YLR398C SLF1Q12034 447 aaKnown RBP6.38□□□□□ -1.39
SKI2YLR398C MF(ALPHA)1P01149 165 aa6.38□□□□□ -1.39
SKI2YLR398C PRP6P19735 899 aaPredicted RBP6.38□□□□□ -1.39
SKI2YLR398C UBC8P28263 218 aa6.38□□□□□ -1.39
SKI2YLR398C SAC1P32368 623 aaKnown RBP6.38□□□□□ -1.39
SKI2YLR398C RXT2P38255 430 aa6.38□□□□□ -1.39
SKI2YLR398C SMF2P38778 549 aa6.38□□□□□ -1.39
SKI2YLR398C FTR1P40088 404 aa6.38□□□□□ -1.39
SKI2YLR398C EMC2P47133 292 aaKnown RBP6.38□□□□□ -1.39
SKI2YLR398C SHR3Q02774 210 aa6.38□□□□□ -1.39
SKI2YLR398C YMR027WQ04371 470 aa6.38□□□□□ -1.39
SKI2YLR398C CDC53Q12018 815 aaKnown RBP6.38□□□□□ -1.39
SKI2YLR398C WRS1Q12109 432 aaKnown RBP6.38□□□□□ -1.39
SKI2YLR398C HIF1Q12373 385 aa6.38□□□□□ -1.39
SKI2YLR398C MET6P05694 767 aaKnown RBP6.38□□□□□ -1.39
SKI2YLR398C HSP60P19882 572 aaKnown RBP6.38□□□□□ -1.39
SKI2YLR398C CRG1P38892 291 aaRIP-Chip data6.38□□□□□ -1.39 RIP-Chip
SKI2YLR398C LCP5P40079 357 aaPredicted RBP6.38□□□□□ -1.39
SKI2YLR398C DAN4P47179 1161 aa6.38□□□□□ -1.39
SKI2YLR398C ASI3P53983 676 aa6.38□□□□□ -1.39
SKI2YLR398C PKH3Q03306 898 aaPredicted RBP6.38□□□□□ -1.39
SKI2YLR398C MPH3P0CE00 602 aa6.37□□□□□ -1.39
SKI2YLR398C HXT3P32466 567 aaKnown RBP6.37□□□□□ -1.39
SKI2YLR398C GRX7P38068 203 aa6.37□□□□□ -1.39
SKI2YLR398C BFR1P38934 470 aaKnown RBP RIP-Chip data6.37□□□□□ -1.39not detected
SKI2YLR398C INP51P40559 946 aaKnown RBP6.37□□□□□ -1.39
SKI2YLR398C HXT15P54854 567 aa6.37□□□□□ -1.39
SKI2YLR398C CTF4Q01454 927 aa6.37□□□□□ -1.39
SKI2YLR398C RSC4Q02206 625 aa6.37□□□□□ -1.39
SKI2YLR398C ABP140Q08641 628 aaKnown RBP6.37□□□□□ -1.39
SKI2YLR398C GPR1Q12361 961 aa6.37□□□□□ -1.39
SKI2YLR398C YAK1P14680 807 aa6.37□□□□□ -1.39
SKI2YLR398C YKL133CP36066 463 aa6.37□□□□□ -1.39
SKI2YLR398C NCL1P38205 684 aaKnown RBP6.37□□□□□ -1.39
SKI2YLR398C RIC1P40395 1056 aa6.37□□□□□ -1.39
SKI2YLR398C CSN9Q03981 162 aa6.37□□□□□ -1.39
SKI2YLR398C RPN9Q04062 393 aaKnown RBP6.37□□□□□ -1.39
SKI2YLR398C TAH18Q12181 623 aa6.37□□□□□ -1.39
SKI2YLR398C TSC13Q99190 310 aa6.37□□□□□ -1.39
SKI2YLR398C SEN2P16658 377 aa6.37□□□□□ -1.39
SKI2YLR398C COQ1P18900 473 aa6.37□□□□□ -1.39
SKI2YLR398C MRP8P35719 219 aa6.37□□□□□ -1.39
SKI2YLR398C DIA4P38705 446 aaPredicted RBP6.37□□□□□ -1.39
SKI2YLR398C SLX8P40072 274 aa6.37□□□□□ -1.39
SKI2YLR398C SYG1P40528 902 aa6.37□□□□□ -1.39
SKI2YLR398C SNL1P40548 159 aa6.37□□□□□ -1.39
SKI2YLR398C ALA1P40825 983 aaKnown RBP6.37□□□□□ -1.39
SKI2YLR398C FMP32P43557 207 aa6.37□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms